ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q93:C20:C6

Extra

PDB:
ATOM 1 O3' A A 19 7.484 20.547 32.171 1.00 38.70 O
ATOM 2 P C A 20 7.904 20.948 30.670 1.00 41.91 P
ATOM 3 OP1 C A 20 7.980 19.707 29.853 1.00 43.16 O
ATOM 4 OP2 C A 20 9.077 21.855 30.728 1.00 42.92 O
ATOM 5 O5' C A 20 6.672 21.806 30.144 1.00 41.70 O
ATOM 6 C5' C A 20 5.361 21.254 30.091 1.00 41.55 C
ATOM 7 C4' C A 20 4.361 22.332 29.746 1.00 41.25 C
ATOM 8 O4' C A 20 4.241 23.239 30.875 1.00 41.32 O
ATOM 9 C3' C A 20 4.741 23.256 28.598 1.00 41.31 C
ATOM 10 O3' C A 20 4.444 22.705 27.326 1.00 41.22 O
ATOM 11 C2' C A 20 3.864 24.463 28.878 1.00 42.10 C
ATOM 12 O2' C A 20 2.527 24.284 28.443 1.00 41.78 O
ATOM 13 C1' C A 20 3.973 24.552 30.402 1.00 41.68 C
ATOM 14 N1 C A 20 5.069 25.442 30.822 1.00 41.29 N
ATOM 15 C2 C A 20 4.821 26.812 30.886 1.00 41.23 C
ATOM 16 O2 C A 20 3.685 27.222 30.615 1.00 43.05 O
ATOM 17 N3 C A 20 5.819 27.653 31.239 1.00 39.12 N
ATOM 18 C4 C A 20 7.029 27.168 31.526 1.00 39.57 C
ATOM 19 N4 C A 20 7.987 28.036 31.862 1.00 37.16 N
ATOM 20 C5 C A 20 7.311 25.770 31.481 1.00 38.92 C
ATOM 21 C6 C A 20 6.309 24.950 31.129 1.00 41.21 C
ATOM 22 P C A 21 5.416 23.013 26.081 1.00 42.26 P
ATOM 23 OP1 C A 21 4.824 22.357 24.887 1.00 43.70 O
ATOM 24 OP2 C A 21 6.810 22.687 26.482 1.00 41.55 O
ATOM 25 O5' C A 21 5.315 24.592 25.885 1.00 42.70 O
TER

ATOM 1 O3' U B 5 15.329 33.369 31.541 1.00 25.18 O
ATOM 2 P C B 6 14.772 33.651 33.024 1.00 26.72 P
ATOM 3 OP1 C B 6 14.554 35.114 33.154 1.00 28.69 O
ATOM 4 OP2 C B 6 15.666 32.961 33.981 1.00 25.36 O
ATOM 5 O5' C B 6 13.340 32.948 33.035 1.00 25.55 O
ATOM 6 C5' C B 6 12.238 33.519 32.330 1.00 27.45 C
ATOM 7 C4' C B 6 11.111 32.511 32.182 1.00 28.18 C
ATOM 8 O4' C B 6 11.630 31.290 31.592 1.00 29.26 O
ATOM 9 C3' C B 6 10.427 32.051 33.463 1.00 29.54 C
ATOM 10 O3' C B 6 9.334 32.893 33.797 1.00 31.58 O
ATOM 11 C2' C B 6 9.850 30.702 33.046 1.00 28.49 C
ATOM 12 O2' C B 6 8.639 30.813 32.332 1.00 28.96 O
ATOM 13 C1' C B 6 10.929 30.173 32.111 1.00 27.97 C
ATOM 14 N1 C B 6 11.875 29.287 32.796 1.00 26.72 N
ATOM 15 C2 C B 6 11.605 27.923 32.818 1.00 27.66 C
ATOM 16 O2 C B 6 10.580 27.513 32.265 1.00 29.28 O
ATOM 17 N3 C B 6 12.462 27.084 33.436 1.00 26.62 N
ATOM 18 C4 C B 6 13.557 27.562 34.013 1.00 26.23 C
ATOM 19 N4 C B 6 14.390 26.691 34.586 1.00 26.63 N
ATOM 20 C5 C B 6 13.856 28.957 34.021 1.00 27.27 C
ATOM 21 C6 C B 6 12.994 29.777 33.403 1.00 25.59 C
ATOM 22 P A B 7 9.506 34.060 34.886 1.00 32.26 P
ATOM 23 OP1 A B 7 8.246 34.135 35.656 1.00 31.92 O
ATOM 24 OP2 A B 7 10.015 35.270 34.178 1.00 36.92 O
ATOM 25 O5' A B 7 10.636 33.596 35.889 1.00 31.27 O
TER

Atoms:
C2: (4.821,26.812,30.886)
OP1: (7.980,19.707,29.853)
OP2: (9.077,21.855,30.728)
C4: (7.029,27.168,31.526)
O5': (6.672,21.806,30.144)
C3': (4.741,23.256,28.598)
C1': (3.973,24.552,30.402)
O4': (4.241,23.239,30.875)
C5': (5.361,21.254,30.091)
P: (7.904,20.948,30.670)
O2: (3.685,27.222,30.615)
C4': (4.361,22.332,29.746)
C2': (3.864,24.463,28.878)
O2': (2.527,24.284,28.443)
N1: (5.069,25.442,30.822)
N3: (5.819,27.653,31.239)
N4: (7.987,28.036,31.862)
C6: (6.309,24.950,31.129)
C5: (7.311,25.770,31.481)
O3': (4.444,22.705,27.326)
C2: (11.605,27.923,32.818)
OP1: (14.554,35.114,33.154)
OP2: (15.666,32.961,33.981)
C4: (13.557,27.562,34.013)
O5': (13.340,32.948,33.035)
C3': (10.427,32.051,33.463)
C1': (10.929,30.173,32.111)
O4': (11.630,31.290,31.592)
C5': (12.238,33.519,32.330)
P: (14.772,33.651,33.024)
O2: (10.580,27.513,32.265)
C4': (11.111,32.511,32.182)
C2': (9.850,30.702,33.046)
O2': (8.639,30.813,32.332)
N1: (11.875,29.287,32.796)
N3: (12.462,27.084,33.436)
N4: (14.390,26.691,34.586)
C6: (12.994,29.777,33.403)
C5: (13.856,28.957,34.021)
O3': (9.334,32.893,33.797)
Image (generated by PyMOL):
PyMOL image
show in jmol