Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0967:0949
Extra
PDB:
ATOM 1 O3' A A 966 67.941 67.660 105.840 1.00 41.67 O
ATOM 2 P C A 967 68.428 66.533 106.887 1.00 41.37 P
ATOM 3 OP1 C A 967 69.022 67.172 108.083 1.00 42.32 O
ATOM 4 OP2 C A 967 69.226 65.552 106.112 1.00 45.09 O
ATOM 5 O5' C A 967 67.091 65.766 107.287 1.00 41.95 O
ATOM 6 C5' C A 967 66.502 65.930 108.570 1.00 37.67 C
ATOM 7 C4' C A 967 66.539 64.630 109.333 1.00 38.26 C
ATOM 8 O4' C A 967 66.583 64.956 110.742 1.00 39.57 O
ATOM 9 C3' C A 967 65.380 63.646 109.152 1.00 37.85 C
ATOM 10 O3' C A 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 11 C2' C A 967 65.343 62.947 110.507 1.00 38.20 C
ATOM 12 O2' C A 967 66.354 61.966 110.607 1.00 36.92 O
ATOM 13 C1' C A 967 65.736 64.083 111.455 1.00 38.62 C
ATOM 14 N1 C A 967 64.651 64.889 112.040 1.00 38.48 N
ATOM 15 C2 C A 967 63.931 64.367 113.107 1.00 40.14 C
ATOM 16 O2 C A 967 64.163 63.201 113.472 1.00 42.92 O
ATOM 17 N3 C A 967 62.998 65.141 113.715 1.00 39.85 N
ATOM 18 C4 C A 967 62.773 66.385 113.278 1.00 38.99 C
ATOM 19 N4 C A 967 61.874 67.130 113.927 1.00 36.72 N
ATOM 20 C5 C A 967 63.465 66.924 112.160 1.00 38.54 C
ATOM 21 C6 C A 967 64.381 66.147 111.573 1.00 37.89 C
ATOM 22 P U A 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 23 OP1 U A 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 24 OP2 U A 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 25 O5' U A 968 63.728 61.067 108.606 1.00 40.59 O
TER
ATOM 1 O3' A B 948 66.376 53.290 116.254 1.00 52.97 O
ATOM 2 P C B 949 67.462 54.423 116.608 1.00 51.69 P
ATOM 3 OP1 C B 949 68.593 53.775 117.307 1.00 54.65 O
ATOM 4 OP2 C B 949 66.781 55.580 117.243 1.00 53.31 O
ATOM 5 O5' C B 949 68.008 54.879 115.188 1.00 51.36 O
ATOM 6 C5' C B 949 68.427 53.912 114.213 1.00 49.66 C
ATOM 7 C4' C B 949 68.637 54.580 112.880 1.00 48.14 C
ATOM 8 O4' C B 949 67.386 55.174 112.439 1.00 48.25 O
ATOM 9 C3' C B 949 69.597 55.752 112.905 1.00 47.92 C
ATOM 10 O3' C B 949 70.951 55.348 112.846 1.00 48.82 O
ATOM 11 C2' C B 949 69.171 56.541 111.679 1.00 48.27 C
ATOM 12 O2' C B 949 69.651 55.989 110.468 1.00 47.67 O
ATOM 13 C1' C B 949 67.652 56.385 111.749 1.00 47.74 C
ATOM 14 N1 C B 949 66.995 57.502 112.458 1.00 48.23 N
ATOM 15 C2 C B 949 66.787 58.706 111.765 1.00 49.08 C
ATOM 16 O2 C B 949 67.142 58.790 110.575 1.00 50.34 O
ATOM 17 N3 C B 949 66.201 59.743 112.404 1.00 48.29 N
ATOM 18 C4 C B 949 65.820 59.617 113.672 1.00 47.05 C
ATOM 19 N4 C B 949 65.240 60.667 114.249 1.00 46.32 N
ATOM 20 C5 C B 949 66.014 58.407 114.402 1.00 46.61 C
ATOM 21 C6 C B 949 66.599 57.385 113.762 1.00 46.57 C
ATOM 22 P C B 950 72.069 56.253 113.554 1.00 51.46 P
ATOM 23 OP1 C B 950 73.397 55.829 113.054 1.00 51.70 O
ATOM 24 OP2 C B 950 71.804 56.274 115.013 1.00 51.45 O
ATOM 25 O5' C B 950 71.784 57.707 112.987 1.00 52.48 O
TER
ATOM 2 P C A 967 68.428 66.533 106.887 1.00 41.37 P
ATOM 3 OP1 C A 967 69.022 67.172 108.083 1.00 42.32 O
ATOM 4 OP2 C A 967 69.226 65.552 106.112 1.00 45.09 O
ATOM 5 O5' C A 967 67.091 65.766 107.287 1.00 41.95 O
ATOM 6 C5' C A 967 66.502 65.930 108.570 1.00 37.67 C
ATOM 7 C4' C A 967 66.539 64.630 109.333 1.00 38.26 C
ATOM 8 O4' C A 967 66.583 64.956 110.742 1.00 39.57 O
ATOM 9 C3' C A 967 65.380 63.646 109.152 1.00 37.85 C
ATOM 10 O3' C A 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 11 C2' C A 967 65.343 62.947 110.507 1.00 38.20 C
ATOM 12 O2' C A 967 66.354 61.966 110.607 1.00 36.92 O
ATOM 13 C1' C A 967 65.736 64.083 111.455 1.00 38.62 C
ATOM 14 N1 C A 967 64.651 64.889 112.040 1.00 38.48 N
ATOM 15 C2 C A 967 63.931 64.367 113.107 1.00 40.14 C
ATOM 16 O2 C A 967 64.163 63.201 113.472 1.00 42.92 O
ATOM 17 N3 C A 967 62.998 65.141 113.715 1.00 39.85 N
ATOM 18 C4 C A 967 62.773 66.385 113.278 1.00 38.99 C
ATOM 19 N4 C A 967 61.874 67.130 113.927 1.00 36.72 N
ATOM 20 C5 C A 967 63.465 66.924 112.160 1.00 38.54 C
ATOM 21 C6 C A 967 64.381 66.147 111.573 1.00 37.89 C
ATOM 22 P U A 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 23 OP1 U A 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 24 OP2 U A 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 25 O5' U A 968 63.728 61.067 108.606 1.00 40.59 O
TER
ATOM 1 O3' A B 948 66.376 53.290 116.254 1.00 52.97 O
ATOM 2 P C B 949 67.462 54.423 116.608 1.00 51.69 P
ATOM 3 OP1 C B 949 68.593 53.775 117.307 1.00 54.65 O
ATOM 4 OP2 C B 949 66.781 55.580 117.243 1.00 53.31 O
ATOM 5 O5' C B 949 68.008 54.879 115.188 1.00 51.36 O
ATOM 6 C5' C B 949 68.427 53.912 114.213 1.00 49.66 C
ATOM 7 C4' C B 949 68.637 54.580 112.880 1.00 48.14 C
ATOM 8 O4' C B 949 67.386 55.174 112.439 1.00 48.25 O
ATOM 9 C3' C B 949 69.597 55.752 112.905 1.00 47.92 C
ATOM 10 O3' C B 949 70.951 55.348 112.846 1.00 48.82 O
ATOM 11 C2' C B 949 69.171 56.541 111.679 1.00 48.27 C
ATOM 12 O2' C B 949 69.651 55.989 110.468 1.00 47.67 O
ATOM 13 C1' C B 949 67.652 56.385 111.749 1.00 47.74 C
ATOM 14 N1 C B 949 66.995 57.502 112.458 1.00 48.23 N
ATOM 15 C2 C B 949 66.787 58.706 111.765 1.00 49.08 C
ATOM 16 O2 C B 949 67.142 58.790 110.575 1.00 50.34 O
ATOM 17 N3 C B 949 66.201 59.743 112.404 1.00 48.29 N
ATOM 18 C4 C B 949 65.820 59.617 113.672 1.00 47.05 C
ATOM 19 N4 C B 949 65.240 60.667 114.249 1.00 46.32 N
ATOM 20 C5 C B 949 66.014 58.407 114.402 1.00 46.61 C
ATOM 21 C6 C B 949 66.599 57.385 113.762 1.00 46.57 C
ATOM 22 P C B 950 72.069 56.253 113.554 1.00 51.46 P
ATOM 23 OP1 C B 950 73.397 55.829 113.054 1.00 51.70 O
ATOM 24 OP2 C B 950 71.804 56.274 115.013 1.00 51.45 O
ATOM 25 O5' C B 950 71.784 57.707 112.987 1.00 52.48 O
TER
Atoms:
C2: (63.931,64.367,113.107)
OP1: (69.022,67.172,108.083)
OP2: (69.226,65.552,106.112)
C4: (62.773,66.385,113.278)
O5': (67.091,65.766,107.287)
C3': (65.380,63.646,109.152)
C1': (65.736,64.083,111.455)
O4': (66.583,64.956,110.742)
C5': (66.502,65.930,108.570)
P: (68.428,66.533,106.887)
O2: (64.163,63.201,113.472)
C4': (66.539,64.630,109.333)
C2': (65.343,62.947,110.507)
O2': (66.354,61.966,110.607)
N1: (64.651,64.889,112.040)
N3: (62.998,65.141,113.715)
N4: (61.874,67.130,113.927)
C6: (64.381,66.147,111.573)
C5: (63.465,66.924,112.160)
O3': (65.637,62.699,108.101)
OP1: (69.022,67.172,108.083)
OP2: (69.226,65.552,106.112)
C4: (62.773,66.385,113.278)
O5': (67.091,65.766,107.287)
C3': (65.380,63.646,109.152)
C1': (65.736,64.083,111.455)
O4': (66.583,64.956,110.742)
C5': (66.502,65.930,108.570)
P: (68.428,66.533,106.887)
O2: (64.163,63.201,113.472)
C4': (66.539,64.630,109.333)
C2': (65.343,62.947,110.507)
O2': (66.354,61.966,110.607)
N1: (64.651,64.889,112.040)
N3: (62.998,65.141,113.715)
N4: (61.874,67.130,113.927)
C6: (64.381,66.147,111.573)
C5: (63.465,66.924,112.160)
O3': (65.637,62.699,108.101)
C2: (66.787,58.706,111.765)
OP1: (68.593,53.775,117.307)
OP2: (66.781,55.580,117.243)
C4: (65.820,59.617,113.672)
O5': (68.008,54.879,115.188)
C3': (69.597,55.752,112.905)
C1': (67.652,56.385,111.749)
O4': (67.386,55.174,112.439)
C5': (68.427,53.912,114.213)
P: (67.462,54.423,116.608)
O2: (67.142,58.790,110.575)
C4': (68.637,54.580,112.880)
C2': (69.171,56.541,111.679)
O2': (69.651,55.989,110.468)
N1: (66.995,57.502,112.458)
N3: (66.201,59.743,112.404)
N4: (65.240,60.667,114.249)
C6: (66.599,57.385,113.762)
C5: (66.014,58.407,114.402)
O3': (70.951,55.348,112.846)
OP1: (68.593,53.775,117.307)
OP2: (66.781,55.580,117.243)
C4: (65.820,59.617,113.672)
O5': (68.008,54.879,115.188)
C3': (69.597,55.752,112.905)
C1': (67.652,56.385,111.749)
O4': (67.386,55.174,112.439)
C5': (68.427,53.912,114.213)
P: (67.462,54.423,116.608)
O2: (67.142,58.790,110.575)
C4': (68.637,54.580,112.880)
C2': (69.171,56.541,111.679)
O2': (69.651,55.989,110.468)
N1: (66.995,57.502,112.458)
N3: (66.201,59.743,112.404)
N4: (65.240,60.667,114.249)
C6: (66.599,57.385,113.762)
C5: (66.014,58.407,114.402)
O3': (70.951,55.348,112.846)
Image (generated by PyMOL):