Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:947:934
Extra
PDB:
ATOM 1 O3' A A 46 75.156 18.634 86.369 1.00 68.52 O
ATOM 2 P C A 47 74.053 17.494 86.661 1.00 71.18 P
ATOM 3 OP1 C A 47 73.016 17.585 85.597 1.00 69.47 O
ATOM 4 OP2 C A 47 73.656 17.602 88.088 1.00 69.33 O
ATOM 5 O5' C A 47 74.839 16.114 86.481 1.00 72.67 O
ATOM 6 C5' C A 47 75.366 15.717 85.187 1.00 73.98 C
ATOM 7 C4' C A 47 76.332 14.550 85.327 1.00 73.45 C
ATOM 8 O4' C A 47 77.429 14.917 86.203 1.00 73.37 O
ATOM 9 C3' C A 47 75.794 13.269 85.943 1.00 72.43 C
ATOM 10 O3' C A 47 75.105 12.479 84.991 1.00 72.87 O
ATOM 11 C2' C A 47 77.067 12.581 86.409 1.00 72.21 C
ATOM 12 O2' C A 47 77.777 11.968 85.353 1.00 73.16 O
ATOM 13 C1' C A 47 77.876 13.775 86.912 1.00 71.97 C
ATOM 14 N1 C A 47 77.689 14.010 88.353 1.00 71.69 N
ATOM 15 C2 C A 47 78.503 13.314 89.253 1.00 71.95 C
ATOM 16 O2 C A 47 79.356 12.531 88.810 1.00 73.41 O
ATOM 17 N3 C A 47 78.342 13.510 90.580 1.00 71.83 N
ATOM 18 C4 C A 47 77.413 14.358 91.019 1.00 72.14 C
ATOM 19 N4 C A 47 77.292 14.518 92.337 1.00 72.10 N
ATOM 20 C5 C A 47 76.568 15.082 90.124 1.00 71.83 C
ATOM 21 C6 C A 47 76.740 14.881 88.813 1.00 70.66 C
ATOM 22 P G A 48 74.009 11.426 85.488 1.00 73.44 P
ATOM 23 OP1 G A 48 73.553 10.698 84.275 1.00 72.15 O
ATOM 24 OP2 G A 48 73.017 12.152 86.318 1.00 75.36 O
ATOM 25 O5' G A 48 74.824 10.455 86.461 1.00 74.16 O
TER
ATOM 1 O3' A B 33 88.060 8.945 84.219 1.00 89.80 O
ATOM 2 P C B 34 87.841 10.432 83.631 1.00 88.62 P
ATOM 3 OP1 C B 34 89.166 10.933 83.166 1.00 87.95 O
ATOM 4 OP2 C B 34 87.055 11.238 84.610 1.00 87.71 O
ATOM 5 O5' C B 34 86.943 10.175 82.343 1.00 85.80 O
ATOM 6 C5' C B 34 86.077 11.193 81.848 1.00 83.37 C
ATOM 7 C4' C B 34 84.780 10.596 81.370 1.00 81.21 C
ATOM 8 O4' C B 34 84.191 9.767 82.406 1.00 79.52 O
ATOM 9 C3' C B 34 83.726 11.644 81.087 1.00 80.54 C
ATOM 10 O3' C B 34 83.934 12.224 79.812 1.00 80.85 O
ATOM 11 C2' C B 34 82.437 10.857 81.254 1.00 79.49 C
ATOM 12 O2' C B 34 82.161 10.004 80.160 1.00 79.44 O
ATOM 13 C1' C B 34 82.790 9.998 82.470 1.00 78.15 C
ATOM 14 N1 C B 34 82.495 10.652 83.765 1.00 75.80 N
ATOM 15 C2 C B 34 81.158 10.970 84.100 1.00 74.69 C
ATOM 16 O2 C B 34 80.246 10.704 83.298 1.00 72.28 O
ATOM 17 N3 C B 34 80.904 11.561 85.291 1.00 74.87 N
ATOM 18 C4 C B 34 81.908 11.840 86.131 1.00 74.81 C
ATOM 19 N4 C B 34 81.608 12.423 87.296 1.00 74.00 N
ATOM 20 C5 C B 34 83.265 11.534 85.815 1.00 74.54 C
ATOM 21 C6 C B 34 83.510 10.947 84.638 1.00 74.94 C
ATOM 22 P C B 35 84.541 13.709 79.713 1.00 81.87 P
ATOM 23 OP1 C B 35 85.147 13.825 78.358 1.00 81.64 O
ATOM 24 OP2 C B 35 85.370 14.001 80.918 1.00 79.96 O
ATOM 25 O5' C B 35 83.253 14.643 79.794 1.00 81.53 O
TER
ATOM 2 P C A 47 74.053 17.494 86.661 1.00 71.18 P
ATOM 3 OP1 C A 47 73.016 17.585 85.597 1.00 69.47 O
ATOM 4 OP2 C A 47 73.656 17.602 88.088 1.00 69.33 O
ATOM 5 O5' C A 47 74.839 16.114 86.481 1.00 72.67 O
ATOM 6 C5' C A 47 75.366 15.717 85.187 1.00 73.98 C
ATOM 7 C4' C A 47 76.332 14.550 85.327 1.00 73.45 C
ATOM 8 O4' C A 47 77.429 14.917 86.203 1.00 73.37 O
ATOM 9 C3' C A 47 75.794 13.269 85.943 1.00 72.43 C
ATOM 10 O3' C A 47 75.105 12.479 84.991 1.00 72.87 O
ATOM 11 C2' C A 47 77.067 12.581 86.409 1.00 72.21 C
ATOM 12 O2' C A 47 77.777 11.968 85.353 1.00 73.16 O
ATOM 13 C1' C A 47 77.876 13.775 86.912 1.00 71.97 C
ATOM 14 N1 C A 47 77.689 14.010 88.353 1.00 71.69 N
ATOM 15 C2 C A 47 78.503 13.314 89.253 1.00 71.95 C
ATOM 16 O2 C A 47 79.356 12.531 88.810 1.00 73.41 O
ATOM 17 N3 C A 47 78.342 13.510 90.580 1.00 71.83 N
ATOM 18 C4 C A 47 77.413 14.358 91.019 1.00 72.14 C
ATOM 19 N4 C A 47 77.292 14.518 92.337 1.00 72.10 N
ATOM 20 C5 C A 47 76.568 15.082 90.124 1.00 71.83 C
ATOM 21 C6 C A 47 76.740 14.881 88.813 1.00 70.66 C
ATOM 22 P G A 48 74.009 11.426 85.488 1.00 73.44 P
ATOM 23 OP1 G A 48 73.553 10.698 84.275 1.00 72.15 O
ATOM 24 OP2 G A 48 73.017 12.152 86.318 1.00 75.36 O
ATOM 25 O5' G A 48 74.824 10.455 86.461 1.00 74.16 O
TER
ATOM 1 O3' A B 33 88.060 8.945 84.219 1.00 89.80 O
ATOM 2 P C B 34 87.841 10.432 83.631 1.00 88.62 P
ATOM 3 OP1 C B 34 89.166 10.933 83.166 1.00 87.95 O
ATOM 4 OP2 C B 34 87.055 11.238 84.610 1.00 87.71 O
ATOM 5 O5' C B 34 86.943 10.175 82.343 1.00 85.80 O
ATOM 6 C5' C B 34 86.077 11.193 81.848 1.00 83.37 C
ATOM 7 C4' C B 34 84.780 10.596 81.370 1.00 81.21 C
ATOM 8 O4' C B 34 84.191 9.767 82.406 1.00 79.52 O
ATOM 9 C3' C B 34 83.726 11.644 81.087 1.00 80.54 C
ATOM 10 O3' C B 34 83.934 12.224 79.812 1.00 80.85 O
ATOM 11 C2' C B 34 82.437 10.857 81.254 1.00 79.49 C
ATOM 12 O2' C B 34 82.161 10.004 80.160 1.00 79.44 O
ATOM 13 C1' C B 34 82.790 9.998 82.470 1.00 78.15 C
ATOM 14 N1 C B 34 82.495 10.652 83.765 1.00 75.80 N
ATOM 15 C2 C B 34 81.158 10.970 84.100 1.00 74.69 C
ATOM 16 O2 C B 34 80.246 10.704 83.298 1.00 72.28 O
ATOM 17 N3 C B 34 80.904 11.561 85.291 1.00 74.87 N
ATOM 18 C4 C B 34 81.908 11.840 86.131 1.00 74.81 C
ATOM 19 N4 C B 34 81.608 12.423 87.296 1.00 74.00 N
ATOM 20 C5 C B 34 83.265 11.534 85.815 1.00 74.54 C
ATOM 21 C6 C B 34 83.510 10.947 84.638 1.00 74.94 C
ATOM 22 P C B 35 84.541 13.709 79.713 1.00 81.87 P
ATOM 23 OP1 C B 35 85.147 13.825 78.358 1.00 81.64 O
ATOM 24 OP2 C B 35 85.370 14.001 80.918 1.00 79.96 O
ATOM 25 O5' C B 35 83.253 14.643 79.794 1.00 81.53 O
TER
Atoms:
C2: (78.503,13.314,89.253)
OP1: (73.016,17.585,85.597)
OP2: (73.656,17.602,88.088)
C4: (77.413,14.358,91.019)
O5': (74.839,16.114,86.481)
C3': (75.794,13.269,85.943)
C1': (77.876,13.775,86.912)
O4': (77.429,14.917,86.203)
C5': (75.366,15.717,85.187)
P: (74.053,17.494,86.661)
O2: (79.356,12.531,88.810)
C4': (76.332,14.550,85.327)
C2': (77.067,12.581,86.409)
O2': (77.777,11.968,85.353)
N1: (77.689,14.010,88.353)
N3: (78.342,13.510,90.580)
N4: (77.292,14.518,92.337)
C6: (76.740,14.881,88.813)
C5: (76.568,15.082,90.124)
O3': (75.105,12.479,84.991)
OP1: (73.016,17.585,85.597)
OP2: (73.656,17.602,88.088)
C4: (77.413,14.358,91.019)
O5': (74.839,16.114,86.481)
C3': (75.794,13.269,85.943)
C1': (77.876,13.775,86.912)
O4': (77.429,14.917,86.203)
C5': (75.366,15.717,85.187)
P: (74.053,17.494,86.661)
O2: (79.356,12.531,88.810)
C4': (76.332,14.550,85.327)
C2': (77.067,12.581,86.409)
O2': (77.777,11.968,85.353)
N1: (77.689,14.010,88.353)
N3: (78.342,13.510,90.580)
N4: (77.292,14.518,92.337)
C6: (76.740,14.881,88.813)
C5: (76.568,15.082,90.124)
O3': (75.105,12.479,84.991)
C2: (81.158,10.970,84.100)
OP1: (89.166,10.933,83.166)
OP2: (87.055,11.238,84.610)
C4: (81.908,11.840,86.131)
O5': (86.943,10.175,82.343)
C3': (83.726,11.644,81.087)
C1': (82.790,9.998,82.470)
O4': (84.191,9.767,82.406)
C5': (86.077,11.193,81.848)
P: (87.841,10.432,83.631)
O2: (80.246,10.704,83.298)
C4': (84.780,10.596,81.370)
C2': (82.437,10.857,81.254)
O2': (82.161,10.004,80.160)
N1: (82.495,10.652,83.765)
N3: (80.904,11.561,85.291)
N4: (81.608,12.423,87.296)
C6: (83.510,10.947,84.638)
C5: (83.265,11.534,85.815)
O3': (83.934,12.224,79.812)
OP1: (89.166,10.933,83.166)
OP2: (87.055,11.238,84.610)
C4: (81.908,11.840,86.131)
O5': (86.943,10.175,82.343)
C3': (83.726,11.644,81.087)
C1': (82.790,9.998,82.470)
O4': (84.191,9.767,82.406)
C5': (86.077,11.193,81.848)
P: (87.841,10.432,83.631)
O2: (80.246,10.704,83.298)
C4': (84.780,10.596,81.370)
C2': (82.437,10.857,81.254)
O2': (82.161,10.004,80.160)
N1: (82.495,10.652,83.765)
N3: (80.904,11.561,85.291)
N4: (81.608,12.423,87.296)
C6: (83.510,10.947,84.638)
C5: (83.265,11.534,85.815)
O3': (83.934,12.224,79.812)
Image (generated by PyMOL):