ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUT:R52:R26

Extra

PDB:
ATOM 1 O3' C A 51 -6.022 6.566 -16.870 1.00 62.58 O
ATOM 2 P U A 52 -6.083 6.604 -18.474 1.00 63.90 P
ATOM 3 OP1 U A 52 -5.061 7.572 -18.928 1.00 64.63 O
ATOM 4 OP2 U A 52 -7.492 6.783 -18.893 1.00 65.56 O
ATOM 5 O5' U A 52 -5.624 5.134 -18.900 1.00 60.92 O
ATOM 6 C5' U A 52 -4.312 4.681 -18.600 1.00 57.19 C
ATOM 7 C4' U A 52 -4.195 3.212 -18.928 1.00 55.94 C
ATOM 8 O4' U A 52 -5.263 2.494 -18.276 1.00 55.15 O
ATOM 9 C3' U A 52 -4.387 2.922 -20.400 1.00 59.08 C
ATOM 10 O3' U A 52 -3.141 2.969 -21.064 1.00 61.21 O
ATOM 11 C2' U A 52 -4.963 1.518 -20.413 1.00 59.24 C
ATOM 12 O2' U A 52 -3.977 0.533 -20.627 1.00 60.43 O
ATOM 13 C1' U A 52 -5.580 1.344 -19.032 1.00 56.68 C
ATOM 14 N1 U A 52 -7.062 1.159 -19.103 1.00 58.29 N
ATOM 15 C2 U A 52 -7.587 0.028 -19.705 1.00 59.34 C
ATOM 16 O2 U A 52 -6.923 -0.862 -20.200 1.00 60.65 O
ATOM 17 N3 U A 52 -8.954 -0.040 -19.712 1.00 61.02 N
ATOM 18 C4 U A 52 -9.839 0.881 -19.197 1.00 61.84 C
ATOM 19 O4 U A 52 -11.039 0.666 -19.289 1.00 64.38 O
ATOM 20 C5 U A 52 -9.228 2.036 -18.593 1.00 61.10 C
ATOM 21 C6 U A 52 -7.891 2.127 -18.566 1.00 59.74 C
ATOM 22 P A A 53 -2.886 4.057 -22.203 1.00 65.23 P
ATOM 23 OP1 A A 53 -1.415 4.149 -22.378 1.00 64.81 O
ATOM 24 OP2 A A 53 -3.684 5.262 -21.871 1.00 65.89 O
ATOM 25 O5' A A 53 -3.540 3.423 -23.516 1.00 68.27 O
TER

ATOM 1 O3' A B 25 4.862 -1.640 -21.778 1.00 71.24 O
ATOM 2 P A B 26 5.208 -1.549 -20.215 1.00 70.40 P
ATOM 3 OP1 A B 26 6.436 -0.743 -20.050 1.00 69.70 O
ATOM 4 OP2 A B 26 5.177 -2.918 -19.658 1.00 69.88 O
ATOM 5 O5' A B 26 3.965 -0.722 -19.638 1.00 68.90 O
ATOM 6 C5' A B 26 3.677 0.599 -20.118 1.00 69.92 C
ATOM 7 C4' A B 26 2.192 0.932 -20.040 1.00 69.98 C
ATOM 8 O4' A B 26 1.407 -0.108 -20.680 1.00 70.97 O
ATOM 9 C3' A B 26 1.595 1.028 -18.639 1.00 67.05 C
ATOM 10 O3' A B 26 1.833 2.310 -18.057 1.00 64.44 O
ATOM 11 C2' A B 26 0.109 0.783 -18.900 1.00 67.76 C
ATOM 12 O2' A B 26 -0.590 1.965 -19.242 1.00 67.99 O
ATOM 13 C1' A B 26 0.124 -0.194 -20.077 1.00 69.55 C
ATOM 14 N9 A B 26 -0.148 -1.594 -19.724 1.00 68.74 N
ATOM 15 C8 A B 26 0.770 -2.544 -19.374 1.00 68.70 C
ATOM 16 N7 A B 26 0.255 -3.722 -19.114 1.00 68.94 N
ATOM 17 C5 A B 26 -1.100 -3.546 -19.307 1.00 69.12 C
ATOM 18 C6 A B 26 -2.204 -4.421 -19.193 1.00 69.35 C
ATOM 19 N6 A B 26 -2.105 -5.704 -18.839 1.00 69.23 N
ATOM 20 N1 A B 26 -3.432 -3.930 -19.454 1.00 70.75 N
ATOM 21 C2 A B 26 -3.543 -2.643 -19.807 1.00 71.93 C
ATOM 22 N3 A B 26 -2.579 -1.728 -19.950 1.00 71.48 N
ATOM 23 C4 A B 26 -1.366 -2.240 -19.683 1.00 69.54 C
ATOM 24 P A B 27 2.009 2.469 -16.471 1.00 63.07 P
ATOM 25 OP1 A B 27 2.406 3.870 -16.216 1.00 63.42 O
ATOM 26 OP2 A B 27 2.886 1.383 -15.993 1.00 63.34 O
ATOM 27 O5' A B 27 0.539 2.216 -15.873 1.00 62.79 O
TER

Atoms:
C4: (-9.839,0.881,-19.197)
N3: (-8.954,-0.040,-19.712)
OP1: (-5.061,7.572,-18.928)
OP2: (-7.492,6.783,-18.893)
C2: (-7.587,0.028,-19.705)
C1': (-5.580,1.344,-19.032)
C3': (-4.387,2.922,-20.400)
O5': (-5.624,5.134,-18.900)
O4': (-5.263,2.494,-18.276)
C5': (-4.312,4.681,-18.600)
P: (-6.083,6.604,-18.474)
C4': (-4.195,3.212,-18.928)
C2': (-4.963,1.518,-20.413)
O2': (-3.977,0.533,-20.627)
N1: (-7.062,1.159,-19.103)
O4: (-11.039,0.666,-19.289)
O2: (-6.923,-0.862,-20.200)
C6: (-7.891,2.127,-18.566)
C5: (-9.228,2.036,-18.593)
O3': (-3.141,2.969,-21.064)
OP1: (6.436,-0.743,-20.050)
OP2: (5.177,-2.918,-19.658)
C3': (1.595,1.028,-18.639)
C1': (0.124,-0.194,-20.077)
C5': (3.677,0.599,-20.118)
O4': (1.407,-0.108,-20.680)
C8: (0.770,-2.544,-19.374)
O2': (-0.590,1.965,-19.242)
C6: (-2.204,-4.421,-19.193)
C5: (-1.100,-3.546,-19.307)
C4: (-1.366,-2.240,-19.683)
P: (5.208,-1.549,-20.215)
C4': (2.192,0.932,-20.040)
C2': (0.109,0.783,-18.900)
C2: (-3.543,-2.643,-19.807)
N1: (-3.432,-3.930,-19.454)
N3: (-2.579,-1.728,-19.950)
N6: (-2.105,-5.704,-18.839)
N7: (0.255,-3.722,-19.114)
N9: (-0.148,-1.594,-19.724)
O5': (3.965,-0.722,-19.638)
O3': (1.833,2.310,-18.057)
Image (generated by PyMOL):
PyMOL image
show in jmol