ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWI:A5:B39

Extra

PDB:
ATOM 1 O3' C A 4 11.120 -24.868 1.595 1.00 80.17 O
ATOM 2 P U A 5 11.395 -25.876 2.811 1.00 78.46 P
ATOM 3 OP1 U A 5 12.712 -25.542 3.401 1.00 77.44 O
ATOM 4 OP2 U A 5 11.126 -27.261 2.355 1.00 78.34 O
ATOM 5 O5' U A 5 10.237 -25.484 3.839 1.00 77.25 O
ATOM 6 C5' U A 5 10.243 -24.207 4.464 1.00 76.06 C
ATOM 7 C4' U A 5 8.928 -23.959 5.172 1.00 74.82 C
ATOM 8 O4' U A 5 7.819 -24.048 4.243 1.00 75.12 O
ATOM 9 C3' U A 5 8.568 -24.981 6.234 1.00 73.29 C
ATOM 10 O3' U A 5 9.312 -24.762 7.416 1.00 71.87 O
ATOM 11 C2' U A 5 7.084 -24.687 6.393 1.00 73.66 C
ATOM 12 O2' U A 5 6.827 -23.493 7.101 1.00 74.07 O
ATOM 13 C1' U A 5 6.674 -24.521 4.931 1.00 74.41 C
ATOM 14 N1 U A 5 6.162 -25.803 4.332 1.00 74.15 N
ATOM 15 C2 U A 5 4.859 -26.182 4.601 1.00 74.20 C
ATOM 16 O2 U A 5 4.099 -25.529 5.293 1.00 73.91 O
ATOM 17 N3 U A 5 4.466 -27.368 4.024 1.00 74.68 N
ATOM 18 C4 U A 5 5.228 -28.205 3.225 1.00 74.95 C
ATOM 19 O4 U A 5 4.730 -29.237 2.782 1.00 75.50 O
ATOM 20 C5 U A 5 6.578 -27.750 2.988 1.00 74.53 C
ATOM 21 C6 U A 5 6.981 -26.594 3.538 1.00 74.34 C
ATOM 22 P G A 6 9.811 -26.013 8.279 1.00 70.68 P
ATOM 23 OP1 G A 6 10.984 -25.582 9.077 1.00 69.80 O
ATOM 24 OP2 G A 6 9.913 -27.215 7.415 1.00 70.26 O
ATOM 25 O5' G A 6 8.558 -26.214 9.253 1.00 69.90 O
TER

ATOM 1 O3' C B 38 6.707 -17.850 14.176 1.00 68.87 O
ATOM 2 P A B 39 7.438 -17.151 12.932 1.00 69.00 P
ATOM 3 OP1 A B 39 8.819 -16.820 13.362 1.00 68.65 O
ATOM 4 OP2 A B 39 6.557 -16.098 12.370 1.00 68.80 O
ATOM 5 O5' A B 39 7.491 -18.348 11.876 1.00 67.97 O
ATOM 6 C5' A B 39 8.443 -19.386 12.036 1.00 67.13 C
ATOM 7 C4' A B 39 8.306 -20.395 10.915 1.00 66.87 C
ATOM 8 O4' A B 39 7.066 -21.118 11.083 1.00 66.38 O
ATOM 9 C3' A B 39 8.188 -19.820 9.512 1.00 67.57 C
ATOM 10 O3' A B 39 9.469 -19.472 8.998 1.00 69.13 O
ATOM 11 C2' A B 39 7.572 -21.005 8.780 1.00 66.60 C
ATOM 12 O2' A B 39 8.505 -22.024 8.466 1.00 66.21 O
ATOM 13 C1' A B 39 6.586 -21.527 9.817 1.00 65.42 C
ATOM 14 N9 A B 39 5.223 -21.037 9.628 1.00 64.20 N
ATOM 15 C8 A B 39 4.631 -19.958 10.226 1.00 64.08 C
ATOM 16 N7 A B 39 3.386 -19.760 9.859 1.00 63.70 N
ATOM 17 C5 A B 39 3.142 -20.781 8.958 1.00 63.12 C
ATOM 18 C6 A B 39 2.003 -21.139 8.205 1.00 63.16 C
ATOM 19 N6 A B 39 0.848 -20.467 8.248 1.00 63.39 N
ATOM 20 N1 A B 39 2.097 -22.219 7.398 1.00 63.10 N
ATOM 21 C2 A B 39 3.253 -22.898 7.351 1.00 62.47 C
ATOM 22 N3 A B 39 4.386 -22.656 8.009 1.00 62.04 N
ATOM 23 C4 A B 39 4.264 -21.578 8.803 1.00 63.10 C
ATOM 24 P A B 40 9.688 -18.172 8.079 1.00 70.71 P
ATOM 25 OP1 A B 40 11.148 -17.932 8.052 1.00 70.96 O
ATOM 26 OP2 A B 40 8.780 -17.080 8.498 1.00 70.57 O
ATOM 27 O5' A B 40 9.191 -18.665 6.643 1.00 71.12 O
TER

Atoms:
C4: (5.228,-28.205,3.225)
N3: (4.466,-27.368,4.024)
OP1: (12.712,-25.542,3.401)
OP2: (11.126,-27.261,2.355)
C2: (4.859,-26.182,4.601)
C1': (6.674,-24.521,4.931)
C3': (8.568,-24.981,6.234)
O5': (10.237,-25.484,3.839)
O4': (7.819,-24.048,4.243)
C5': (10.243,-24.207,4.464)
P: (11.395,-25.876,2.811)
C4': (8.928,-23.959,5.172)
C2': (7.084,-24.687,6.393)
O2': (6.827,-23.493,7.101)
N1: (6.162,-25.803,4.332)
O4: (4.730,-29.237,2.782)
O2: (4.099,-25.529,5.293)
C6: (6.981,-26.594,3.538)
C5: (6.578,-27.750,2.988)
O3': (9.312,-24.762,7.416)
OP1: (8.819,-16.820,13.362)
OP2: (6.557,-16.098,12.370)
C3': (8.188,-19.820,9.512)
C1': (6.586,-21.527,9.817)
C5': (8.443,-19.386,12.036)
O4': (7.066,-21.118,11.083)
C8: (4.631,-19.958,10.226)
O2': (8.505,-22.024,8.466)
C6: (2.003,-21.139,8.205)
C5: (3.142,-20.781,8.958)
C4: (4.264,-21.578,8.803)
P: (7.438,-17.151,12.932)
C4': (8.306,-20.395,10.915)
C2': (7.572,-21.005,8.780)
C2: (3.253,-22.898,7.351)
N1: (2.097,-22.219,7.398)
N3: (4.386,-22.656,8.009)
N6: (0.848,-20.467,8.248)
N7: (3.386,-19.760,9.859)
N9: (5.223,-21.037,9.628)
O5': (7.491,-18.348,11.876)
O3': (9.469,-19.472,8.998)
Image (generated by PyMOL):
PyMOL image
show in jmol