Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C9:C24
Extra
PDB:
ATOM 1 O3' A A 8 31.173 -4.971 16.979 1.00 57.93 O
ATOM 2 P C A 9 32.729 -4.803 16.547 1.00 62.85 P
ATOM 3 OP1 C A 9 33.452 -3.723 17.275 1.00 65.51 O
ATOM 4 OP2 C A 9 32.681 -4.763 15.063 1.00 63.34 O
ATOM 5 O5' C A 9 33.420 -6.186 16.965 1.00 64.65 O
ATOM 6 C5' C A 9 34.427 -6.769 16.127 1.00 69.50 C
ATOM 7 C4' C A 9 35.489 -7.493 16.941 1.00 72.18 C
ATOM 8 O4' C A 9 36.021 -6.614 17.973 1.00 73.84 O
ATOM 9 C3' C A 9 35.067 -8.731 17.716 1.00 73.65 C
ATOM 10 O3' C A 9 35.007 -9.881 16.881 1.00 75.28 O
ATOM 11 C2' C A 9 36.198 -8.862 18.732 1.00 73.79 C
ATOM 12 O2' C A 9 37.371 -9.445 18.193 1.00 72.26 O
ATOM 13 C1' C A 9 36.461 -7.396 19.079 1.00 74.72 C
ATOM 14 N1 C A 9 35.732 -6.970 20.289 1.00 75.56 N
ATOM 15 C2 C A 9 36.105 -7.517 21.531 1.00 75.73 C
ATOM 16 O2 C A 9 37.044 -8.333 21.574 1.00 75.58 O
ATOM 17 N3 C A 9 35.435 -7.145 22.647 1.00 75.37 N
ATOM 18 C4 C A 9 34.431 -6.266 22.560 1.00 75.11 C
ATOM 19 N4 C A 9 33.790 -5.934 23.686 1.00 73.99 N
ATOM 20 C5 C A 9 34.035 -5.690 21.312 1.00 75.44 C
ATOM 21 C6 C A 9 34.707 -6.066 20.214 1.00 75.05 C
ATOM 22 P C A 10 33.935 -11.039 17.200 1.00 75.79 P
ATOM 23 OP1 C A 10 34.281 -12.214 16.358 1.00 76.76 O
ATOM 24 OP2 C A 10 32.577 -10.440 17.104 1.00 75.97 O
ATOM 25 O5' C A 10 34.219 -11.440 18.719 1.00 75.56 O
TER
ATOM 1 O3' C B 23 32.025 -10.427 29.099 1.00 30.36 O
ATOM 2 P A B 24 32.848 -9.494 30.133 1.00 30.19 P
ATOM 3 OP1 A B 24 34.045 -10.272 30.546 1.00 31.86 O
ATOM 4 OP2 A B 24 31.927 -8.953 31.166 1.00 27.11 O
ATOM 5 O5' A B 24 33.358 -8.270 29.251 1.00 29.94 O
ATOM 6 C5' A B 24 34.156 -8.478 28.094 1.00 25.83 C
ATOM 7 C4' A B 24 34.396 -7.162 27.407 1.00 27.18 C
ATOM 8 O4' A B 24 33.146 -6.637 26.895 1.00 26.82 O
ATOM 9 C3' A B 24 34.868 -6.067 28.340 1.00 28.54 C
ATOM 10 O3' A B 24 36.259 -6.145 28.541 1.00 33.15 O
ATOM 11 C2' A B 24 34.506 -4.808 27.574 1.00 28.13 C
ATOM 12 O2' A B 24 35.444 -4.506 26.558 1.00 30.89 O
ATOM 13 C1' A B 24 33.170 -5.212 26.953 1.00 25.80 C
ATOM 14 N9 A B 24 32.009 -4.739 27.716 1.00 23.25 N
ATOM 15 C8 A B 24 31.189 -5.460 28.554 1.00 22.08 C
ATOM 16 N7 A B 24 30.203 -4.761 29.063 1.00 21.87 N
ATOM 17 C5 A B 24 30.387 -3.487 28.537 1.00 20.89 C
ATOM 18 C6 A B 24 29.662 -2.281 28.685 1.00 19.19 C
ATOM 19 N6 A B 24 28.553 -2.164 29.428 1.00 19.22 N
ATOM 20 N1 A B 24 30.119 -1.191 28.030 1.00 21.07 N
ATOM 21 C2 A B 24 31.225 -1.310 27.274 1.00 21.82 C
ATOM 22 N3 A B 24 31.985 -2.385 27.048 1.00 22.34 N
ATOM 23 C4 A B 24 31.506 -3.454 27.716 1.00 23.10 C
ATOM 24 P G B 25 36.858 -5.799 29.981 1.00 37.92 P
ATOM 25 OP1 G B 25 38.218 -6.397 30.024 1.00 39.71 O
ATOM 26 OP2 G B 25 35.847 -6.181 31.000 1.00 37.82 O
ATOM 27 O5' G B 25 36.968 -4.210 30.007 1.00 38.44 O
TER
ATOM 2 P C A 9 32.729 -4.803 16.547 1.00 62.85 P
ATOM 3 OP1 C A 9 33.452 -3.723 17.275 1.00 65.51 O
ATOM 4 OP2 C A 9 32.681 -4.763 15.063 1.00 63.34 O
ATOM 5 O5' C A 9 33.420 -6.186 16.965 1.00 64.65 O
ATOM 6 C5' C A 9 34.427 -6.769 16.127 1.00 69.50 C
ATOM 7 C4' C A 9 35.489 -7.493 16.941 1.00 72.18 C
ATOM 8 O4' C A 9 36.021 -6.614 17.973 1.00 73.84 O
ATOM 9 C3' C A 9 35.067 -8.731 17.716 1.00 73.65 C
ATOM 10 O3' C A 9 35.007 -9.881 16.881 1.00 75.28 O
ATOM 11 C2' C A 9 36.198 -8.862 18.732 1.00 73.79 C
ATOM 12 O2' C A 9 37.371 -9.445 18.193 1.00 72.26 O
ATOM 13 C1' C A 9 36.461 -7.396 19.079 1.00 74.72 C
ATOM 14 N1 C A 9 35.732 -6.970 20.289 1.00 75.56 N
ATOM 15 C2 C A 9 36.105 -7.517 21.531 1.00 75.73 C
ATOM 16 O2 C A 9 37.044 -8.333 21.574 1.00 75.58 O
ATOM 17 N3 C A 9 35.435 -7.145 22.647 1.00 75.37 N
ATOM 18 C4 C A 9 34.431 -6.266 22.560 1.00 75.11 C
ATOM 19 N4 C A 9 33.790 -5.934 23.686 1.00 73.99 N
ATOM 20 C5 C A 9 34.035 -5.690 21.312 1.00 75.44 C
ATOM 21 C6 C A 9 34.707 -6.066 20.214 1.00 75.05 C
ATOM 22 P C A 10 33.935 -11.039 17.200 1.00 75.79 P
ATOM 23 OP1 C A 10 34.281 -12.214 16.358 1.00 76.76 O
ATOM 24 OP2 C A 10 32.577 -10.440 17.104 1.00 75.97 O
ATOM 25 O5' C A 10 34.219 -11.440 18.719 1.00 75.56 O
TER
ATOM 1 O3' C B 23 32.025 -10.427 29.099 1.00 30.36 O
ATOM 2 P A B 24 32.848 -9.494 30.133 1.00 30.19 P
ATOM 3 OP1 A B 24 34.045 -10.272 30.546 1.00 31.86 O
ATOM 4 OP2 A B 24 31.927 -8.953 31.166 1.00 27.11 O
ATOM 5 O5' A B 24 33.358 -8.270 29.251 1.00 29.94 O
ATOM 6 C5' A B 24 34.156 -8.478 28.094 1.00 25.83 C
ATOM 7 C4' A B 24 34.396 -7.162 27.407 1.00 27.18 C
ATOM 8 O4' A B 24 33.146 -6.637 26.895 1.00 26.82 O
ATOM 9 C3' A B 24 34.868 -6.067 28.340 1.00 28.54 C
ATOM 10 O3' A B 24 36.259 -6.145 28.541 1.00 33.15 O
ATOM 11 C2' A B 24 34.506 -4.808 27.574 1.00 28.13 C
ATOM 12 O2' A B 24 35.444 -4.506 26.558 1.00 30.89 O
ATOM 13 C1' A B 24 33.170 -5.212 26.953 1.00 25.80 C
ATOM 14 N9 A B 24 32.009 -4.739 27.716 1.00 23.25 N
ATOM 15 C8 A B 24 31.189 -5.460 28.554 1.00 22.08 C
ATOM 16 N7 A B 24 30.203 -4.761 29.063 1.00 21.87 N
ATOM 17 C5 A B 24 30.387 -3.487 28.537 1.00 20.89 C
ATOM 18 C6 A B 24 29.662 -2.281 28.685 1.00 19.19 C
ATOM 19 N6 A B 24 28.553 -2.164 29.428 1.00 19.22 N
ATOM 20 N1 A B 24 30.119 -1.191 28.030 1.00 21.07 N
ATOM 21 C2 A B 24 31.225 -1.310 27.274 1.00 21.82 C
ATOM 22 N3 A B 24 31.985 -2.385 27.048 1.00 22.34 N
ATOM 23 C4 A B 24 31.506 -3.454 27.716 1.00 23.10 C
ATOM 24 P G B 25 36.858 -5.799 29.981 1.00 37.92 P
ATOM 25 OP1 G B 25 38.218 -6.397 30.024 1.00 39.71 O
ATOM 26 OP2 G B 25 35.847 -6.181 31.000 1.00 37.82 O
ATOM 27 O5' G B 25 36.968 -4.210 30.007 1.00 38.44 O
TER
Atoms:
C2: (36.105,-7.517,21.531)
OP1: (33.452,-3.723,17.275)
OP2: (32.681,-4.763,15.063)
C4: (34.431,-6.266,22.560)
O5': (33.420,-6.186,16.965)
C3': (35.067,-8.731,17.716)
C1': (36.461,-7.396,19.079)
O4': (36.021,-6.614,17.973)
C5': (34.427,-6.769,16.127)
P: (32.729,-4.803,16.547)
O2: (37.044,-8.333,21.574)
C4': (35.489,-7.493,16.941)
C2': (36.198,-8.862,18.732)
O2': (37.371,-9.445,18.193)
N1: (35.732,-6.970,20.289)
N3: (35.435,-7.145,22.647)
N4: (33.790,-5.934,23.686)
C6: (34.707,-6.066,20.214)
C5: (34.035,-5.690,21.312)
O3': (35.007,-9.881,16.881)
OP1: (33.452,-3.723,17.275)
OP2: (32.681,-4.763,15.063)
C4: (34.431,-6.266,22.560)
O5': (33.420,-6.186,16.965)
C3': (35.067,-8.731,17.716)
C1': (36.461,-7.396,19.079)
O4': (36.021,-6.614,17.973)
C5': (34.427,-6.769,16.127)
P: (32.729,-4.803,16.547)
O2: (37.044,-8.333,21.574)
C4': (35.489,-7.493,16.941)
C2': (36.198,-8.862,18.732)
O2': (37.371,-9.445,18.193)
N1: (35.732,-6.970,20.289)
N3: (35.435,-7.145,22.647)
N4: (33.790,-5.934,23.686)
C6: (34.707,-6.066,20.214)
C5: (34.035,-5.690,21.312)
O3': (35.007,-9.881,16.881)
OP1: (34.045,-10.272,30.546)
OP2: (31.927,-8.953,31.166)
C3': (34.868,-6.067,28.340)
C1': (33.170,-5.212,26.953)
C5': (34.156,-8.478,28.094)
O4': (33.146,-6.637,26.895)
C8: (31.189,-5.460,28.554)
O2': (35.444,-4.506,26.558)
C6: (29.662,-2.281,28.685)
C5: (30.387,-3.487,28.537)
C4: (31.506,-3.454,27.716)
P: (32.848,-9.494,30.133)
C4': (34.396,-7.162,27.407)
C2': (34.506,-4.808,27.574)
C2: (31.225,-1.310,27.274)
N1: (30.119,-1.191,28.030)
N3: (31.985,-2.385,27.048)
N6: (28.553,-2.164,29.428)
N7: (30.203,-4.761,29.063)
N9: (32.009,-4.739,27.716)
O5': (33.358,-8.270,29.251)
O3': (36.259,-6.145,28.541)
OP2: (31.927,-8.953,31.166)
C3': (34.868,-6.067,28.340)
C1': (33.170,-5.212,26.953)
C5': (34.156,-8.478,28.094)
O4': (33.146,-6.637,26.895)
C8: (31.189,-5.460,28.554)
O2': (35.444,-4.506,26.558)
C6: (29.662,-2.281,28.685)
C5: (30.387,-3.487,28.537)
C4: (31.506,-3.454,27.716)
P: (32.848,-9.494,30.133)
C4': (34.396,-7.162,27.407)
C2': (34.506,-4.808,27.574)
C2: (31.225,-1.310,27.274)
N1: (30.119,-1.191,28.030)
N3: (31.985,-2.385,27.048)
N6: (28.553,-2.164,29.428)
N7: (30.203,-4.761,29.063)
N9: (32.009,-4.739,27.716)
O5': (33.358,-8.270,29.251)
O3': (36.259,-6.145,28.541)
Image (generated by PyMOL):