Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.447 88.969 97.811 1.00 36.12 O
ATOM 2 P U A1223 7.132 89.035 96.251 1.00 35.49 P
ATOM 3 OP1 U A1223 6.238 87.912 95.889 1.00 36.71 O
ATOM 4 OP2 U A1223 8.446 89.155 95.594 1.00 36.33 O
ATOM 5 O5' U A1223 6.317 90.394 96.113 1.00 32.84 O
ATOM 6 C5' U A1223 4.992 90.467 96.632 1.00 33.68 C
ATOM 7 C4' U A1223 4.476 91.876 96.600 1.00 34.15 C
ATOM 8 O4' U A1223 5.300 92.720 97.439 1.00 35.65 O
ATOM 9 C3' U A1223 4.498 92.598 95.271 1.00 34.20 C
ATOM 10 O3' U A1223 3.449 92.204 94.411 1.00 35.50 O
ATOM 11 C2' U A1223 4.342 94.041 95.720 1.00 35.17 C
ATOM 12 O2' U A1223 3.025 94.357 96.110 1.00 32.97 O
ATOM 13 C1' U A1223 5.243 94.054 96.953 1.00 36.33 C
ATOM 14 N1 U A1223 6.600 94.493 96.598 1.00 38.60 N
ATOM 15 C2 U A1223 6.845 95.851 96.601 1.00 39.56 C
ATOM 16 O2 U A1223 5.989 96.678 96.876 1.00 39.51 O
ATOM 17 N3 U A1223 8.123 96.209 96.259 1.00 39.99 N
ATOM 18 C4 U A1223 9.153 95.371 95.914 1.00 39.34 C
ATOM 19 O4 U A1223 10.249 95.850 95.633 1.00 41.40 O
ATOM 20 C5 U A1223 8.823 93.982 95.928 1.00 39.55 C
ATOM 21 C6 U A1223 7.591 93.599 96.264 1.00 38.51 C
ATOM 22 P G A1224 3.563 92.508 92.837 1.00 37.50 P
ATOM 23 OP1 G A1224 2.668 91.553 92.148 1.00 37.49 O
ATOM 24 OP2 G A1224 4.999 92.566 92.459 1.00 38.70 O
ATOM 25 O5' G A1224 2.952 93.970 92.686 1.00 35.90 O
TER
ATOM 1 O3' G B 552 -5.796 94.599 96.720 1.00 50.62 O
ATOM 2 P A B 553 -5.260 93.655 97.906 1.00 49.79 P
ATOM 3 OP1 A B 553 -5.848 92.315 97.698 1.00 48.94 O
ATOM 4 OP2 A B 553 -5.426 94.333 99.217 1.00 49.01 O
ATOM 5 O5' A B 553 -3.706 93.526 97.595 1.00 48.49 O
ATOM 6 C5' A B 553 -3.259 92.816 96.431 1.00 48.35 C
ATOM 7 C4' A B 553 -1.763 92.910 96.294 1.00 47.12 C
ATOM 8 O4' A B 553 -1.382 94.252 95.900 1.00 46.45 O
ATOM 9 C3' A B 553 -0.965 92.667 97.560 1.00 46.42 C
ATOM 10 O3' A B 553 -0.839 91.286 97.854 1.00 47.30 O
ATOM 11 C2' A B 553 0.362 93.325 97.219 1.00 45.63 C
ATOM 12 O2' A B 553 1.144 92.511 96.366 1.00 42.85 O
ATOM 13 C1' A B 553 -0.112 94.563 96.452 1.00 45.11 C
ATOM 14 N9 A B 553 -0.257 95.762 97.279 1.00 44.89 N
ATOM 15 C8 A B 553 -1.406 96.243 97.861 1.00 45.97 C
ATOM 16 N7 A B 553 -1.235 97.358 98.531 1.00 47.17 N
ATOM 17 C5 A B 553 0.121 97.630 98.385 1.00 47.33 C
ATOM 18 C6 A B 553 0.936 98.686 98.855 1.00 46.92 C
ATOM 19 N6 A B 553 0.485 99.699 99.596 1.00 48.38 N
ATOM 20 N1 A B 553 2.245 98.661 98.531 1.00 46.01 N
ATOM 21 C2 A B 553 2.697 97.644 97.786 1.00 47.05 C
ATOM 22 N3 A B 553 2.036 96.598 97.284 1.00 45.97 N
ATOM 23 C4 A B 553 0.737 96.651 97.622 1.00 46.24 C
ATOM 24 P A B 554 -1.082 90.771 99.358 1.00 49.80 P
ATOM 25 OP1 A B 554 -1.348 89.306 99.289 1.00 48.95 O
ATOM 26 OP2 A B 554 -2.067 91.673 100.017 1.00 49.84 O
ATOM 27 O5' A B 554 0.315 90.997 100.086 1.00 48.18 O
TER
ATOM 2 P U A1223 7.132 89.035 96.251 1.00 35.49 P
ATOM 3 OP1 U A1223 6.238 87.912 95.889 1.00 36.71 O
ATOM 4 OP2 U A1223 8.446 89.155 95.594 1.00 36.33 O
ATOM 5 O5' U A1223 6.317 90.394 96.113 1.00 32.84 O
ATOM 6 C5' U A1223 4.992 90.467 96.632 1.00 33.68 C
ATOM 7 C4' U A1223 4.476 91.876 96.600 1.00 34.15 C
ATOM 8 O4' U A1223 5.300 92.720 97.439 1.00 35.65 O
ATOM 9 C3' U A1223 4.498 92.598 95.271 1.00 34.20 C
ATOM 10 O3' U A1223 3.449 92.204 94.411 1.00 35.50 O
ATOM 11 C2' U A1223 4.342 94.041 95.720 1.00 35.17 C
ATOM 12 O2' U A1223 3.025 94.357 96.110 1.00 32.97 O
ATOM 13 C1' U A1223 5.243 94.054 96.953 1.00 36.33 C
ATOM 14 N1 U A1223 6.600 94.493 96.598 1.00 38.60 N
ATOM 15 C2 U A1223 6.845 95.851 96.601 1.00 39.56 C
ATOM 16 O2 U A1223 5.989 96.678 96.876 1.00 39.51 O
ATOM 17 N3 U A1223 8.123 96.209 96.259 1.00 39.99 N
ATOM 18 C4 U A1223 9.153 95.371 95.914 1.00 39.34 C
ATOM 19 O4 U A1223 10.249 95.850 95.633 1.00 41.40 O
ATOM 20 C5 U A1223 8.823 93.982 95.928 1.00 39.55 C
ATOM 21 C6 U A1223 7.591 93.599 96.264 1.00 38.51 C
ATOM 22 P G A1224 3.563 92.508 92.837 1.00 37.50 P
ATOM 23 OP1 G A1224 2.668 91.553 92.148 1.00 37.49 O
ATOM 24 OP2 G A1224 4.999 92.566 92.459 1.00 38.70 O
ATOM 25 O5' G A1224 2.952 93.970 92.686 1.00 35.90 O
TER
ATOM 1 O3' G B 552 -5.796 94.599 96.720 1.00 50.62 O
ATOM 2 P A B 553 -5.260 93.655 97.906 1.00 49.79 P
ATOM 3 OP1 A B 553 -5.848 92.315 97.698 1.00 48.94 O
ATOM 4 OP2 A B 553 -5.426 94.333 99.217 1.00 49.01 O
ATOM 5 O5' A B 553 -3.706 93.526 97.595 1.00 48.49 O
ATOM 6 C5' A B 553 -3.259 92.816 96.431 1.00 48.35 C
ATOM 7 C4' A B 553 -1.763 92.910 96.294 1.00 47.12 C
ATOM 8 O4' A B 553 -1.382 94.252 95.900 1.00 46.45 O
ATOM 9 C3' A B 553 -0.965 92.667 97.560 1.00 46.42 C
ATOM 10 O3' A B 553 -0.839 91.286 97.854 1.00 47.30 O
ATOM 11 C2' A B 553 0.362 93.325 97.219 1.00 45.63 C
ATOM 12 O2' A B 553 1.144 92.511 96.366 1.00 42.85 O
ATOM 13 C1' A B 553 -0.112 94.563 96.452 1.00 45.11 C
ATOM 14 N9 A B 553 -0.257 95.762 97.279 1.00 44.89 N
ATOM 15 C8 A B 553 -1.406 96.243 97.861 1.00 45.97 C
ATOM 16 N7 A B 553 -1.235 97.358 98.531 1.00 47.17 N
ATOM 17 C5 A B 553 0.121 97.630 98.385 1.00 47.33 C
ATOM 18 C6 A B 553 0.936 98.686 98.855 1.00 46.92 C
ATOM 19 N6 A B 553 0.485 99.699 99.596 1.00 48.38 N
ATOM 20 N1 A B 553 2.245 98.661 98.531 1.00 46.01 N
ATOM 21 C2 A B 553 2.697 97.644 97.786 1.00 47.05 C
ATOM 22 N3 A B 553 2.036 96.598 97.284 1.00 45.97 N
ATOM 23 C4 A B 553 0.737 96.651 97.622 1.00 46.24 C
ATOM 24 P A B 554 -1.082 90.771 99.358 1.00 49.80 P
ATOM 25 OP1 A B 554 -1.348 89.306 99.289 1.00 48.95 O
ATOM 26 OP2 A B 554 -2.067 91.673 100.017 1.00 49.84 O
ATOM 27 O5' A B 554 0.315 90.997 100.086 1.00 48.18 O
TER
Atoms:
C4: (9.153,95.371,95.914)
N3: (8.123,96.209,96.259)
OP1: (6.238,87.912,95.889)
OP2: (8.446,89.155,95.594)
C2: (6.845,95.851,96.601)
C1': (5.243,94.054,96.953)
C3': (4.498,92.598,95.271)
O5': (6.317,90.394,96.113)
O4': (5.300,92.720,97.439)
C5': (4.992,90.467,96.632)
P: (7.132,89.035,96.251)
C4': (4.476,91.876,96.600)
C2': (4.342,94.041,95.720)
O2': (3.025,94.357,96.110)
N1: (6.600,94.493,96.598)
O4: (10.249,95.850,95.633)
O2: (5.989,96.678,96.876)
C6: (7.591,93.599,96.264)
C5: (8.823,93.982,95.928)
O3': (3.449,92.204,94.411)
N3: (8.123,96.209,96.259)
OP1: (6.238,87.912,95.889)
OP2: (8.446,89.155,95.594)
C2: (6.845,95.851,96.601)
C1': (5.243,94.054,96.953)
C3': (4.498,92.598,95.271)
O5': (6.317,90.394,96.113)
O4': (5.300,92.720,97.439)
C5': (4.992,90.467,96.632)
P: (7.132,89.035,96.251)
C4': (4.476,91.876,96.600)
C2': (4.342,94.041,95.720)
O2': (3.025,94.357,96.110)
N1: (6.600,94.493,96.598)
O4: (10.249,95.850,95.633)
O2: (5.989,96.678,96.876)
C6: (7.591,93.599,96.264)
C5: (8.823,93.982,95.928)
O3': (3.449,92.204,94.411)
OP1: (-5.848,92.315,97.698)
OP2: (-5.426,94.333,99.217)
C3': (-0.965,92.667,97.560)
C1': (-0.112,94.563,96.452)
C5': (-3.259,92.816,96.431)
O4': (-1.382,94.252,95.900)
C8: (-1.406,96.243,97.861)
O2': (1.144,92.511,96.366)
C6: (0.936,98.686,98.855)
C5: (0.121,97.630,98.385)
C4: (0.737,96.651,97.622)
P: (-5.260,93.655,97.906)
C4': (-1.763,92.910,96.294)
C2': (0.362,93.325,97.219)
C2: (2.697,97.644,97.786)
N1: (2.245,98.661,98.531)
N3: (2.036,96.598,97.284)
N6: (0.485,99.699,99.596)
N7: (-1.235,97.358,98.531)
N9: (-0.257,95.762,97.279)
O5': (-3.706,93.526,97.595)
O3': (-0.839,91.286,97.854)
OP2: (-5.426,94.333,99.217)
C3': (-0.965,92.667,97.560)
C1': (-0.112,94.563,96.452)
C5': (-3.259,92.816,96.431)
O4': (-1.382,94.252,95.900)
C8: (-1.406,96.243,97.861)
O2': (1.144,92.511,96.366)
C6: (0.936,98.686,98.855)
C5: (0.121,97.630,98.385)
C4: (0.737,96.651,97.622)
P: (-5.260,93.655,97.906)
C4': (-1.763,92.910,96.294)
C2': (0.362,93.325,97.219)
C2: (2.697,97.644,97.786)
N1: (2.245,98.661,98.531)
N3: (2.036,96.598,97.284)
N6: (0.485,99.699,99.596)
N7: (-1.235,97.358,98.531)
N9: (-0.257,95.762,97.279)
O5': (-3.706,93.526,97.595)
O3': (-0.839,91.286,97.854)
Image (generated by PyMOL):