ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52089:52116

Extra

PDB:
ATOM 1 O3' C A2088 194.120 9.880 232.182 1.00 37.00 O
ATOM 2 P C A2089 194.264 10.640 233.574 1.00 42.50 P
ATOM 3 OP1 C A2089 194.543 12.018 233.259 1.00 42.59 O
ATOM 4 OP2 C A2089 195.232 9.892 234.400 1.00 42.59 O
ATOM 5 O5' C A2089 192.818 10.538 234.200 1.00 42.16 O
ATOM 6 C5' C A2089 191.758 10.022 233.448 1.00 42.06 C
ATOM 7 C4' C A2089 190.860 9.195 234.292 1.00 41.80 C
ATOM 8 O4' C A2089 191.352 7.844 234.403 1.00 41.90 O
ATOM 9 C3' C A2089 190.692 9.654 235.708 1.00 41.61 C
ATOM 10 O3' C A2089 189.829 10.734 235.715 1.00 41.46 O
ATOM 11 C2' C A2089 190.125 8.415 236.358 1.00 41.46 C
ATOM 12 O2' C A2089 188.733 8.321 236.070 1.00 41.26 O
ATOM 13 C1' C A2089 190.885 7.289 235.594 1.00 41.69 C
ATOM 14 N1 C A2089 192.069 6.738 236.347 1.00 41.83 N
ATOM 15 C2 C A2089 191.726 5.878 237.331 1.00 41.69 C
ATOM 16 O2 C A2089 190.570 5.744 237.387 1.00 41.49 O
ATOM 17 N3 C A2089 192.534 5.226 238.141 1.00 41.77 N
ATOM 18 C4 C A2089 193.813 5.417 237.947 1.00 42.02 C
ATOM 19 N4 C A2089 194.530 4.721 238.849 1.00 42.09 N
ATOM 20 C5 C A2089 194.359 6.291 236.908 1.00 42.21 C
ATOM 21 C6 C A2089 193.442 6.927 236.134 1.00 42.10 C
ATOM 22 P A A2090 189.265 11.482 237.025 1.00 36.51 P
ATOM 23 OP1 A A2090 188.886 12.766 236.499 1.00 36.50 O
ATOM 24 OP2 A A2090 190.234 11.403 238.121 1.00 36.56 O
ATOM 25 O5' A A2090 187.959 10.659 237.395 1.00 36.26 O
TER

ATOM 1 O3' C B2115 198.026 8.351 243.846 1.00 38.43 O
ATOM 2 P G B2116 198.446 7.114 242.909 1.00 40.33 P
ATOM 3 OP1 G B2116 199.724 6.565 243.466 1.00 40.57 O
ATOM 4 OP2 G B2116 198.434 7.582 241.518 1.00 40.42 O
ATOM 5 O5' G B2116 197.269 6.090 243.156 1.00 40.09 O
ATOM 6 C5' G B2116 196.802 5.847 244.465 1.00 39.92 C
ATOM 7 C4' G B2116 195.545 5.038 244.441 1.00 39.70 C
ATOM 8 O4' G B2116 194.447 5.888 244.004 1.00 39.49 O
ATOM 9 C3' G B2116 195.569 3.847 243.487 1.00 39.80 C
ATOM 10 O3' G B2116 194.938 2.712 244.115 1.00 39.68 O
ATOM 11 C2' G B2116 194.737 4.355 242.300 1.00 39.71 C
ATOM 12 O2' G B2116 194.084 3.377 241.537 1.00 39.68 O
ATOM 13 C1' G B2116 193.742 5.232 242.988 1.00 39.44 C
ATOM 14 N9 G B2116 193.133 6.181 242.074 1.00 39.37 N
ATOM 15 C8 G B2116 191.784 6.181 241.806 1.00 39.15 C
ATOM 16 N7 G B2116 191.457 6.974 240.859 1.00 39.15 N
ATOM 17 C5 G B2116 192.651 7.498 240.454 1.00 39.39 C
ATOM 18 C6 G B2116 192.855 8.401 239.437 1.00 39.50 C
ATOM 19 O6 G B2116 192.044 8.935 238.739 1.00 39.40 O
ATOM 20 N1 G B2116 194.162 8.728 239.280 1.00 39.75 N
ATOM 21 C2 G B2116 195.199 8.221 240.017 1.00 39.89 C
ATOM 22 N2 G B2116 196.364 8.749 239.629 1.00 40.14 N
ATOM 23 N3 G B2116 195.054 7.316 241.003 1.00 39.79 N
ATOM 24 C4 G B2116 193.728 7.005 241.154 1.00 39.54 C
ATOM 25 P C B2117 195.714 1.312 244.253 1.00 64.19 P
ATOM 26 OP1 C B2117 196.485 1.392 245.488 1.00 64.27 O
ATOM 27 OP2 C B2117 196.424 1.055 242.987 1.00 64.43 O
ATOM 28 O5' C B2117 194.539 0.280 244.418 1.00 64.01 O
TER

Atoms:
C2: (191.726,5.878,237.331)
OP1: (194.543,12.018,233.259)
OP2: (195.232,9.892,234.400)
C4: (193.813,5.417,237.947)
O5': (192.818,10.538,234.200)
C3': (190.692,9.654,235.708)
C1': (190.885,7.289,235.594)
O4': (191.352,7.844,234.403)
C5': (191.758,10.022,233.448)
P: (194.264,10.640,233.574)
O2: (190.570,5.744,237.387)
C4': (190.860,9.195,234.292)
C2': (190.125,8.415,236.358)
O2': (188.733,8.321,236.070)
N1: (192.069,6.738,236.347)
N3: (192.534,5.226,238.141)
N4: (194.530,4.721,238.849)
C6: (193.442,6.927,236.134)
C5: (194.359,6.291,236.908)
O3': (189.829,10.734,235.715)
OP1: (199.724,6.565,243.466)
OP2: (198.434,7.582,241.518)
C3': (195.569,3.847,243.487)
C1': (193.742,5.232,242.988)
C5': (196.802,5.847,244.465)
O6: (192.044,8.935,238.739)
O4': (194.447,5.888,244.004)
C8: (191.784,6.181,241.806)
C2: (195.199,8.221,240.017)
C6: (192.855,8.401,239.437)
C5: (192.651,7.498,240.454)
C4: (193.728,7.005,241.154)
P: (198.446,7.114,242.909)
C4': (195.545,5.038,244.441)
C2': (194.737,4.355,242.300)
O2': (194.084,3.377,241.537)
N1: (194.162,8.728,239.280)
N2: (196.364,8.749,239.629)
N3: (195.054,7.316,241.003)
N7: (191.457,6.974,240.859)
N9: (193.133,6.181,242.074)
O5': (197.269,6.090,243.156)
O3': (194.938,2.712,244.115)
Image (generated by PyMOL):
PyMOL image
show in jmol