ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MXH:R86:R9

Extra

PDB:
ATOM 1 O3' C A 85 -9.117 -11.298 20.859 1.00 46.72 O
ATOM 2 P C A 86 -10.050 -11.140 22.149 1.00 49.46 P
ATOM 3 OP1 C A 86 -9.489 -11.989 23.224 1.00 52.52 O
ATOM 4 OP2 C A 86 -11.455 -11.325 21.721 1.00 49.01 O
ATOM 5 O5' C A 86 -9.855 -9.603 22.547 1.00 49.39 O
ATOM 6 C5' C A 86 -8.546 -9.081 22.747 1.00 47.40 C
ATOM 7 C4' C A 86 -8.606 -7.713 23.403 1.00 46.72 C
ATOM 8 O4' C A 86 -8.662 -6.689 22.377 1.00 45.67 O
ATOM 9 C3' C A 86 -9.826 -7.475 24.282 1.00 47.47 C
ATOM 10 O3' C A 86 -9.547 -7.869 25.619 1.00 51.43 O
ATOM 11 C2' C A 86 -10.013 -5.966 24.171 1.00 46.01 C
ATOM 12 O2' C A 86 -9.146 -5.251 25.029 1.00 46.62 O
ATOM 13 C1' C A 86 -9.635 -5.719 22.715 1.00 44.53 C
ATOM 14 N1 C A 86 -10.782 -5.856 21.772 1.00 41.27 N
ATOM 15 C2 C A 86 -11.524 -4.725 21.415 1.00 43.35 C
ATOM 16 O2 C A 86 -11.214 -3.625 21.889 1.00 44.67 O
ATOM 17 N3 C A 86 -12.564 -4.867 20.556 1.00 42.48 N
ATOM 18 C4 C A 86 -12.866 -6.070 20.067 1.00 41.03 C
ATOM 19 N4 C A 86 -13.900 -6.161 19.224 1.00 40.53 N
ATOM 20 C5 C A 86 -12.122 -7.234 20.420 1.00 39.57 C
ATOM 21 C6 C A 86 -11.099 -7.082 21.267 1.00 41.27 C
ATOM 22 P G A 87 -10.747 -8.236 26.612 1.00 53.89 P
ATOM 23 OP1 G A 87 -10.191 -8.336 27.980 1.00 57.66 O
ATOM 24 OP2 G A 87 -11.487 -9.378 26.031 1.00 55.85 O
ATOM 25 O5' G A 87 -11.688 -6.945 26.528 1.00 52.42 O
TER

ATOM 1 O3' A B 8 -6.652 4.690 25.457 1.00 64.81 O
ATOM 2 P C B 9 -5.253 3.919 25.339 1.00 63.02 P
ATOM 3 OP1 C B 9 -4.219 4.773 25.970 1.00 68.60 O
ATOM 4 OP2 C B 9 -5.095 3.486 23.932 1.00 56.18 O
ATOM 5 O5' C B 9 -5.444 2.623 26.262 1.00 63.42 O
ATOM 6 C5' C B 9 -5.378 2.712 27.690 1.00 69.97 C
ATOM 7 C4' C B 9 -5.710 1.372 28.327 1.00 70.13 C
ATOM 8 O4' C B 9 -7.028 0.936 27.910 1.00 66.89 O
ATOM 9 C3' C B 9 -4.793 0.232 27.917 1.00 67.68 C
ATOM 10 O3' C B 9 -3.629 0.245 28.732 1.00 73.56 O
ATOM 11 C2' C B 9 -5.663 -1.001 28.158 1.00 66.31 C
ATOM 12 O2' C B 9 -5.621 -1.459 29.498 1.00 71.37 O
ATOM 13 C1' C B 9 -7.062 -0.482 27.819 1.00 64.35 C
ATOM 14 N1 C B 9 -7.570 -0.898 26.454 1.00 58.04 N
ATOM 15 C2 C B 9 -8.180 -2.155 26.275 1.00 56.19 C
ATOM 16 O2 C B 9 -8.297 -2.922 27.239 1.00 59.00 O
ATOM 17 N3 C B 9 -8.631 -2.499 25.036 1.00 51.57 N
ATOM 18 C4 C B 9 -8.494 -1.650 24.010 1.00 50.15 C
ATOM 19 N4 C B 9 -8.948 -2.025 22.810 1.00 46.76 N
ATOM 20 C5 C B 9 -7.877 -0.372 24.169 1.00 51.96 C
ATOM 21 C6 C B 9 -7.437 -0.044 25.391 1.00 55.11 C
ATOM 22 P A B 10 -2.174 0.197 28.066 1.00 73.36 P
ATOM 23 OP1 A B 10 -1.177 0.457 29.129 1.00 80.02 O
ATOM 24 OP2 A B 10 -2.193 1.044 26.853 1.00 71.53 O
ATOM 25 O5' A B 10 -2.046 -1.325 27.594 1.00 71.33 O
TER

Atoms:
C2: (-11.524,-4.725,21.415)
OP1: (-9.489,-11.989,23.224)
OP2: (-11.455,-11.325,21.721)
C4: (-12.866,-6.070,20.067)
O5': (-9.855,-9.603,22.547)
C3': (-9.826,-7.475,24.282)
C1': (-9.635,-5.719,22.715)
O4': (-8.662,-6.689,22.377)
C5': (-8.546,-9.081,22.747)
P: (-10.050,-11.140,22.149)
O2: (-11.214,-3.625,21.889)
C4': (-8.606,-7.713,23.403)
C2': (-10.013,-5.966,24.171)
O2': (-9.146,-5.251,25.029)
N1: (-10.782,-5.856,21.772)
N3: (-12.564,-4.867,20.556)
N4: (-13.900,-6.161,19.224)
C6: (-11.099,-7.082,21.267)
C5: (-12.122,-7.234,20.420)
O3': (-9.547,-7.869,25.619)
C2: (-8.180,-2.155,26.275)
OP1: (-4.219,4.773,25.970)
OP2: (-5.095,3.486,23.932)
C4: (-8.494,-1.650,24.010)
O5': (-5.444,2.623,26.262)
C3': (-4.793,0.232,27.917)
C1': (-7.062,-0.482,27.819)
O4': (-7.028,0.936,27.910)
C5': (-5.378,2.712,27.690)
P: (-5.253,3.919,25.339)
O2: (-8.297,-2.922,27.239)
C4': (-5.710,1.372,28.327)
C2': (-5.663,-1.001,28.158)
O2': (-5.621,-1.459,29.498)
N1: (-7.570,-0.898,26.454)
N3: (-8.631,-2.499,25.036)
N4: (-8.948,-2.025,22.810)
C6: (-7.437,-0.044,25.391)
C5: (-7.877,-0.372,24.169)
O3': (-3.629,0.245,28.732)
Image (generated by PyMOL):
PyMOL image
show in jmol