ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUR:R9:R86

Extra

PDB:
ATOM 1 O3' A A 8 -7.217 5.552 24.837 1.00 94.96 O
ATOM 2 P C A 9 -5.913 4.624 24.860 1.00 94.19 P
ATOM 3 OP1 C A 9 -4.794 5.443 25.379 1.00 96.99 O
ATOM 4 OP2 C A 9 -5.805 3.982 23.533 1.00 89.97 O
ATOM 5 O5' C A 9 -6.256 3.487 25.938 1.00 97.56 O
ATOM 6 C5' C A 9 -6.162 3.730 27.344 1.00102.45 C
ATOM 7 C4' C A 9 -6.378 2.446 28.126 1.00104.59 C
ATOM 8 O4' C A 9 -7.650 1.856 27.764 1.00103.76 O
ATOM 9 C3' C A 9 -5.364 1.351 27.838 1.00103.30 C
ATOM 10 O3' C A 9 -4.230 1.524 28.665 1.00105.72 O
ATOM 11 C2' C A 9 -6.123 0.070 28.172 1.00104.40 C
ATOM 12 O2' C A 9 -6.050 -0.281 29.544 1.00109.42 O
ATOM 13 C1' C A 9 -7.557 0.439 27.786 1.00102.86 C
ATOM 14 N1 C A 9 -8.006 -0.113 26.456 1.00 98.22 N
ATOM 15 C2 C A 9 -8.271 -1.490 26.291 1.00 97.44 C
ATOM 16 O2 C A 9 -8.135 -2.276 27.239 1.00100.19 O
ATOM 17 N3 C A 9 -8.678 -1.937 25.070 1.00 93.55 N
ATOM 18 C4 C A 9 -8.824 -1.085 24.049 1.00 89.78 C
ATOM 19 N4 C A 9 -9.226 -1.576 22.876 1.00 86.05 N
ATOM 20 C5 C A 9 -8.561 0.310 24.192 1.00 91.24 C
ATOM 21 C6 C A 9 -8.162 0.743 25.396 1.00 95.20 C
ATOM 22 P A A 10 -2.779 1.373 28.021 1.00103.87 P
ATOM 23 OP1 A A 10 -1.782 1.692 29.072 1.00108.08 O
ATOM 24 OP2 A A 10 -2.769 2.134 26.750 1.00 99.85 O
ATOM 25 O5' A A 10 -2.722 -0.189 27.663 1.00101.08 O
TER

ATOM 1 O3' U B 85 -10.078 -10.555 20.374 1.00 61.83 O
ATOM 2 P C B 86 -11.062 -10.554 21.639 1.00 67.23 P
ATOM 3 OP1 C B 86 -10.630 -11.616 22.579 1.00 70.03 O
ATOM 4 OP2 C B 86 -12.467 -10.539 21.170 1.00 65.71 O
ATOM 5 O5' C B 86 -10.735 -9.125 22.277 1.00 67.31 O
ATOM 6 C5' C B 86 -9.431 -8.803 22.759 1.00 67.55 C
ATOM 7 C4' C B 86 -9.376 -7.339 23.151 1.00 68.85 C
ATOM 8 O4' C B 86 -9.476 -6.518 21.962 1.00 67.72 O
ATOM 9 C3' C B 86 -10.546 -6.872 23.999 1.00 71.32 C
ATOM 10 O3' C B 86 -10.293 -7.113 25.359 1.00 73.39 O
ATOM 11 C2' C B 86 -10.613 -5.381 23.695 1.00 72.15 C
ATOM 12 O2' C B 86 -9.673 -4.621 24.433 1.00 77.09 O
ATOM 13 C1' C B 86 -10.273 -5.371 22.214 1.00 67.59 C
ATOM 14 N1 C B 86 -11.479 -5.345 21.311 1.00 65.65 N
ATOM 15 C2 C B 86 -12.094 -4.118 21.005 1.00 66.12 C
ATOM 16 O2 C B 86 -11.650 -3.065 21.483 1.00 67.38 O
ATOM 17 N3 C B 86 -13.175 -4.115 20.177 1.00 64.61 N
ATOM 18 C4 C B 86 -13.642 -5.259 19.669 1.00 61.98 C
ATOM 19 N4 C B 86 -14.705 -5.195 18.866 1.00 60.38 N
ATOM 20 C5 C B 86 -13.037 -6.516 19.965 1.00 62.21 C
ATOM 21 C6 C B 86 -11.975 -6.506 20.779 1.00 63.98 C
ATOM 22 P G B 87 -11.362 -7.933 26.212 1.00 76.04 P
ATOM 23 OP1 G B 87 -10.584 -8.855 27.068 1.00 78.85 O
ATOM 24 OP2 G B 87 -12.397 -8.473 25.300 1.00 73.56 O
ATOM 25 O5' G B 87 -12.084 -6.842 27.138 1.00 79.36 O
TER

Atoms:
C2: (-8.271,-1.490,26.291)
OP1: (-4.794,5.443,25.379)
OP2: (-5.805,3.982,23.533)
C4: (-8.824,-1.085,24.049)
O5': (-6.256,3.487,25.938)
C3': (-5.364,1.351,27.838)
C1': (-7.557,0.439,27.786)
O4': (-7.650,1.856,27.764)
C5': (-6.162,3.730,27.344)
P: (-5.913,4.624,24.860)
O2: (-8.135,-2.276,27.239)
C4': (-6.378,2.446,28.126)
C2': (-6.123,0.070,28.172)
O2': (-6.050,-0.281,29.544)
N1: (-8.006,-0.113,26.456)
N3: (-8.678,-1.937,25.070)
N4: (-9.226,-1.576,22.876)
C6: (-8.162,0.743,25.396)
C5: (-8.561,0.310,24.192)
O3': (-4.230,1.524,28.665)
C2: (-12.094,-4.118,21.005)
OP1: (-10.630,-11.616,22.579)
OP2: (-12.467,-10.539,21.170)
C4: (-13.642,-5.259,19.669)
O5': (-10.735,-9.125,22.277)
C3': (-10.546,-6.872,23.999)
C1': (-10.273,-5.371,22.214)
O4': (-9.476,-6.518,21.962)
C5': (-9.431,-8.803,22.759)
P: (-11.062,-10.554,21.639)
O2: (-11.650,-3.065,21.483)
C4': (-9.376,-7.339,23.151)
C2': (-10.613,-5.381,23.695)
O2': (-9.673,-4.621,24.433)
N1: (-11.479,-5.345,21.311)
N3: (-13.175,-4.115,20.177)
N4: (-14.705,-5.195,18.866)
C6: (-11.975,-6.506,20.779)
C5: (-13.037,-6.516,19.965)
O3': (-10.293,-7.113,25.359)
Image (generated by PyMOL):
PyMOL image
show in jmol