Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C23:C10
Extra
PDB:
ATOM 1 O3' U A 22 26.149 -12.451 29.681 1.00 29.63 O
ATOM 2 P C A 23 27.206 -11.790 30.694 1.00 30.45 P
ATOM 3 OP1 C A 23 27.844 -12.922 31.424 1.00 31.76 O
ATOM 4 OP2 C A 23 26.519 -10.707 31.459 1.00 28.78 O
ATOM 5 O5' C A 23 28.295 -11.132 29.731 1.00 29.98 O
ATOM 6 C5' C A 23 29.162 -11.947 28.948 1.00 26.39 C
ATOM 7 C4' C A 23 29.950 -11.103 27.978 1.00 27.01 C
ATOM 8 O4' C A 23 29.028 -10.404 27.101 1.00 27.86 O
ATOM 9 C3' C A 23 30.790 -9.968 28.547 1.00 27.84 C
ATOM 10 O3' C A 23 32.025 -10.427 29.099 1.00 30.36 O
ATOM 11 C2' C A 23 31.002 -9.129 27.296 1.00 26.56 C
ATOM 12 O2' C A 23 31.892 -9.736 26.387 1.00 28.26 O
ATOM 13 C1' C A 23 29.608 -9.179 26.685 1.00 25.20 C
ATOM 14 N1 C A 23 28.772 -8.059 27.156 1.00 24.18 N
ATOM 15 C2 C A 23 28.900 -6.833 26.505 1.00 22.72 C
ATOM 16 O2 C A 23 29.707 -6.739 25.577 1.00 22.79 O
ATOM 17 N3 C A 23 28.149 -5.788 26.897 1.00 22.12 N
ATOM 18 C4 C A 23 27.287 -5.927 27.899 1.00 22.84 C
ATOM 19 N4 C A 23 26.551 -4.856 28.234 1.00 20.11 N
ATOM 20 C5 C A 23 27.136 -7.168 28.597 1.00 22.48 C
ATOM 21 C6 C A 23 27.894 -8.199 28.195 1.00 22.12 C
ATOM 22 P A A 24 32.848 -9.494 30.133 1.00 30.19 P
ATOM 23 OP1 A A 24 34.045 -10.272 30.546 1.00 31.86 O
ATOM 24 OP2 A A 24 31.927 -8.953 31.166 1.00 27.11 O
ATOM 25 O5' A A 24 33.358 -8.270 29.251 1.00 29.94 O
TER
ATOM 1 O3' C B 9 35.007 -9.881 16.881 1.00 75.28 O
ATOM 2 P C B 10 33.935 -11.039 17.200 1.00 75.79 P
ATOM 3 OP1 C B 10 34.281 -12.214 16.358 1.00 76.76 O
ATOM 4 OP2 C B 10 32.577 -10.440 17.104 1.00 75.97 O
ATOM 5 O5' C B 10 34.219 -11.440 18.719 1.00 75.56 O
ATOM 6 C5' C B 10 35.255 -12.364 19.050 1.00 74.81 C
ATOM 7 C4' C B 10 35.087 -12.871 20.469 1.00 73.96 C
ATOM 8 O4' C B 10 35.351 -11.808 21.423 1.00 75.06 O
ATOM 9 C3' C B 10 33.701 -13.367 20.843 1.00 72.73 C
ATOM 10 O3' C B 10 33.500 -14.696 20.389 1.00 69.28 O
ATOM 11 C2' C B 10 33.732 -13.272 22.365 1.00 73.84 C
ATOM 12 O2' C B 10 34.409 -14.349 22.981 1.00 73.70 O
ATOM 13 C1' C B 10 34.530 -11.982 22.569 1.00 75.64 C
ATOM 14 N1 C B 10 33.662 -10.803 22.694 1.00 78.19 N
ATOM 15 C2 C B 10 33.110 -10.497 23.944 1.00 79.54 C
ATOM 16 O2 C B 10 33.372 -11.231 24.915 1.00 79.52 O
ATOM 17 N3 C B 10 32.304 -9.414 24.060 1.00 80.69 N
ATOM 18 C4 C B 10 32.040 -8.658 22.989 1.00 80.84 C
ATOM 19 N4 C B 10 31.234 -7.607 23.145 1.00 81.40 N
ATOM 20 C5 C B 10 32.590 -8.949 21.707 1.00 80.24 C
ATOM 21 C6 C B 10 33.390 -10.018 21.607 1.00 79.26 C
ATOM 22 P C B 11 32.111 -15.091 19.690 1.00 67.14 P
ATOM 23 OP1 C B 11 32.404 -16.103 18.637 1.00 67.56 O
ATOM 24 OP2 C B 11 31.405 -13.835 19.330 1.00 68.00 O
ATOM 25 O5' C B 11 31.287 -15.804 20.850 1.00 63.04 O
TER
ATOM 2 P C A 23 27.206 -11.790 30.694 1.00 30.45 P
ATOM 3 OP1 C A 23 27.844 -12.922 31.424 1.00 31.76 O
ATOM 4 OP2 C A 23 26.519 -10.707 31.459 1.00 28.78 O
ATOM 5 O5' C A 23 28.295 -11.132 29.731 1.00 29.98 O
ATOM 6 C5' C A 23 29.162 -11.947 28.948 1.00 26.39 C
ATOM 7 C4' C A 23 29.950 -11.103 27.978 1.00 27.01 C
ATOM 8 O4' C A 23 29.028 -10.404 27.101 1.00 27.86 O
ATOM 9 C3' C A 23 30.790 -9.968 28.547 1.00 27.84 C
ATOM 10 O3' C A 23 32.025 -10.427 29.099 1.00 30.36 O
ATOM 11 C2' C A 23 31.002 -9.129 27.296 1.00 26.56 C
ATOM 12 O2' C A 23 31.892 -9.736 26.387 1.00 28.26 O
ATOM 13 C1' C A 23 29.608 -9.179 26.685 1.00 25.20 C
ATOM 14 N1 C A 23 28.772 -8.059 27.156 1.00 24.18 N
ATOM 15 C2 C A 23 28.900 -6.833 26.505 1.00 22.72 C
ATOM 16 O2 C A 23 29.707 -6.739 25.577 1.00 22.79 O
ATOM 17 N3 C A 23 28.149 -5.788 26.897 1.00 22.12 N
ATOM 18 C4 C A 23 27.287 -5.927 27.899 1.00 22.84 C
ATOM 19 N4 C A 23 26.551 -4.856 28.234 1.00 20.11 N
ATOM 20 C5 C A 23 27.136 -7.168 28.597 1.00 22.48 C
ATOM 21 C6 C A 23 27.894 -8.199 28.195 1.00 22.12 C
ATOM 22 P A A 24 32.848 -9.494 30.133 1.00 30.19 P
ATOM 23 OP1 A A 24 34.045 -10.272 30.546 1.00 31.86 O
ATOM 24 OP2 A A 24 31.927 -8.953 31.166 1.00 27.11 O
ATOM 25 O5' A A 24 33.358 -8.270 29.251 1.00 29.94 O
TER
ATOM 1 O3' C B 9 35.007 -9.881 16.881 1.00 75.28 O
ATOM 2 P C B 10 33.935 -11.039 17.200 1.00 75.79 P
ATOM 3 OP1 C B 10 34.281 -12.214 16.358 1.00 76.76 O
ATOM 4 OP2 C B 10 32.577 -10.440 17.104 1.00 75.97 O
ATOM 5 O5' C B 10 34.219 -11.440 18.719 1.00 75.56 O
ATOM 6 C5' C B 10 35.255 -12.364 19.050 1.00 74.81 C
ATOM 7 C4' C B 10 35.087 -12.871 20.469 1.00 73.96 C
ATOM 8 O4' C B 10 35.351 -11.808 21.423 1.00 75.06 O
ATOM 9 C3' C B 10 33.701 -13.367 20.843 1.00 72.73 C
ATOM 10 O3' C B 10 33.500 -14.696 20.389 1.00 69.28 O
ATOM 11 C2' C B 10 33.732 -13.272 22.365 1.00 73.84 C
ATOM 12 O2' C B 10 34.409 -14.349 22.981 1.00 73.70 O
ATOM 13 C1' C B 10 34.530 -11.982 22.569 1.00 75.64 C
ATOM 14 N1 C B 10 33.662 -10.803 22.694 1.00 78.19 N
ATOM 15 C2 C B 10 33.110 -10.497 23.944 1.00 79.54 C
ATOM 16 O2 C B 10 33.372 -11.231 24.915 1.00 79.52 O
ATOM 17 N3 C B 10 32.304 -9.414 24.060 1.00 80.69 N
ATOM 18 C4 C B 10 32.040 -8.658 22.989 1.00 80.84 C
ATOM 19 N4 C B 10 31.234 -7.607 23.145 1.00 81.40 N
ATOM 20 C5 C B 10 32.590 -8.949 21.707 1.00 80.24 C
ATOM 21 C6 C B 10 33.390 -10.018 21.607 1.00 79.26 C
ATOM 22 P C B 11 32.111 -15.091 19.690 1.00 67.14 P
ATOM 23 OP1 C B 11 32.404 -16.103 18.637 1.00 67.56 O
ATOM 24 OP2 C B 11 31.405 -13.835 19.330 1.00 68.00 O
ATOM 25 O5' C B 11 31.287 -15.804 20.850 1.00 63.04 O
TER
Atoms:
C2: (28.900,-6.833,26.505)
OP1: (27.844,-12.922,31.424)
OP2: (26.519,-10.707,31.459)
C4: (27.287,-5.927,27.899)
O5': (28.295,-11.132,29.731)
C3': (30.790,-9.968,28.547)
C1': (29.608,-9.179,26.685)
O4': (29.028,-10.404,27.101)
C5': (29.162,-11.947,28.948)
P: (27.206,-11.790,30.694)
O2: (29.707,-6.739,25.577)
C4': (29.950,-11.103,27.978)
C2': (31.002,-9.129,27.296)
O2': (31.892,-9.736,26.387)
N1: (28.772,-8.059,27.156)
N3: (28.149,-5.788,26.897)
N4: (26.551,-4.856,28.234)
C6: (27.894,-8.199,28.195)
C5: (27.136,-7.168,28.597)
O3': (32.025,-10.427,29.099)
OP1: (27.844,-12.922,31.424)
OP2: (26.519,-10.707,31.459)
C4: (27.287,-5.927,27.899)
O5': (28.295,-11.132,29.731)
C3': (30.790,-9.968,28.547)
C1': (29.608,-9.179,26.685)
O4': (29.028,-10.404,27.101)
C5': (29.162,-11.947,28.948)
P: (27.206,-11.790,30.694)
O2: (29.707,-6.739,25.577)
C4': (29.950,-11.103,27.978)
C2': (31.002,-9.129,27.296)
O2': (31.892,-9.736,26.387)
N1: (28.772,-8.059,27.156)
N3: (28.149,-5.788,26.897)
N4: (26.551,-4.856,28.234)
C6: (27.894,-8.199,28.195)
C5: (27.136,-7.168,28.597)
O3': (32.025,-10.427,29.099)
C2: (33.110,-10.497,23.944)
OP1: (34.281,-12.214,16.358)
OP2: (32.577,-10.440,17.104)
C4: (32.040,-8.658,22.989)
O5': (34.219,-11.440,18.719)
C3': (33.701,-13.367,20.843)
C1': (34.530,-11.982,22.569)
O4': (35.351,-11.808,21.423)
C5': (35.255,-12.364,19.050)
P: (33.935,-11.039,17.200)
O2: (33.372,-11.231,24.915)
C4': (35.087,-12.871,20.469)
C2': (33.732,-13.272,22.365)
O2': (34.409,-14.349,22.981)
N1: (33.662,-10.803,22.694)
N3: (32.304,-9.414,24.060)
N4: (31.234,-7.607,23.145)
C6: (33.390,-10.018,21.607)
C5: (32.590,-8.949,21.707)
O3': (33.500,-14.696,20.389)
OP1: (34.281,-12.214,16.358)
OP2: (32.577,-10.440,17.104)
C4: (32.040,-8.658,22.989)
O5': (34.219,-11.440,18.719)
C3': (33.701,-13.367,20.843)
C1': (34.530,-11.982,22.569)
O4': (35.351,-11.808,21.423)
C5': (35.255,-12.364,19.050)
P: (33.935,-11.039,17.200)
O2: (33.372,-11.231,24.915)
C4': (35.087,-12.871,20.469)
C2': (33.732,-13.272,22.365)
O2': (34.409,-14.349,22.981)
N1: (33.662,-10.803,22.694)
N3: (32.304,-9.414,24.060)
N4: (31.234,-7.607,23.145)
C6: (33.390,-10.018,21.607)
C5: (32.590,-8.949,21.707)
O3': (33.500,-14.696,20.389)
Image (generated by PyMOL):