Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01398:01387
Extra
PDB:
ATOM 1 O3' G A1397 60.249 167.555 67.598 1.00 43.79 O
ATOM 2 P C A1398 59.053 167.387 66.541 1.00 45.14 P
ATOM 3 OP1 C A1398 59.375 166.210 65.705 1.00 44.48 O
ATOM 4 OP2 C A1398 58.815 168.695 65.890 1.00 46.26 O
ATOM 5 O5' C A1398 57.788 167.044 67.441 1.00 44.16 O
ATOM 6 C5' C A1398 57.545 165.709 67.908 1.00 45.30 C
ATOM 7 C4' C A1398 56.089 165.547 68.258 1.00 46.56 C
ATOM 8 O4' C A1398 55.740 166.494 69.303 1.00 46.81 O
ATOM 9 C3' C A1398 55.139 165.875 67.124 1.00 47.70 C
ATOM 10 O3' C A1398 54.962 164.764 66.265 1.00 50.13 O
ATOM 11 C2' C A1398 53.875 166.278 67.865 1.00 47.36 C
ATOM 12 O2' C A1398 53.180 165.156 68.367 1.00 46.26 O
ATOM 13 C1' C A1398 54.466 167.062 69.038 1.00 46.62 C
ATOM 14 N1 C A1398 54.659 168.510 68.787 1.00 46.75 N
ATOM 15 C2 C A1398 53.561 169.378 68.872 1.00 45.34 C
ATOM 16 O2 C A1398 52.443 168.912 69.112 1.00 43.60 O
ATOM 17 N3 C A1398 53.755 170.707 68.689 1.00 45.73 N
ATOM 18 C4 C A1398 54.981 171.175 68.426 1.00 46.46 C
ATOM 19 N4 C A1398 55.137 172.492 68.280 1.00 45.16 N
ATOM 20 C5 C A1398 56.105 170.315 68.307 1.00 46.94 C
ATOM 21 C6 C A1398 55.902 169.004 68.491 1.00 47.59 C
ATOM 22 P U A1399 54.793 165.004 64.690 1.00 52.75 P
ATOM 23 OP1 U A1399 54.725 163.663 64.069 1.00 52.69 O
ATOM 24 OP2 U A1399 55.826 165.968 64.236 1.00 50.61 O
ATOM 25 O5' U A1399 53.364 165.694 64.578 1.00 52.51 O
TER
ATOM 1 O3' A B1386 43.540 163.328 72.027 1.00 59.02 O
ATOM 2 P C B1387 44.841 163.286 72.960 1.00 58.64 P
ATOM 3 OP1 C B1387 44.575 162.304 74.033 1.00 58.94 O
ATOM 4 OP2 C B1387 45.226 164.673 73.321 1.00 59.34 O
ATOM 5 O5' C B1387 45.967 162.702 72.000 1.00 54.82 O
ATOM 6 C5' C B1387 45.832 161.403 71.427 1.00 50.47 C
ATOM 7 C4' C B1387 47.097 161.017 70.714 1.00 49.84 C
ATOM 8 O4' C B1387 47.334 161.943 69.627 1.00 48.46 O
ATOM 9 C3' C B1387 48.371 161.088 71.535 1.00 49.55 C
ATOM 10 O3' C B1387 48.558 159.932 72.338 1.00 49.00 O
ATOM 11 C2' C B1387 49.439 161.212 70.458 1.00 49.70 C
ATOM 12 O2' C B1387 49.780 159.976 69.863 1.00 49.58 O
ATOM 13 C1' C B1387 48.729 162.101 69.437 1.00 48.24 C
ATOM 14 N1 C B1387 49.058 163.521 69.594 1.00 48.12 N
ATOM 15 C2 C B1387 50.261 163.996 69.064 1.00 49.67 C
ATOM 16 O2 C B1387 51.030 163.198 68.498 1.00 50.11 O
ATOM 17 N3 C B1387 50.559 165.313 69.185 1.00 50.14 N
ATOM 18 C4 C B1387 49.712 166.135 69.810 1.00 49.97 C
ATOM 19 N4 C B1387 50.041 167.424 69.898 1.00 49.78 N
ATOM 20 C5 C B1387 48.490 165.672 70.371 1.00 49.97 C
ATOM 21 C6 C B1387 48.206 164.371 70.241 1.00 49.23 C
ATOM 22 P U B1388 49.167 160.088 73.812 1.00 50.28 P
ATOM 23 OP1 U B1388 49.198 158.746 74.433 1.00 51.02 O
ATOM 24 OP2 U B1388 48.442 161.190 74.488 1.00 51.23 O
ATOM 25 O5' U B1388 50.659 160.570 73.563 1.00 47.09 O
TER
ATOM 2 P C A1398 59.053 167.387 66.541 1.00 45.14 P
ATOM 3 OP1 C A1398 59.375 166.210 65.705 1.00 44.48 O
ATOM 4 OP2 C A1398 58.815 168.695 65.890 1.00 46.26 O
ATOM 5 O5' C A1398 57.788 167.044 67.441 1.00 44.16 O
ATOM 6 C5' C A1398 57.545 165.709 67.908 1.00 45.30 C
ATOM 7 C4' C A1398 56.089 165.547 68.258 1.00 46.56 C
ATOM 8 O4' C A1398 55.740 166.494 69.303 1.00 46.81 O
ATOM 9 C3' C A1398 55.139 165.875 67.124 1.00 47.70 C
ATOM 10 O3' C A1398 54.962 164.764 66.265 1.00 50.13 O
ATOM 11 C2' C A1398 53.875 166.278 67.865 1.00 47.36 C
ATOM 12 O2' C A1398 53.180 165.156 68.367 1.00 46.26 O
ATOM 13 C1' C A1398 54.466 167.062 69.038 1.00 46.62 C
ATOM 14 N1 C A1398 54.659 168.510 68.787 1.00 46.75 N
ATOM 15 C2 C A1398 53.561 169.378 68.872 1.00 45.34 C
ATOM 16 O2 C A1398 52.443 168.912 69.112 1.00 43.60 O
ATOM 17 N3 C A1398 53.755 170.707 68.689 1.00 45.73 N
ATOM 18 C4 C A1398 54.981 171.175 68.426 1.00 46.46 C
ATOM 19 N4 C A1398 55.137 172.492 68.280 1.00 45.16 N
ATOM 20 C5 C A1398 56.105 170.315 68.307 1.00 46.94 C
ATOM 21 C6 C A1398 55.902 169.004 68.491 1.00 47.59 C
ATOM 22 P U A1399 54.793 165.004 64.690 1.00 52.75 P
ATOM 23 OP1 U A1399 54.725 163.663 64.069 1.00 52.69 O
ATOM 24 OP2 U A1399 55.826 165.968 64.236 1.00 50.61 O
ATOM 25 O5' U A1399 53.364 165.694 64.578 1.00 52.51 O
TER
ATOM 1 O3' A B1386 43.540 163.328 72.027 1.00 59.02 O
ATOM 2 P C B1387 44.841 163.286 72.960 1.00 58.64 P
ATOM 3 OP1 C B1387 44.575 162.304 74.033 1.00 58.94 O
ATOM 4 OP2 C B1387 45.226 164.673 73.321 1.00 59.34 O
ATOM 5 O5' C B1387 45.967 162.702 72.000 1.00 54.82 O
ATOM 6 C5' C B1387 45.832 161.403 71.427 1.00 50.47 C
ATOM 7 C4' C B1387 47.097 161.017 70.714 1.00 49.84 C
ATOM 8 O4' C B1387 47.334 161.943 69.627 1.00 48.46 O
ATOM 9 C3' C B1387 48.371 161.088 71.535 1.00 49.55 C
ATOM 10 O3' C B1387 48.558 159.932 72.338 1.00 49.00 O
ATOM 11 C2' C B1387 49.439 161.212 70.458 1.00 49.70 C
ATOM 12 O2' C B1387 49.780 159.976 69.863 1.00 49.58 O
ATOM 13 C1' C B1387 48.729 162.101 69.437 1.00 48.24 C
ATOM 14 N1 C B1387 49.058 163.521 69.594 1.00 48.12 N
ATOM 15 C2 C B1387 50.261 163.996 69.064 1.00 49.67 C
ATOM 16 O2 C B1387 51.030 163.198 68.498 1.00 50.11 O
ATOM 17 N3 C B1387 50.559 165.313 69.185 1.00 50.14 N
ATOM 18 C4 C B1387 49.712 166.135 69.810 1.00 49.97 C
ATOM 19 N4 C B1387 50.041 167.424 69.898 1.00 49.78 N
ATOM 20 C5 C B1387 48.490 165.672 70.371 1.00 49.97 C
ATOM 21 C6 C B1387 48.206 164.371 70.241 1.00 49.23 C
ATOM 22 P U B1388 49.167 160.088 73.812 1.00 50.28 P
ATOM 23 OP1 U B1388 49.198 158.746 74.433 1.00 51.02 O
ATOM 24 OP2 U B1388 48.442 161.190 74.488 1.00 51.23 O
ATOM 25 O5' U B1388 50.659 160.570 73.563 1.00 47.09 O
TER
Atoms:
C2: (53.561,169.378,68.872)
OP1: (59.375,166.210,65.705)
OP2: (58.815,168.695,65.890)
C4: (54.981,171.175,68.426)
O5': (57.788,167.044,67.441)
C3': (55.139,165.875,67.124)
C1': (54.466,167.062,69.038)
O4': (55.740,166.494,69.303)
C5': (57.545,165.709,67.908)
P: (59.053,167.387,66.541)
O2: (52.443,168.912,69.112)
C4': (56.089,165.547,68.258)
C2': (53.875,166.278,67.865)
O2': (53.180,165.156,68.367)
N1: (54.659,168.510,68.787)
N3: (53.755,170.707,68.689)
N4: (55.137,172.492,68.280)
C6: (55.902,169.004,68.491)
C5: (56.105,170.315,68.307)
O3': (54.962,164.764,66.265)
OP1: (59.375,166.210,65.705)
OP2: (58.815,168.695,65.890)
C4: (54.981,171.175,68.426)
O5': (57.788,167.044,67.441)
C3': (55.139,165.875,67.124)
C1': (54.466,167.062,69.038)
O4': (55.740,166.494,69.303)
C5': (57.545,165.709,67.908)
P: (59.053,167.387,66.541)
O2: (52.443,168.912,69.112)
C4': (56.089,165.547,68.258)
C2': (53.875,166.278,67.865)
O2': (53.180,165.156,68.367)
N1: (54.659,168.510,68.787)
N3: (53.755,170.707,68.689)
N4: (55.137,172.492,68.280)
C6: (55.902,169.004,68.491)
C5: (56.105,170.315,68.307)
O3': (54.962,164.764,66.265)
C2: (50.261,163.996,69.064)
OP1: (44.575,162.304,74.033)
OP2: (45.226,164.673,73.321)
C4: (49.712,166.135,69.810)
O5': (45.967,162.702,72.000)
C3': (48.371,161.088,71.535)
C1': (48.729,162.101,69.437)
O4': (47.334,161.943,69.627)
C5': (45.832,161.403,71.427)
P: (44.841,163.286,72.960)
O2: (51.030,163.198,68.498)
C4': (47.097,161.017,70.714)
C2': (49.439,161.212,70.458)
O2': (49.780,159.976,69.863)
N1: (49.058,163.521,69.594)
N3: (50.559,165.313,69.185)
N4: (50.041,167.424,69.898)
C6: (48.206,164.371,70.241)
C5: (48.490,165.672,70.371)
O3': (48.558,159.932,72.338)
OP1: (44.575,162.304,74.033)
OP2: (45.226,164.673,73.321)
C4: (49.712,166.135,69.810)
O5': (45.967,162.702,72.000)
C3': (48.371,161.088,71.535)
C1': (48.729,162.101,69.437)
O4': (47.334,161.943,69.627)
C5': (45.832,161.403,71.427)
P: (44.841,163.286,72.960)
O2: (51.030,163.198,68.498)
C4': (47.097,161.017,70.714)
C2': (49.439,161.212,70.458)
O2': (49.780,159.976,69.863)
N1: (49.058,163.521,69.594)
N3: (50.559,165.313,69.185)
N4: (50.041,167.424,69.898)
C6: (48.206,164.371,70.241)
C5: (48.490,165.672,70.371)
O3': (48.558,159.932,72.338)
Image (generated by PyMOL):