Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01398:01387
Extra
PDB:
ATOM 1 O3' G A1397 59.999 167.312 67.668 1.00 37.90 O
ATOM 2 P C A1398 58.824 167.206 66.577 1.00 36.09 P
ATOM 3 OP1 C A1398 59.178 166.073 65.696 1.00 36.82 O
ATOM 4 OP2 C A1398 58.575 168.530 65.978 1.00 38.84 O
ATOM 5 O5' C A1398 57.543 166.811 67.428 1.00 36.48 O
ATOM 6 C5' C A1398 57.312 165.452 67.835 1.00 36.25 C
ATOM 7 C4' C A1398 55.863 165.267 68.202 1.00 36.71 C
ATOM 8 O4' C A1398 55.527 166.170 69.288 1.00 34.81 O
ATOM 9 C3' C A1398 54.882 165.612 67.096 1.00 37.67 C
ATOM 10 O3' C A1398 54.683 164.504 66.230 1.00 40.51 O
ATOM 11 C2' C A1398 53.635 165.986 67.879 1.00 37.01 C
ATOM 12 O2' C A1398 52.957 164.846 68.368 1.00 38.07 O
ATOM 13 C1' C A1398 54.251 166.738 69.061 1.00 35.61 C
ATOM 14 N1 C A1398 54.440 168.183 68.830 1.00 35.77 N
ATOM 15 C2 C A1398 53.331 169.036 68.860 1.00 35.12 C
ATOM 16 O2 C A1398 52.207 168.555 69.037 1.00 34.02 O
ATOM 17 N3 C A1398 53.518 170.363 68.690 1.00 34.83 N
ATOM 18 C4 C A1398 54.746 170.845 68.490 1.00 36.10 C
ATOM 19 N4 C A1398 54.891 172.164 68.341 1.00 36.39 N
ATOM 20 C5 C A1398 55.885 170.000 68.433 1.00 36.86 C
ATOM 21 C6 C A1398 55.690 168.691 68.603 1.00 36.78 C
ATOM 22 P U A1399 54.599 164.741 64.648 1.00 44.59 P
ATOM 23 OP1 U A1399 54.568 163.398 64.026 1.00 44.13 O
ATOM 24 OP2 U A1399 55.659 165.704 64.256 1.00 44.88 O
ATOM 25 O5' U A1399 53.187 165.444 64.441 1.00 44.35 O
TER
ATOM 1 O3' A B1386 43.246 163.192 71.930 1.00 51.60 O
ATOM 2 P C B1387 44.489 163.128 72.939 1.00 50.37 P
ATOM 3 OP1 C B1387 44.177 162.141 73.993 1.00 49.90 O
ATOM 4 OP2 C B1387 44.857 164.511 73.325 1.00 51.20 O
ATOM 5 O5' C B1387 45.663 162.548 72.034 1.00 48.74 O
ATOM 6 C5' C B1387 45.523 161.285 71.379 1.00 45.00 C
ATOM 7 C4' C B1387 46.808 160.905 70.694 1.00 43.76 C
ATOM 8 O4' C B1387 47.079 161.833 69.616 1.00 43.22 O
ATOM 9 C3' C B1387 48.062 160.960 71.546 1.00 43.44 C
ATOM 10 O3' C B1387 48.220 159.802 72.350 1.00 43.34 O
ATOM 11 C2' C B1387 49.159 161.072 70.497 1.00 44.15 C
ATOM 12 O2' C B1387 49.497 159.829 69.912 1.00 44.24 O
ATOM 13 C1' C B1387 48.485 161.972 69.457 1.00 43.58 C
ATOM 14 N1 C B1387 48.844 163.396 69.605 1.00 42.92 N
ATOM 15 C2 C B1387 50.089 163.839 69.125 1.00 42.97 C
ATOM 16 O2 C B1387 50.861 163.024 68.601 1.00 44.55 O
ATOM 17 N3 C B1387 50.417 165.142 69.251 1.00 42.38 N
ATOM 18 C4 C B1387 49.570 165.990 69.834 1.00 42.95 C
ATOM 19 N4 C B1387 49.939 167.264 69.942 1.00 43.02 N
ATOM 20 C5 C B1387 48.304 165.569 70.335 1.00 43.71 C
ATOM 21 C6 C B1387 47.984 164.277 70.199 1.00 43.12 C
ATOM 22 P U B1388 48.783 159.949 73.844 1.00 45.34 P
ATOM 23 OP1 U B1388 48.768 158.601 74.475 1.00 45.22 O
ATOM 24 OP2 U B1388 48.063 161.073 74.493 1.00 46.05 O
ATOM 25 O5' U B1388 50.294 160.387 73.638 1.00 42.33 O
TER
ATOM 2 P C A1398 58.824 167.206 66.577 1.00 36.09 P
ATOM 3 OP1 C A1398 59.178 166.073 65.696 1.00 36.82 O
ATOM 4 OP2 C A1398 58.575 168.530 65.978 1.00 38.84 O
ATOM 5 O5' C A1398 57.543 166.811 67.428 1.00 36.48 O
ATOM 6 C5' C A1398 57.312 165.452 67.835 1.00 36.25 C
ATOM 7 C4' C A1398 55.863 165.267 68.202 1.00 36.71 C
ATOM 8 O4' C A1398 55.527 166.170 69.288 1.00 34.81 O
ATOM 9 C3' C A1398 54.882 165.612 67.096 1.00 37.67 C
ATOM 10 O3' C A1398 54.683 164.504 66.230 1.00 40.51 O
ATOM 11 C2' C A1398 53.635 165.986 67.879 1.00 37.01 C
ATOM 12 O2' C A1398 52.957 164.846 68.368 1.00 38.07 O
ATOM 13 C1' C A1398 54.251 166.738 69.061 1.00 35.61 C
ATOM 14 N1 C A1398 54.440 168.183 68.830 1.00 35.77 N
ATOM 15 C2 C A1398 53.331 169.036 68.860 1.00 35.12 C
ATOM 16 O2 C A1398 52.207 168.555 69.037 1.00 34.02 O
ATOM 17 N3 C A1398 53.518 170.363 68.690 1.00 34.83 N
ATOM 18 C4 C A1398 54.746 170.845 68.490 1.00 36.10 C
ATOM 19 N4 C A1398 54.891 172.164 68.341 1.00 36.39 N
ATOM 20 C5 C A1398 55.885 170.000 68.433 1.00 36.86 C
ATOM 21 C6 C A1398 55.690 168.691 68.603 1.00 36.78 C
ATOM 22 P U A1399 54.599 164.741 64.648 1.00 44.59 P
ATOM 23 OP1 U A1399 54.568 163.398 64.026 1.00 44.13 O
ATOM 24 OP2 U A1399 55.659 165.704 64.256 1.00 44.88 O
ATOM 25 O5' U A1399 53.187 165.444 64.441 1.00 44.35 O
TER
ATOM 1 O3' A B1386 43.246 163.192 71.930 1.00 51.60 O
ATOM 2 P C B1387 44.489 163.128 72.939 1.00 50.37 P
ATOM 3 OP1 C B1387 44.177 162.141 73.993 1.00 49.90 O
ATOM 4 OP2 C B1387 44.857 164.511 73.325 1.00 51.20 O
ATOM 5 O5' C B1387 45.663 162.548 72.034 1.00 48.74 O
ATOM 6 C5' C B1387 45.523 161.285 71.379 1.00 45.00 C
ATOM 7 C4' C B1387 46.808 160.905 70.694 1.00 43.76 C
ATOM 8 O4' C B1387 47.079 161.833 69.616 1.00 43.22 O
ATOM 9 C3' C B1387 48.062 160.960 71.546 1.00 43.44 C
ATOM 10 O3' C B1387 48.220 159.802 72.350 1.00 43.34 O
ATOM 11 C2' C B1387 49.159 161.072 70.497 1.00 44.15 C
ATOM 12 O2' C B1387 49.497 159.829 69.912 1.00 44.24 O
ATOM 13 C1' C B1387 48.485 161.972 69.457 1.00 43.58 C
ATOM 14 N1 C B1387 48.844 163.396 69.605 1.00 42.92 N
ATOM 15 C2 C B1387 50.089 163.839 69.125 1.00 42.97 C
ATOM 16 O2 C B1387 50.861 163.024 68.601 1.00 44.55 O
ATOM 17 N3 C B1387 50.417 165.142 69.251 1.00 42.38 N
ATOM 18 C4 C B1387 49.570 165.990 69.834 1.00 42.95 C
ATOM 19 N4 C B1387 49.939 167.264 69.942 1.00 43.02 N
ATOM 20 C5 C B1387 48.304 165.569 70.335 1.00 43.71 C
ATOM 21 C6 C B1387 47.984 164.277 70.199 1.00 43.12 C
ATOM 22 P U B1388 48.783 159.949 73.844 1.00 45.34 P
ATOM 23 OP1 U B1388 48.768 158.601 74.475 1.00 45.22 O
ATOM 24 OP2 U B1388 48.063 161.073 74.493 1.00 46.05 O
ATOM 25 O5' U B1388 50.294 160.387 73.638 1.00 42.33 O
TER
Atoms:
C2: (53.331,169.036,68.860)
OP1: (59.178,166.073,65.696)
OP2: (58.575,168.530,65.978)
C4: (54.746,170.845,68.490)
O5': (57.543,166.811,67.428)
C3': (54.882,165.612,67.096)
C1': (54.251,166.738,69.061)
O4': (55.527,166.170,69.288)
C5': (57.312,165.452,67.835)
P: (58.824,167.206,66.577)
O2: (52.207,168.555,69.037)
C4': (55.863,165.267,68.202)
C2': (53.635,165.986,67.879)
O2': (52.957,164.846,68.368)
N1: (54.440,168.183,68.830)
N3: (53.518,170.363,68.690)
N4: (54.891,172.164,68.341)
C6: (55.690,168.691,68.603)
C5: (55.885,170.000,68.433)
O3': (54.683,164.504,66.230)
OP1: (59.178,166.073,65.696)
OP2: (58.575,168.530,65.978)
C4: (54.746,170.845,68.490)
O5': (57.543,166.811,67.428)
C3': (54.882,165.612,67.096)
C1': (54.251,166.738,69.061)
O4': (55.527,166.170,69.288)
C5': (57.312,165.452,67.835)
P: (58.824,167.206,66.577)
O2: (52.207,168.555,69.037)
C4': (55.863,165.267,68.202)
C2': (53.635,165.986,67.879)
O2': (52.957,164.846,68.368)
N1: (54.440,168.183,68.830)
N3: (53.518,170.363,68.690)
N4: (54.891,172.164,68.341)
C6: (55.690,168.691,68.603)
C5: (55.885,170.000,68.433)
O3': (54.683,164.504,66.230)
C2: (50.089,163.839,69.125)
OP1: (44.177,162.141,73.993)
OP2: (44.857,164.511,73.325)
C4: (49.570,165.990,69.834)
O5': (45.663,162.548,72.034)
C3': (48.062,160.960,71.546)
C1': (48.485,161.972,69.457)
O4': (47.079,161.833,69.616)
C5': (45.523,161.285,71.379)
P: (44.489,163.128,72.939)
O2: (50.861,163.024,68.601)
C4': (46.808,160.905,70.694)
C2': (49.159,161.072,70.497)
O2': (49.497,159.829,69.912)
N1: (48.844,163.396,69.605)
N3: (50.417,165.142,69.251)
N4: (49.939,167.264,69.942)
C6: (47.984,164.277,70.199)
C5: (48.304,165.569,70.335)
O3': (48.220,159.802,72.350)
OP1: (44.177,162.141,73.993)
OP2: (44.857,164.511,73.325)
C4: (49.570,165.990,69.834)
O5': (45.663,162.548,72.034)
C3': (48.062,160.960,71.546)
C1': (48.485,161.972,69.457)
O4': (47.079,161.833,69.616)
C5': (45.523,161.285,71.379)
P: (44.489,163.128,72.939)
O2: (50.861,163.024,68.601)
C4': (46.808,160.905,70.694)
C2': (49.159,161.072,70.497)
O2': (49.497,159.829,69.912)
N1: (48.844,163.396,69.605)
N3: (50.417,165.142,69.251)
N4: (49.939,167.264,69.942)
C6: (47.984,164.277,70.199)
C5: (48.304,165.569,70.335)
O3': (48.220,159.802,72.350)
Image (generated by PyMOL):