Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02333:01016
Extra
PDB:
ATOM 1 O3' G A2332 54.706 103.637 113.486 1.00 41.53 O
ATOM 2 P U A2333 55.225 103.564 115.009 1.00 41.84 P
ATOM 3 OP1 U A2333 54.221 102.756 115.758 1.00 39.92 O
ATOM 4 OP2 U A2333 55.553 104.939 115.474 1.00 40.57 O
ATOM 5 O5' U A2333 56.574 102.728 114.881 1.00 39.39 O
ATOM 6 C5' U A2333 56.554 101.413 114.309 1.00 40.19 C
ATOM 7 C4' U A2333 57.954 100.894 114.126 1.00 41.02 C
ATOM 8 O4' U A2333 58.664 101.715 113.172 1.00 42.21 O
ATOM 9 C3' U A2333 58.837 100.898 115.355 1.00 40.31 C
ATOM 10 O3' U A2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 11 C2' U A2333 60.230 100.864 114.737 1.00 39.57 C
ATOM 12 O2' U A2333 60.568 99.573 114.274 1.00 37.42 O
ATOM 13 C1' U A2333 60.036 101.746 113.502 1.00 40.35 C
ATOM 14 N1 U A2333 60.441 103.155 113.614 1.00 42.80 N
ATOM 15 C2 U A2333 61.770 103.479 113.380 1.00 44.10 C
ATOM 16 O2 U A2333 62.635 102.646 113.166 1.00 45.38 O
ATOM 17 N3 U A2333 62.050 104.822 113.407 1.00 43.90 N
ATOM 18 C4 U A2333 61.166 105.852 113.650 1.00 44.24 C
ATOM 19 O4 U A2333 61.542 107.015 113.496 1.00 45.94 O
ATOM 20 C5 U A2333 59.826 105.434 113.933 1.00 43.66 C
ATOM 21 C6 U A2333 59.518 104.136 113.908 1.00 43.00 C
ATOM 22 P C A2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 23 OP1 C A2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 24 OP2 C A2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 25 O5' C A2334 59.991 100.063 118.158 1.00 43.76 O
TER
ATOM 1 O3' U B1015 62.613 91.683 115.799 1.00 41.19 O
ATOM 2 P A B1016 61.706 91.441 114.502 1.00 40.04 P
ATOM 3 OP1 A B1016 60.720 90.383 114.825 1.00 41.04 O
ATOM 4 OP2 A B1016 62.647 91.258 113.380 1.00 40.96 O
ATOM 5 O5' A B1016 60.913 92.803 114.267 1.00 39.46 O
ATOM 6 C5' A B1016 59.897 93.227 115.193 1.00 40.08 C
ATOM 7 C4' A B1016 59.655 94.716 115.080 1.00 39.29 C
ATOM 8 O4' A B1016 60.928 95.400 115.057 1.00 40.34 O
ATOM 9 C3' A B1016 58.921 95.214 113.846 1.00 38.27 C
ATOM 10 O3' A B1016 57.518 95.144 114.110 1.00 40.71 O
ATOM 11 C2' A B1016 59.395 96.659 113.765 1.00 38.19 C
ATOM 12 O2' A B1016 58.760 97.464 114.735 1.00 35.91 O
ATOM 13 C1' A B1016 60.854 96.524 114.204 1.00 38.73 C
ATOM 14 N9 A B1016 61.833 96.331 113.134 1.00 37.37 N
ATOM 15 C8 A B1016 62.252 95.139 112.595 1.00 36.63 C
ATOM 16 N7 A B1016 63.179 95.271 111.681 1.00 35.91 N
ATOM 17 C5 A B1016 63.380 96.640 111.606 1.00 34.80 C
ATOM 18 C6 A B1016 64.241 97.424 110.826 1.00 33.69 C
ATOM 19 N6 A B1016 65.107 96.920 109.941 1.00 32.71 N
ATOM 20 N1 A B1016 64.187 98.759 110.987 1.00 33.18 N
ATOM 21 C2 A B1016 63.329 99.260 111.876 1.00 35.09 C
ATOM 22 N3 A B1016 62.474 98.628 112.673 1.00 35.17 N
ATOM 23 C4 A B1016 62.548 97.305 112.486 1.00 35.51 C
ATOM 24 P A B1017 56.469 94.884 112.918 1.00 40.26 P
ATOM 25 OP1 A B1017 55.137 94.741 113.558 1.00 37.86 O
ATOM 26 OP2 A B1017 56.972 93.802 112.027 1.00 38.42 O
ATOM 27 O5' A B1017 56.485 96.254 112.108 1.00 39.86 O
TER
ATOM 2 P U A2333 55.225 103.564 115.009 1.00 41.84 P
ATOM 3 OP1 U A2333 54.221 102.756 115.758 1.00 39.92 O
ATOM 4 OP2 U A2333 55.553 104.939 115.474 1.00 40.57 O
ATOM 5 O5' U A2333 56.574 102.728 114.881 1.00 39.39 O
ATOM 6 C5' U A2333 56.554 101.413 114.309 1.00 40.19 C
ATOM 7 C4' U A2333 57.954 100.894 114.126 1.00 41.02 C
ATOM 8 O4' U A2333 58.664 101.715 113.172 1.00 42.21 O
ATOM 9 C3' U A2333 58.837 100.898 115.355 1.00 40.31 C
ATOM 10 O3' U A2333 58.551 99.732 116.123 1.00 43.28 O
ATOM 11 C2' U A2333 60.230 100.864 114.737 1.00 39.57 C
ATOM 12 O2' U A2333 60.568 99.573 114.274 1.00 37.42 O
ATOM 13 C1' U A2333 60.036 101.746 113.502 1.00 40.35 C
ATOM 14 N1 U A2333 60.441 103.155 113.614 1.00 42.80 N
ATOM 15 C2 U A2333 61.770 103.479 113.380 1.00 44.10 C
ATOM 16 O2 U A2333 62.635 102.646 113.166 1.00 45.38 O
ATOM 17 N3 U A2333 62.050 104.822 113.407 1.00 43.90 N
ATOM 18 C4 U A2333 61.166 105.852 113.650 1.00 44.24 C
ATOM 19 O4 U A2333 61.542 107.015 113.496 1.00 45.94 O
ATOM 20 C5 U A2333 59.826 105.434 113.933 1.00 43.66 C
ATOM 21 C6 U A2333 59.518 104.136 113.908 1.00 43.00 C
ATOM 22 P C A2334 58.478 99.818 117.727 1.00 44.37 P
ATOM 23 OP1 C A2334 58.058 98.477 118.211 1.00 42.89 O
ATOM 24 OP2 C A2334 57.693 101.011 118.110 1.00 44.20 O
ATOM 25 O5' C A2334 59.991 100.063 118.158 1.00 43.76 O
TER
ATOM 1 O3' U B1015 62.613 91.683 115.799 1.00 41.19 O
ATOM 2 P A B1016 61.706 91.441 114.502 1.00 40.04 P
ATOM 3 OP1 A B1016 60.720 90.383 114.825 1.00 41.04 O
ATOM 4 OP2 A B1016 62.647 91.258 113.380 1.00 40.96 O
ATOM 5 O5' A B1016 60.913 92.803 114.267 1.00 39.46 O
ATOM 6 C5' A B1016 59.897 93.227 115.193 1.00 40.08 C
ATOM 7 C4' A B1016 59.655 94.716 115.080 1.00 39.29 C
ATOM 8 O4' A B1016 60.928 95.400 115.057 1.00 40.34 O
ATOM 9 C3' A B1016 58.921 95.214 113.846 1.00 38.27 C
ATOM 10 O3' A B1016 57.518 95.144 114.110 1.00 40.71 O
ATOM 11 C2' A B1016 59.395 96.659 113.765 1.00 38.19 C
ATOM 12 O2' A B1016 58.760 97.464 114.735 1.00 35.91 O
ATOM 13 C1' A B1016 60.854 96.524 114.204 1.00 38.73 C
ATOM 14 N9 A B1016 61.833 96.331 113.134 1.00 37.37 N
ATOM 15 C8 A B1016 62.252 95.139 112.595 1.00 36.63 C
ATOM 16 N7 A B1016 63.179 95.271 111.681 1.00 35.91 N
ATOM 17 C5 A B1016 63.380 96.640 111.606 1.00 34.80 C
ATOM 18 C6 A B1016 64.241 97.424 110.826 1.00 33.69 C
ATOM 19 N6 A B1016 65.107 96.920 109.941 1.00 32.71 N
ATOM 20 N1 A B1016 64.187 98.759 110.987 1.00 33.18 N
ATOM 21 C2 A B1016 63.329 99.260 111.876 1.00 35.09 C
ATOM 22 N3 A B1016 62.474 98.628 112.673 1.00 35.17 N
ATOM 23 C4 A B1016 62.548 97.305 112.486 1.00 35.51 C
ATOM 24 P A B1017 56.469 94.884 112.918 1.00 40.26 P
ATOM 25 OP1 A B1017 55.137 94.741 113.558 1.00 37.86 O
ATOM 26 OP2 A B1017 56.972 93.802 112.027 1.00 38.42 O
ATOM 27 O5' A B1017 56.485 96.254 112.108 1.00 39.86 O
TER
Atoms:
C4: (61.166,105.852,113.650)
N3: (62.050,104.822,113.407)
OP1: (54.221,102.756,115.758)
OP2: (55.553,104.939,115.474)
C2: (61.770,103.479,113.380)
C1': (60.036,101.746,113.502)
C3': (58.837,100.898,115.355)
O5': (56.574,102.728,114.881)
O4': (58.664,101.715,113.172)
C5': (56.554,101.413,114.309)
P: (55.225,103.564,115.009)
C4': (57.954,100.894,114.126)
C2': (60.230,100.864,114.737)
O2': (60.568,99.573,114.274)
N1: (60.441,103.155,113.614)
O4: (61.542,107.015,113.496)
O2: (62.635,102.646,113.166)
C6: (59.518,104.136,113.908)
C5: (59.826,105.434,113.933)
O3': (58.551,99.732,116.123)
N3: (62.050,104.822,113.407)
OP1: (54.221,102.756,115.758)
OP2: (55.553,104.939,115.474)
C2: (61.770,103.479,113.380)
C1': (60.036,101.746,113.502)
C3': (58.837,100.898,115.355)
O5': (56.574,102.728,114.881)
O4': (58.664,101.715,113.172)
C5': (56.554,101.413,114.309)
P: (55.225,103.564,115.009)
C4': (57.954,100.894,114.126)
C2': (60.230,100.864,114.737)
O2': (60.568,99.573,114.274)
N1: (60.441,103.155,113.614)
O4: (61.542,107.015,113.496)
O2: (62.635,102.646,113.166)
C6: (59.518,104.136,113.908)
C5: (59.826,105.434,113.933)
O3': (58.551,99.732,116.123)
OP1: (60.720,90.383,114.825)
OP2: (62.647,91.258,113.380)
C3': (58.921,95.214,113.846)
C1': (60.854,96.524,114.204)
C5': (59.897,93.227,115.193)
O4': (60.928,95.400,115.057)
C8: (62.252,95.139,112.595)
O2': (58.760,97.464,114.735)
C6: (64.241,97.424,110.826)
C5: (63.380,96.640,111.606)
C4: (62.548,97.305,112.486)
P: (61.706,91.441,114.502)
C4': (59.655,94.716,115.080)
C2': (59.395,96.659,113.765)
C2: (63.329,99.260,111.876)
N1: (64.187,98.759,110.987)
N3: (62.474,98.628,112.673)
N6: (65.107,96.920,109.941)
N7: (63.179,95.271,111.681)
N9: (61.833,96.331,113.134)
O5': (60.913,92.803,114.267)
O3': (57.518,95.144,114.110)
OP2: (62.647,91.258,113.380)
C3': (58.921,95.214,113.846)
C1': (60.854,96.524,114.204)
C5': (59.897,93.227,115.193)
O4': (60.928,95.400,115.057)
C8: (62.252,95.139,112.595)
O2': (58.760,97.464,114.735)
C6: (64.241,97.424,110.826)
C5: (63.380,96.640,111.606)
C4: (62.548,97.305,112.486)
P: (61.706,91.441,114.502)
C4': (59.655,94.716,115.080)
C2': (59.395,96.659,113.765)
C2: (63.329,99.260,111.876)
N1: (64.187,98.759,110.987)
N3: (62.474,98.628,112.673)
N6: (65.107,96.920,109.941)
N7: (63.179,95.271,111.681)
N9: (61.833,96.331,113.134)
O5': (60.913,92.803,114.267)
O3': (57.518,95.144,114.110)
Image (generated by PyMOL):