Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOG:A59:A34
Extra
PDB:
ATOM 1 O3' C A 58 9.568 12.470 17.852 1.00 42.64 O
ATOM 2 P C A 59 8.078 12.074 17.400 1.00 42.12 P
ATOM 3 OP1 C A 59 7.177 12.563 18.486 1.00 42.40 O
ATOM 4 OP2 C A 59 8.046 10.628 17.012 1.00 41.57 O
ATOM 5 O5' C A 59 7.802 12.945 16.094 1.00 41.40 O
ATOM 6 C5' C A 59 7.947 14.360 16.137 1.00 40.69 C
ATOM 7 C4' C A 59 7.789 14.952 14.755 1.00 40.46 C
ATOM 8 O4' C A 59 8.903 14.500 13.927 1.00 40.01 O
ATOM 9 C3' C A 59 6.562 14.500 13.977 1.00 40.65 C
ATOM 10 O3' C A 59 5.377 15.219 14.326 1.00 42.54 O
ATOM 11 C2' C A 59 6.991 14.770 12.540 1.00 39.62 C
ATOM 12 O2' C A 59 6.965 16.160 12.247 1.00 40.55 O
ATOM 13 C1' C A 59 8.458 14.335 12.585 1.00 38.97 C
ATOM 14 N1 C A 59 8.641 12.927 12.190 1.00 36.28 N
ATOM 15 C2 C A 59 8.681 12.621 10.820 1.00 35.22 C
ATOM 16 O2 C A 59 8.563 13.554 9.991 1.00 35.11 O
ATOM 17 N3 C A 59 8.842 11.342 10.432 1.00 34.05 N
ATOM 18 C4 C A 59 8.958 10.376 11.346 1.00 33.74 C
ATOM 19 N4 C A 59 9.101 9.126 10.912 1.00 33.72 N
ATOM 20 C5 C A 59 8.929 10.656 12.751 1.00 34.72 C
ATOM 21 C6 C A 59 8.768 11.937 13.123 1.00 35.16 C
ATOM 22 P A A 60 3.934 14.465 14.285 1.00 43.08 P
ATOM 23 OP1 A A 60 2.951 15.329 15.008 1.00 43.71 O
ATOM 24 OP2 A A 60 4.138 13.056 14.726 1.00 43.24 O
ATOM 25 O5' A A 60 3.570 14.453 12.731 1.00 43.19 O
TER
ATOM 1 O3' U B 33 5.093 19.938 4.175 1.00 44.43 O
ATOM 2 P C B 34 6.351 20.889 4.519 1.00 45.25 P
ATOM 3 OP1 C B 34 6.286 22.104 3.656 1.00 45.46 O
ATOM 4 OP2 C B 34 7.612 20.097 4.567 1.00 44.27 O
ATOM 5 O5' C B 34 6.040 21.351 6.011 1.00 45.51 O
ATOM 6 C5' C B 34 4.989 22.277 6.280 1.00 45.26 C
ATOM 7 C4' C B 34 4.599 22.195 7.733 1.00 45.08 C
ATOM 8 O4' C B 34 3.889 20.947 7.946 1.00 45.53 O
ATOM 9 C3' C B 34 5.766 22.129 8.703 1.00 45.17 C
ATOM 10 O3' C B 34 6.194 23.431 9.068 1.00 45.39 O
ATOM 11 C2' C B 34 5.147 21.426 9.897 1.00 45.07 C
ATOM 12 O2' C B 34 4.339 22.297 10.660 1.00 44.93 O
ATOM 13 C1' C B 34 4.271 20.386 9.200 1.00 45.08 C
ATOM 14 N1 C B 34 4.990 19.132 8.940 1.00 43.88 N
ATOM 15 C2 C B 34 5.507 18.420 10.024 1.00 44.05 C
ATOM 16 O2 C B 34 5.363 18.900 11.174 1.00 43.36 O
ATOM 17 N3 C B 34 6.149 17.235 9.800 1.00 43.69 N
ATOM 18 C4 C B 34 6.276 16.777 8.540 1.00 44.18 C
ATOM 19 N4 C B 34 6.899 15.595 8.342 1.00 43.30 N
ATOM 20 C5 C B 34 5.767 17.503 7.420 1.00 44.35 C
ATOM 21 C6 C B 34 5.141 18.664 7.665 1.00 44.36 C
ATOM 22 P U B 35 7.764 23.763 9.096 1.00 46.24 P
ATOM 23 OP1 U B 35 7.970 25.061 9.804 1.00 46.72 O
ATOM 24 OP2 U B 35 8.267 23.591 7.701 1.00 46.67 O
ATOM 25 O5' U B 35 8.379 22.605 10.003 1.00 45.92 O
TER
ATOM 2 P C A 59 8.078 12.074 17.400 1.00 42.12 P
ATOM 3 OP1 C A 59 7.177 12.563 18.486 1.00 42.40 O
ATOM 4 OP2 C A 59 8.046 10.628 17.012 1.00 41.57 O
ATOM 5 O5' C A 59 7.802 12.945 16.094 1.00 41.40 O
ATOM 6 C5' C A 59 7.947 14.360 16.137 1.00 40.69 C
ATOM 7 C4' C A 59 7.789 14.952 14.755 1.00 40.46 C
ATOM 8 O4' C A 59 8.903 14.500 13.927 1.00 40.01 O
ATOM 9 C3' C A 59 6.562 14.500 13.977 1.00 40.65 C
ATOM 10 O3' C A 59 5.377 15.219 14.326 1.00 42.54 O
ATOM 11 C2' C A 59 6.991 14.770 12.540 1.00 39.62 C
ATOM 12 O2' C A 59 6.965 16.160 12.247 1.00 40.55 O
ATOM 13 C1' C A 59 8.458 14.335 12.585 1.00 38.97 C
ATOM 14 N1 C A 59 8.641 12.927 12.190 1.00 36.28 N
ATOM 15 C2 C A 59 8.681 12.621 10.820 1.00 35.22 C
ATOM 16 O2 C A 59 8.563 13.554 9.991 1.00 35.11 O
ATOM 17 N3 C A 59 8.842 11.342 10.432 1.00 34.05 N
ATOM 18 C4 C A 59 8.958 10.376 11.346 1.00 33.74 C
ATOM 19 N4 C A 59 9.101 9.126 10.912 1.00 33.72 N
ATOM 20 C5 C A 59 8.929 10.656 12.751 1.00 34.72 C
ATOM 21 C6 C A 59 8.768 11.937 13.123 1.00 35.16 C
ATOM 22 P A A 60 3.934 14.465 14.285 1.00 43.08 P
ATOM 23 OP1 A A 60 2.951 15.329 15.008 1.00 43.71 O
ATOM 24 OP2 A A 60 4.138 13.056 14.726 1.00 43.24 O
ATOM 25 O5' A A 60 3.570 14.453 12.731 1.00 43.19 O
TER
ATOM 1 O3' U B 33 5.093 19.938 4.175 1.00 44.43 O
ATOM 2 P C B 34 6.351 20.889 4.519 1.00 45.25 P
ATOM 3 OP1 C B 34 6.286 22.104 3.656 1.00 45.46 O
ATOM 4 OP2 C B 34 7.612 20.097 4.567 1.00 44.27 O
ATOM 5 O5' C B 34 6.040 21.351 6.011 1.00 45.51 O
ATOM 6 C5' C B 34 4.989 22.277 6.280 1.00 45.26 C
ATOM 7 C4' C B 34 4.599 22.195 7.733 1.00 45.08 C
ATOM 8 O4' C B 34 3.889 20.947 7.946 1.00 45.53 O
ATOM 9 C3' C B 34 5.766 22.129 8.703 1.00 45.17 C
ATOM 10 O3' C B 34 6.194 23.431 9.068 1.00 45.39 O
ATOM 11 C2' C B 34 5.147 21.426 9.897 1.00 45.07 C
ATOM 12 O2' C B 34 4.339 22.297 10.660 1.00 44.93 O
ATOM 13 C1' C B 34 4.271 20.386 9.200 1.00 45.08 C
ATOM 14 N1 C B 34 4.990 19.132 8.940 1.00 43.88 N
ATOM 15 C2 C B 34 5.507 18.420 10.024 1.00 44.05 C
ATOM 16 O2 C B 34 5.363 18.900 11.174 1.00 43.36 O
ATOM 17 N3 C B 34 6.149 17.235 9.800 1.00 43.69 N
ATOM 18 C4 C B 34 6.276 16.777 8.540 1.00 44.18 C
ATOM 19 N4 C B 34 6.899 15.595 8.342 1.00 43.30 N
ATOM 20 C5 C B 34 5.767 17.503 7.420 1.00 44.35 C
ATOM 21 C6 C B 34 5.141 18.664 7.665 1.00 44.36 C
ATOM 22 P U B 35 7.764 23.763 9.096 1.00 46.24 P
ATOM 23 OP1 U B 35 7.970 25.061 9.804 1.00 46.72 O
ATOM 24 OP2 U B 35 8.267 23.591 7.701 1.00 46.67 O
ATOM 25 O5' U B 35 8.379 22.605 10.003 1.00 45.92 O
TER
Atoms:
C2: (8.681,12.621,10.820)
OP1: (7.177,12.563,18.486)
OP2: (8.046,10.628,17.012)
C4: (8.958,10.376,11.346)
O5': (7.802,12.945,16.094)
C3': (6.562,14.500,13.977)
C1': (8.458,14.335,12.585)
O4': (8.903,14.500,13.927)
C5': (7.947,14.360,16.137)
P: (8.078,12.074,17.400)
O2: (8.563,13.554,9.991)
C4': (7.789,14.952,14.755)
C2': (6.991,14.770,12.540)
O2': (6.965,16.160,12.247)
N1: (8.641,12.927,12.190)
N3: (8.842,11.342,10.432)
N4: (9.101,9.126,10.912)
C6: (8.768,11.937,13.123)
C5: (8.929,10.656,12.751)
O3': (5.377,15.219,14.326)
OP1: (7.177,12.563,18.486)
OP2: (8.046,10.628,17.012)
C4: (8.958,10.376,11.346)
O5': (7.802,12.945,16.094)
C3': (6.562,14.500,13.977)
C1': (8.458,14.335,12.585)
O4': (8.903,14.500,13.927)
C5': (7.947,14.360,16.137)
P: (8.078,12.074,17.400)
O2: (8.563,13.554,9.991)
C4': (7.789,14.952,14.755)
C2': (6.991,14.770,12.540)
O2': (6.965,16.160,12.247)
N1: (8.641,12.927,12.190)
N3: (8.842,11.342,10.432)
N4: (9.101,9.126,10.912)
C6: (8.768,11.937,13.123)
C5: (8.929,10.656,12.751)
O3': (5.377,15.219,14.326)
C2: (5.507,18.420,10.024)
OP1: (6.286,22.104,3.656)
OP2: (7.612,20.097,4.567)
C4: (6.276,16.777,8.540)
O5': (6.040,21.351,6.011)
C3': (5.766,22.129,8.703)
C1': (4.271,20.386,9.200)
O4': (3.889,20.947,7.946)
C5': (4.989,22.277,6.280)
P: (6.351,20.889,4.519)
O2: (5.363,18.900,11.174)
C4': (4.599,22.195,7.733)
C2': (5.147,21.426,9.897)
O2': (4.339,22.297,10.660)
N1: (4.990,19.132,8.940)
N3: (6.149,17.235,9.800)
N4: (6.899,15.595,8.342)
C6: (5.141,18.664,7.665)
C5: (5.767,17.503,7.420)
O3': (6.194,23.431,9.068)
OP1: (6.286,22.104,3.656)
OP2: (7.612,20.097,4.567)
C4: (6.276,16.777,8.540)
O5': (6.040,21.351,6.011)
C3': (5.766,22.129,8.703)
C1': (4.271,20.386,9.200)
O4': (3.889,20.947,7.946)
C5': (4.989,22.277,6.280)
P: (6.351,20.889,4.519)
O2: (5.363,18.900,11.174)
C4': (4.599,22.195,7.733)
C2': (5.147,21.426,9.897)
O2': (4.339,22.297,10.660)
N1: (4.990,19.132,8.940)
N3: (6.149,17.235,9.800)
N4: (6.899,15.595,8.342)
C6: (5.141,18.664,7.665)
C5: (5.767,17.503,7.420)
O3': (6.194,23.431,9.068)
Image (generated by PyMOL):