Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01398:01387
Extra
PDB:
ATOM 1 O3' G A1397 60.096 167.542 67.742 1.00 39.03 O
ATOM 2 P C A1398 58.970 167.399 66.617 1.00 37.97 P
ATOM 3 OP1 C A1398 59.369 166.249 65.770 1.00 38.76 O
ATOM 4 OP2 C A1398 58.761 168.719 65.995 1.00 40.54 O
ATOM 5 O5' C A1398 57.663 167.001 67.429 1.00 38.81 O
ATOM 6 C5' C A1398 57.457 165.650 67.892 1.00 38.97 C
ATOM 7 C4' C A1398 56.022 165.465 68.309 1.00 37.74 C
ATOM 8 O4' C A1398 55.719 166.398 69.376 1.00 37.14 O
ATOM 9 C3' C A1398 55.019 165.792 67.220 1.00 39.74 C
ATOM 10 O3' C A1398 54.791 164.670 66.387 1.00 43.73 O
ATOM 11 C2' C A1398 53.792 166.206 68.012 1.00 39.30 C
ATOM 12 O2' C A1398 53.076 165.095 68.514 1.00 37.57 O
ATOM 13 C1' C A1398 54.442 166.974 69.166 1.00 38.01 C
ATOM 14 N1 C A1398 54.639 168.412 68.894 1.00 37.81 N
ATOM 15 C2 C A1398 53.534 169.267 68.904 1.00 36.63 C
ATOM 16 O2 C A1398 52.410 168.792 69.106 1.00 37.69 O
ATOM 17 N3 C A1398 53.721 170.590 68.689 1.00 35.99 N
ATOM 18 C4 C A1398 54.949 171.066 68.465 1.00 37.34 C
ATOM 19 N4 C A1398 55.092 172.379 68.288 1.00 37.30 N
ATOM 20 C5 C A1398 56.089 170.216 68.423 1.00 39.13 C
ATOM 21 C6 C A1398 55.892 168.910 68.643 1.00 39.73 C
ATOM 22 P U A1399 54.714 164.866 64.799 1.00 46.03 P
ATOM 23 OP1 U A1399 54.629 163.496 64.231 1.00 43.16 O
ATOM 24 OP2 U A1399 55.817 165.773 64.375 1.00 44.83 O
ATOM 25 O5' U A1399 53.323 165.609 64.581 1.00 45.72 O
TER
ATOM 1 O3' A B1386 43.362 163.351 72.125 1.00 57.40 O
ATOM 2 P C B1387 44.656 163.302 73.072 1.00 57.42 P
ATOM 3 OP1 C B1387 44.402 162.310 74.146 1.00 57.35 O
ATOM 4 OP2 C B1387 45.024 164.692 73.438 1.00 57.79 O
ATOM 5 O5' C B1387 45.791 162.726 72.116 1.00 53.40 O
ATOM 6 C5' C B1387 45.677 161.411 71.561 1.00 49.53 C
ATOM 7 C4' C B1387 46.930 161.048 70.807 1.00 48.25 C
ATOM 8 O4' C B1387 47.136 161.998 69.730 1.00 47.50 O
ATOM 9 C3' C B1387 48.232 161.100 71.587 1.00 46.46 C
ATOM 10 O3' C B1387 48.434 159.926 72.360 1.00 44.85 O
ATOM 11 C2' C B1387 49.260 161.225 70.472 1.00 47.24 C
ATOM 12 O2' C B1387 49.546 159.992 69.841 1.00 47.56 O
ATOM 13 C1' C B1387 48.526 162.143 69.491 1.00 45.84 C
ATOM 14 N1 C B1387 48.890 163.561 69.652 1.00 44.16 N
ATOM 15 C2 C B1387 50.137 163.990 69.182 1.00 44.65 C
ATOM 16 O2 C B1387 50.901 163.158 68.656 1.00 45.07 O
ATOM 17 N3 C B1387 50.481 165.293 69.315 1.00 43.96 N
ATOM 18 C4 C B1387 49.637 166.150 69.894 1.00 44.38 C
ATOM 19 N4 C B1387 50.012 167.429 69.991 1.00 44.10 N
ATOM 20 C5 C B1387 48.368 165.738 70.392 1.00 43.92 C
ATOM 21 C6 C B1387 48.037 164.447 70.248 1.00 43.97 C
ATOM 22 P U B1388 49.009 160.046 73.856 1.00 45.64 P
ATOM 23 OP1 U B1388 48.968 158.688 74.460 1.00 45.76 O
ATOM 24 OP2 U B1388 48.326 161.173 74.542 1.00 44.33 O
ATOM 25 O5' U B1388 50.528 160.456 73.648 1.00 41.80 O
TER
ATOM 2 P C A1398 58.970 167.399 66.617 1.00 37.97 P
ATOM 3 OP1 C A1398 59.369 166.249 65.770 1.00 38.76 O
ATOM 4 OP2 C A1398 58.761 168.719 65.995 1.00 40.54 O
ATOM 5 O5' C A1398 57.663 167.001 67.429 1.00 38.81 O
ATOM 6 C5' C A1398 57.457 165.650 67.892 1.00 38.97 C
ATOM 7 C4' C A1398 56.022 165.465 68.309 1.00 37.74 C
ATOM 8 O4' C A1398 55.719 166.398 69.376 1.00 37.14 O
ATOM 9 C3' C A1398 55.019 165.792 67.220 1.00 39.74 C
ATOM 10 O3' C A1398 54.791 164.670 66.387 1.00 43.73 O
ATOM 11 C2' C A1398 53.792 166.206 68.012 1.00 39.30 C
ATOM 12 O2' C A1398 53.076 165.095 68.514 1.00 37.57 O
ATOM 13 C1' C A1398 54.442 166.974 69.166 1.00 38.01 C
ATOM 14 N1 C A1398 54.639 168.412 68.894 1.00 37.81 N
ATOM 15 C2 C A1398 53.534 169.267 68.904 1.00 36.63 C
ATOM 16 O2 C A1398 52.410 168.792 69.106 1.00 37.69 O
ATOM 17 N3 C A1398 53.721 170.590 68.689 1.00 35.99 N
ATOM 18 C4 C A1398 54.949 171.066 68.465 1.00 37.34 C
ATOM 19 N4 C A1398 55.092 172.379 68.288 1.00 37.30 N
ATOM 20 C5 C A1398 56.089 170.216 68.423 1.00 39.13 C
ATOM 21 C6 C A1398 55.892 168.910 68.643 1.00 39.73 C
ATOM 22 P U A1399 54.714 164.866 64.799 1.00 46.03 P
ATOM 23 OP1 U A1399 54.629 163.496 64.231 1.00 43.16 O
ATOM 24 OP2 U A1399 55.817 165.773 64.375 1.00 44.83 O
ATOM 25 O5' U A1399 53.323 165.609 64.581 1.00 45.72 O
TER
ATOM 1 O3' A B1386 43.362 163.351 72.125 1.00 57.40 O
ATOM 2 P C B1387 44.656 163.302 73.072 1.00 57.42 P
ATOM 3 OP1 C B1387 44.402 162.310 74.146 1.00 57.35 O
ATOM 4 OP2 C B1387 45.024 164.692 73.438 1.00 57.79 O
ATOM 5 O5' C B1387 45.791 162.726 72.116 1.00 53.40 O
ATOM 6 C5' C B1387 45.677 161.411 71.561 1.00 49.53 C
ATOM 7 C4' C B1387 46.930 161.048 70.807 1.00 48.25 C
ATOM 8 O4' C B1387 47.136 161.998 69.730 1.00 47.50 O
ATOM 9 C3' C B1387 48.232 161.100 71.587 1.00 46.46 C
ATOM 10 O3' C B1387 48.434 159.926 72.360 1.00 44.85 O
ATOM 11 C2' C B1387 49.260 161.225 70.472 1.00 47.24 C
ATOM 12 O2' C B1387 49.546 159.992 69.841 1.00 47.56 O
ATOM 13 C1' C B1387 48.526 162.143 69.491 1.00 45.84 C
ATOM 14 N1 C B1387 48.890 163.561 69.652 1.00 44.16 N
ATOM 15 C2 C B1387 50.137 163.990 69.182 1.00 44.65 C
ATOM 16 O2 C B1387 50.901 163.158 68.656 1.00 45.07 O
ATOM 17 N3 C B1387 50.481 165.293 69.315 1.00 43.96 N
ATOM 18 C4 C B1387 49.637 166.150 69.894 1.00 44.38 C
ATOM 19 N4 C B1387 50.012 167.429 69.991 1.00 44.10 N
ATOM 20 C5 C B1387 48.368 165.738 70.392 1.00 43.92 C
ATOM 21 C6 C B1387 48.037 164.447 70.248 1.00 43.97 C
ATOM 22 P U B1388 49.009 160.046 73.856 1.00 45.64 P
ATOM 23 OP1 U B1388 48.968 158.688 74.460 1.00 45.76 O
ATOM 24 OP2 U B1388 48.326 161.173 74.542 1.00 44.33 O
ATOM 25 O5' U B1388 50.528 160.456 73.648 1.00 41.80 O
TER
Atoms:
C2: (53.534,169.267,68.904)
OP1: (59.369,166.249,65.770)
OP2: (58.761,168.719,65.995)
C4: (54.949,171.066,68.465)
O5': (57.663,167.001,67.429)
C3': (55.019,165.792,67.220)
C1': (54.442,166.974,69.166)
O4': (55.719,166.398,69.376)
C5': (57.457,165.650,67.892)
P: (58.970,167.399,66.617)
O2: (52.410,168.792,69.106)
C4': (56.022,165.465,68.309)
C2': (53.792,166.206,68.012)
O2': (53.076,165.095,68.514)
N1: (54.639,168.412,68.894)
N3: (53.721,170.590,68.689)
N4: (55.092,172.379,68.288)
C6: (55.892,168.910,68.643)
C5: (56.089,170.216,68.423)
O3': (54.791,164.670,66.387)
OP1: (59.369,166.249,65.770)
OP2: (58.761,168.719,65.995)
C4: (54.949,171.066,68.465)
O5': (57.663,167.001,67.429)
C3': (55.019,165.792,67.220)
C1': (54.442,166.974,69.166)
O4': (55.719,166.398,69.376)
C5': (57.457,165.650,67.892)
P: (58.970,167.399,66.617)
O2: (52.410,168.792,69.106)
C4': (56.022,165.465,68.309)
C2': (53.792,166.206,68.012)
O2': (53.076,165.095,68.514)
N1: (54.639,168.412,68.894)
N3: (53.721,170.590,68.689)
N4: (55.092,172.379,68.288)
C6: (55.892,168.910,68.643)
C5: (56.089,170.216,68.423)
O3': (54.791,164.670,66.387)
C2: (50.137,163.990,69.182)
OP1: (44.402,162.310,74.146)
OP2: (45.024,164.692,73.438)
C4: (49.637,166.150,69.894)
O5': (45.791,162.726,72.116)
C3': (48.232,161.100,71.587)
C1': (48.526,162.143,69.491)
O4': (47.136,161.998,69.730)
C5': (45.677,161.411,71.561)
P: (44.656,163.302,73.072)
O2: (50.901,163.158,68.656)
C4': (46.930,161.048,70.807)
C2': (49.260,161.225,70.472)
O2': (49.546,159.992,69.841)
N1: (48.890,163.561,69.652)
N3: (50.481,165.293,69.315)
N4: (50.012,167.429,69.991)
C6: (48.037,164.447,70.248)
C5: (48.368,165.738,70.392)
O3': (48.434,159.926,72.360)
OP1: (44.402,162.310,74.146)
OP2: (45.024,164.692,73.438)
C4: (49.637,166.150,69.894)
O5': (45.791,162.726,72.116)
C3': (48.232,161.100,71.587)
C1': (48.526,162.143,69.491)
O4': (47.136,161.998,69.730)
C5': (45.677,161.411,71.561)
P: (44.656,163.302,73.072)
O2: (50.901,163.158,68.656)
C4': (46.930,161.048,70.807)
C2': (49.260,161.225,70.472)
O2': (49.546,159.992,69.841)
N1: (48.890,163.561,69.652)
N3: (50.481,165.293,69.315)
N4: (50.012,167.429,69.991)
C6: (48.037,164.447,70.248)
C5: (48.368,165.738,70.392)
O3': (48.434,159.926,72.360)
Image (generated by PyMOL):