Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13060:12743
Extra
PDB:
ATOM 1 O3' A A3059 41.510 48.558 63.605 1.00 47.95 O
ATOM 2 P C A3060 42.670 49.503 63.067 1.00 43.89 P
ATOM 3 OP1 C A3060 42.726 50.658 63.985 1.00 44.32 O
ATOM 4 OP2 C A3060 42.424 49.731 61.627 1.00 43.98 O
ATOM 5 O5' C A3060 43.953 48.631 63.229 1.00 43.55 O
ATOM 6 C5' C A3060 44.471 48.316 64.494 1.00 43.45 C
ATOM 7 C4' C A3060 45.702 47.502 64.323 1.00 43.14 C
ATOM 8 O4' C A3060 45.335 46.252 63.733 1.00 42.70 O
ATOM 9 C3' C A3060 46.703 48.077 63.344 1.00 43.33 C
ATOM 10 O3' C A3060 47.537 49.062 63.940 1.00 43.69 O
ATOM 11 C2' C A3060 47.444 46.846 62.878 1.00 42.89 C
ATOM 12 O2' C A3060 48.334 46.404 63.896 1.00 42.75 O
ATOM 13 C1' C A3060 46.312 45.848 62.814 1.00 42.55 C
ATOM 14 N1 C A3060 45.694 45.745 61.489 1.00 42.52 N
ATOM 15 C2 C A3060 46.324 44.929 60.571 1.00 42.25 C
ATOM 16 O2 C A3060 47.377 44.433 60.916 1.00 42.08 O
ATOM 17 N3 C A3060 45.790 44.723 59.366 1.00 42.20 N
ATOM 18 C4 C A3060 44.638 45.324 59.065 1.00 42.42 C
ATOM 19 N4 C A3060 44.116 45.150 57.846 1.00 42.40 N
ATOM 20 C5 C A3060 43.969 46.153 60.000 1.00 42.70 C
ATOM 21 C6 C A3060 44.509 46.324 61.202 1.00 42.73 C
ATOM 22 P G A3061 48.255 50.156 63.043 1.00 47.49 P
ATOM 23 OP1 G A3061 49.297 50.747 63.862 1.00 47.72 O
ATOM 24 OP2 G A3061 47.202 51.032 62.477 1.00 47.81 O
ATOM 25 O5' G A3061 48.888 49.275 61.902 1.00 47.17 O
TER
ATOM 1 O3' G B2742 39.976 42.683 50.524 1.00 41.27 O
ATOM 2 P A B2743 41.421 43.262 50.179 1.00 40.86 P
ATOM 3 OP1 A B2743 41.247 44.673 49.851 1.00 41.35 O
ATOM 4 OP2 A B2743 42.024 42.358 49.161 1.00 40.64 O
ATOM 5 O5' A B2743 42.199 43.129 51.548 1.00 40.69 O
ATOM 6 C5' A B2743 42.073 44.124 52.546 1.00 40.95 C
ATOM 7 C4' A B2743 43.149 44.003 53.592 1.00 40.82 C
ATOM 8 O4' A B2743 43.249 42.636 54.061 1.00 40.35 O
ATOM 9 C3' A B2743 44.537 44.320 53.133 1.00 40.92 C
ATOM 10 O3' A B2743 44.764 45.690 53.101 1.00 41.37 O
ATOM 11 C2' A B2743 45.407 43.579 54.144 1.00 40.60 C
ATOM 12 O2' A B2743 45.487 44.286 55.366 1.00 40.77 O
ATOM 13 C1' A B2743 44.591 42.325 54.374 1.00 40.20 C
ATOM 14 N9 A B2743 45.028 41.228 53.496 1.00 39.90 N
ATOM 15 C8 A B2743 44.367 40.716 52.406 1.00 39.82 C
ATOM 16 N7 A B2743 45.015 39.740 51.822 1.00 39.55 N
ATOM 17 C5 A B2743 46.159 39.613 52.588 1.00 39.45 C
ATOM 18 C6 A B2743 47.250 38.772 52.483 1.00 39.20 C
ATOM 19 N6 A B2743 47.376 37.867 51.551 1.00 39.00 N
ATOM 20 N1 A B2743 48.230 38.901 53.377 1.00 39.18 N
ATOM 21 C2 A B2743 48.125 39.831 54.339 1.00 39.41 C
ATOM 22 N3 A B2743 47.157 40.674 54.556 1.00 39.65 N
ATOM 23 C4 A B2743 46.194 40.515 53.626 1.00 39.66 C
ATOM 24 P U B2744 45.667 46.286 51.983 1.00 48.65 P
ATOM 25 OP1 U B2744 45.701 47.730 52.202 1.00 49.13 O
ATOM 26 OP2 U B2744 45.156 45.778 50.721 1.00 48.57 O
ATOM 27 O5' U B2744 47.071 45.633 52.295 1.00 48.39 O
TER
ATOM 2 P C A3060 42.670 49.503 63.067 1.00 43.89 P
ATOM 3 OP1 C A3060 42.726 50.658 63.985 1.00 44.32 O
ATOM 4 OP2 C A3060 42.424 49.731 61.627 1.00 43.98 O
ATOM 5 O5' C A3060 43.953 48.631 63.229 1.00 43.55 O
ATOM 6 C5' C A3060 44.471 48.316 64.494 1.00 43.45 C
ATOM 7 C4' C A3060 45.702 47.502 64.323 1.00 43.14 C
ATOM 8 O4' C A3060 45.335 46.252 63.733 1.00 42.70 O
ATOM 9 C3' C A3060 46.703 48.077 63.344 1.00 43.33 C
ATOM 10 O3' C A3060 47.537 49.062 63.940 1.00 43.69 O
ATOM 11 C2' C A3060 47.444 46.846 62.878 1.00 42.89 C
ATOM 12 O2' C A3060 48.334 46.404 63.896 1.00 42.75 O
ATOM 13 C1' C A3060 46.312 45.848 62.814 1.00 42.55 C
ATOM 14 N1 C A3060 45.694 45.745 61.489 1.00 42.52 N
ATOM 15 C2 C A3060 46.324 44.929 60.571 1.00 42.25 C
ATOM 16 O2 C A3060 47.377 44.433 60.916 1.00 42.08 O
ATOM 17 N3 C A3060 45.790 44.723 59.366 1.00 42.20 N
ATOM 18 C4 C A3060 44.638 45.324 59.065 1.00 42.42 C
ATOM 19 N4 C A3060 44.116 45.150 57.846 1.00 42.40 N
ATOM 20 C5 C A3060 43.969 46.153 60.000 1.00 42.70 C
ATOM 21 C6 C A3060 44.509 46.324 61.202 1.00 42.73 C
ATOM 22 P G A3061 48.255 50.156 63.043 1.00 47.49 P
ATOM 23 OP1 G A3061 49.297 50.747 63.862 1.00 47.72 O
ATOM 24 OP2 G A3061 47.202 51.032 62.477 1.00 47.81 O
ATOM 25 O5' G A3061 48.888 49.275 61.902 1.00 47.17 O
TER
ATOM 1 O3' G B2742 39.976 42.683 50.524 1.00 41.27 O
ATOM 2 P A B2743 41.421 43.262 50.179 1.00 40.86 P
ATOM 3 OP1 A B2743 41.247 44.673 49.851 1.00 41.35 O
ATOM 4 OP2 A B2743 42.024 42.358 49.161 1.00 40.64 O
ATOM 5 O5' A B2743 42.199 43.129 51.548 1.00 40.69 O
ATOM 6 C5' A B2743 42.073 44.124 52.546 1.00 40.95 C
ATOM 7 C4' A B2743 43.149 44.003 53.592 1.00 40.82 C
ATOM 8 O4' A B2743 43.249 42.636 54.061 1.00 40.35 O
ATOM 9 C3' A B2743 44.537 44.320 53.133 1.00 40.92 C
ATOM 10 O3' A B2743 44.764 45.690 53.101 1.00 41.37 O
ATOM 11 C2' A B2743 45.407 43.579 54.144 1.00 40.60 C
ATOM 12 O2' A B2743 45.487 44.286 55.366 1.00 40.77 O
ATOM 13 C1' A B2743 44.591 42.325 54.374 1.00 40.20 C
ATOM 14 N9 A B2743 45.028 41.228 53.496 1.00 39.90 N
ATOM 15 C8 A B2743 44.367 40.716 52.406 1.00 39.82 C
ATOM 16 N7 A B2743 45.015 39.740 51.822 1.00 39.55 N
ATOM 17 C5 A B2743 46.159 39.613 52.588 1.00 39.45 C
ATOM 18 C6 A B2743 47.250 38.772 52.483 1.00 39.20 C
ATOM 19 N6 A B2743 47.376 37.867 51.551 1.00 39.00 N
ATOM 20 N1 A B2743 48.230 38.901 53.377 1.00 39.18 N
ATOM 21 C2 A B2743 48.125 39.831 54.339 1.00 39.41 C
ATOM 22 N3 A B2743 47.157 40.674 54.556 1.00 39.65 N
ATOM 23 C4 A B2743 46.194 40.515 53.626 1.00 39.66 C
ATOM 24 P U B2744 45.667 46.286 51.983 1.00 48.65 P
ATOM 25 OP1 U B2744 45.701 47.730 52.202 1.00 49.13 O
ATOM 26 OP2 U B2744 45.156 45.778 50.721 1.00 48.57 O
ATOM 27 O5' U B2744 47.071 45.633 52.295 1.00 48.39 O
TER
Atoms:
C2: (46.324,44.929,60.571)
OP1: (42.726,50.658,63.985)
OP2: (42.424,49.731,61.627)
C4: (44.638,45.324,59.065)
O5': (43.953,48.631,63.229)
C3': (46.703,48.077,63.344)
C1': (46.312,45.848,62.814)
O4': (45.335,46.252,63.733)
C5': (44.471,48.316,64.494)
P: (42.670,49.503,63.067)
O2: (47.377,44.433,60.916)
C4': (45.702,47.502,64.323)
C2': (47.444,46.846,62.878)
O2': (48.334,46.404,63.896)
N1: (45.694,45.745,61.489)
N3: (45.790,44.723,59.366)
N4: (44.116,45.150,57.846)
C6: (44.509,46.324,61.202)
C5: (43.969,46.153,60.000)
O3': (47.537,49.062,63.940)
OP1: (42.726,50.658,63.985)
OP2: (42.424,49.731,61.627)
C4: (44.638,45.324,59.065)
O5': (43.953,48.631,63.229)
C3': (46.703,48.077,63.344)
C1': (46.312,45.848,62.814)
O4': (45.335,46.252,63.733)
C5': (44.471,48.316,64.494)
P: (42.670,49.503,63.067)
O2: (47.377,44.433,60.916)
C4': (45.702,47.502,64.323)
C2': (47.444,46.846,62.878)
O2': (48.334,46.404,63.896)
N1: (45.694,45.745,61.489)
N3: (45.790,44.723,59.366)
N4: (44.116,45.150,57.846)
C6: (44.509,46.324,61.202)
C5: (43.969,46.153,60.000)
O3': (47.537,49.062,63.940)
OP1: (41.247,44.673,49.851)
OP2: (42.024,42.358,49.161)
C3': (44.537,44.320,53.133)
C1': (44.591,42.325,54.374)
C5': (42.073,44.124,52.546)
O4': (43.249,42.636,54.061)
C8: (44.367,40.716,52.406)
O2': (45.487,44.286,55.366)
C6: (47.250,38.772,52.483)
C5: (46.159,39.613,52.588)
C4: (46.194,40.515,53.626)
P: (41.421,43.262,50.179)
C4': (43.149,44.003,53.592)
C2': (45.407,43.579,54.144)
C2: (48.125,39.831,54.339)
N1: (48.230,38.901,53.377)
N3: (47.157,40.674,54.556)
N6: (47.376,37.867,51.551)
N7: (45.015,39.740,51.822)
N9: (45.028,41.228,53.496)
O5': (42.199,43.129,51.548)
O3': (44.764,45.690,53.101)
OP2: (42.024,42.358,49.161)
C3': (44.537,44.320,53.133)
C1': (44.591,42.325,54.374)
C5': (42.073,44.124,52.546)
O4': (43.249,42.636,54.061)
C8: (44.367,40.716,52.406)
O2': (45.487,44.286,55.366)
C6: (47.250,38.772,52.483)
C5: (46.159,39.613,52.588)
C4: (46.194,40.515,53.626)
P: (41.421,43.262,50.179)
C4': (43.149,44.003,53.592)
C2': (45.407,43.579,54.144)
C2: (48.125,39.831,54.339)
N1: (48.230,38.901,53.377)
N3: (47.157,40.674,54.556)
N6: (47.376,37.867,51.551)
N7: (45.015,39.740,51.822)
N9: (45.028,41.228,53.496)
O5': (42.199,43.129,51.548)
O3': (44.764,45.690,53.101)
Image (generated by PyMOL):