Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2002:A1327
Extra
PDB:
ATOM 1 O3' A A2001 52.350 142.204 84.745 1.00 32.80 O
ATOM 2 P C A2002 51.655 140.768 84.943 1.00 32.04 P
ATOM 3 OP1 C A2002 52.157 139.869 83.908 1.00 30.82 O
ATOM 4 OP2 C A2002 50.201 140.999 85.088 1.00 32.36 O
ATOM 5 O5' C A2002 52.185 140.249 86.343 1.00 29.79 O
ATOM 6 C5' C A2002 53.544 139.843 86.539 1.00 29.77 C
ATOM 7 C4' C A2002 53.739 139.527 87.989 1.00 30.95 C
ATOM 8 O4' C A2002 53.324 140.690 88.747 1.00 33.54 O
ATOM 9 C3' C A2002 52.886 138.405 88.563 1.00 31.68 C
ATOM 10 O3' C A2002 53.497 137.152 88.350 1.00 31.41 O
ATOM 11 C2' C A2002 52.863 138.752 90.040 1.00 31.97 C
ATOM 12 O2' C A2002 54.063 138.363 90.662 1.00 32.27 O
ATOM 13 C1' C A2002 52.803 140.277 89.995 1.00 33.39 C
ATOM 14 N1 C A2002 51.432 140.802 90.168 1.00 34.48 N
ATOM 15 C2 C A2002 50.970 141.012 91.471 1.00 36.34 C
ATOM 16 O2 C A2002 51.712 140.739 92.421 1.00 39.30 O
ATOM 17 N3 C A2002 49.729 141.499 91.673 1.00 37.05 N
ATOM 18 C4 C A2002 48.944 141.771 90.631 1.00 37.62 C
ATOM 19 N4 C A2002 47.713 142.240 90.879 1.00 38.38 N
ATOM 20 C5 C A2002 49.383 141.565 89.282 1.00 37.82 C
ATOM 21 C6 C A2002 50.624 141.078 89.100 1.00 35.26 C
ATOM 22 P U A2003 52.683 135.964 87.628 1.00 32.40 P
ATOM 23 OP1 U A2003 53.626 134.830 87.556 1.00 35.10 O
ATOM 24 OP2 U A2003 52.055 136.465 86.392 1.00 32.97 O
ATOM 25 O5' U A2003 51.501 135.572 88.618 1.00 30.94 O
TER
ATOM 1 O3' A B1326 38.910 144.024 92.527 1.00 35.33 O
ATOM 2 P U B1327 39.815 145.230 93.003 1.00 35.93 P
ATOM 3 OP1 U B1327 39.393 145.576 94.360 1.00 36.50 O
ATOM 4 OP2 U B1327 39.770 146.247 91.926 1.00 35.25 O
ATOM 5 O5' U B1327 41.279 144.621 93.033 1.00 34.91 O
ATOM 6 C5' U B1327 41.656 143.582 93.946 1.00 34.69 C
ATOM 7 C4' U B1327 43.049 143.139 93.613 1.00 34.32 C
ATOM 8 O4' U B1327 43.060 142.716 92.227 1.00 34.70 O
ATOM 9 C3' U B1327 44.028 144.292 93.633 1.00 34.39 C
ATOM 10 O3' U B1327 44.486 144.536 94.957 1.00 34.20 O
ATOM 11 C2' U B1327 45.108 143.816 92.676 1.00 34.20 C
ATOM 12 O2' U B1327 45.953 142.868 93.276 1.00 37.10 O
ATOM 13 C1' U B1327 44.266 143.117 91.613 1.00 34.96 C
ATOM 14 N1 U B1327 43.959 144.000 90.478 1.00 37.43 N
ATOM 15 C2 U B1327 44.818 143.964 89.408 1.00 38.55 C
ATOM 16 O2 U B1327 45.784 143.234 89.367 1.00 40.62 O
ATOM 17 N3 U B1327 44.506 144.817 88.381 1.00 38.68 N
ATOM 18 C4 U B1327 43.435 145.671 88.302 1.00 39.80 C
ATOM 19 O4 U B1327 43.150 146.166 87.214 1.00 41.95 O
ATOM 20 C5 U B1327 42.600 145.668 89.452 1.00 39.81 C
ATOM 21 C6 U B1327 42.875 144.848 90.473 1.00 39.34 C
ATOM 22 P A B1328 45.166 145.941 95.309 1.00 33.46 P
ATOM 23 OP1 A B1328 46.337 146.112 94.425 1.00 34.19 O
ATOM 24 OP2 A B1328 45.331 146.047 96.765 1.00 34.23 O
ATOM 25 O5' A B1328 44.068 146.996 94.858 1.00 33.88 O
TER
ATOM 2 P C A2002 51.655 140.768 84.943 1.00 32.04 P
ATOM 3 OP1 C A2002 52.157 139.869 83.908 1.00 30.82 O
ATOM 4 OP2 C A2002 50.201 140.999 85.088 1.00 32.36 O
ATOM 5 O5' C A2002 52.185 140.249 86.343 1.00 29.79 O
ATOM 6 C5' C A2002 53.544 139.843 86.539 1.00 29.77 C
ATOM 7 C4' C A2002 53.739 139.527 87.989 1.00 30.95 C
ATOM 8 O4' C A2002 53.324 140.690 88.747 1.00 33.54 O
ATOM 9 C3' C A2002 52.886 138.405 88.563 1.00 31.68 C
ATOM 10 O3' C A2002 53.497 137.152 88.350 1.00 31.41 O
ATOM 11 C2' C A2002 52.863 138.752 90.040 1.00 31.97 C
ATOM 12 O2' C A2002 54.063 138.363 90.662 1.00 32.27 O
ATOM 13 C1' C A2002 52.803 140.277 89.995 1.00 33.39 C
ATOM 14 N1 C A2002 51.432 140.802 90.168 1.00 34.48 N
ATOM 15 C2 C A2002 50.970 141.012 91.471 1.00 36.34 C
ATOM 16 O2 C A2002 51.712 140.739 92.421 1.00 39.30 O
ATOM 17 N3 C A2002 49.729 141.499 91.673 1.00 37.05 N
ATOM 18 C4 C A2002 48.944 141.771 90.631 1.00 37.62 C
ATOM 19 N4 C A2002 47.713 142.240 90.879 1.00 38.38 N
ATOM 20 C5 C A2002 49.383 141.565 89.282 1.00 37.82 C
ATOM 21 C6 C A2002 50.624 141.078 89.100 1.00 35.26 C
ATOM 22 P U A2003 52.683 135.964 87.628 1.00 32.40 P
ATOM 23 OP1 U A2003 53.626 134.830 87.556 1.00 35.10 O
ATOM 24 OP2 U A2003 52.055 136.465 86.392 1.00 32.97 O
ATOM 25 O5' U A2003 51.501 135.572 88.618 1.00 30.94 O
TER
ATOM 1 O3' A B1326 38.910 144.024 92.527 1.00 35.33 O
ATOM 2 P U B1327 39.815 145.230 93.003 1.00 35.93 P
ATOM 3 OP1 U B1327 39.393 145.576 94.360 1.00 36.50 O
ATOM 4 OP2 U B1327 39.770 146.247 91.926 1.00 35.25 O
ATOM 5 O5' U B1327 41.279 144.621 93.033 1.00 34.91 O
ATOM 6 C5' U B1327 41.656 143.582 93.946 1.00 34.69 C
ATOM 7 C4' U B1327 43.049 143.139 93.613 1.00 34.32 C
ATOM 8 O4' U B1327 43.060 142.716 92.227 1.00 34.70 O
ATOM 9 C3' U B1327 44.028 144.292 93.633 1.00 34.39 C
ATOM 10 O3' U B1327 44.486 144.536 94.957 1.00 34.20 O
ATOM 11 C2' U B1327 45.108 143.816 92.676 1.00 34.20 C
ATOM 12 O2' U B1327 45.953 142.868 93.276 1.00 37.10 O
ATOM 13 C1' U B1327 44.266 143.117 91.613 1.00 34.96 C
ATOM 14 N1 U B1327 43.959 144.000 90.478 1.00 37.43 N
ATOM 15 C2 U B1327 44.818 143.964 89.408 1.00 38.55 C
ATOM 16 O2 U B1327 45.784 143.234 89.367 1.00 40.62 O
ATOM 17 N3 U B1327 44.506 144.817 88.381 1.00 38.68 N
ATOM 18 C4 U B1327 43.435 145.671 88.302 1.00 39.80 C
ATOM 19 O4 U B1327 43.150 146.166 87.214 1.00 41.95 O
ATOM 20 C5 U B1327 42.600 145.668 89.452 1.00 39.81 C
ATOM 21 C6 U B1327 42.875 144.848 90.473 1.00 39.34 C
ATOM 22 P A B1328 45.166 145.941 95.309 1.00 33.46 P
ATOM 23 OP1 A B1328 46.337 146.112 94.425 1.00 34.19 O
ATOM 24 OP2 A B1328 45.331 146.047 96.765 1.00 34.23 O
ATOM 25 O5' A B1328 44.068 146.996 94.858 1.00 33.88 O
TER
Atoms:
C2: (50.970,141.012,91.471)
OP1: (52.157,139.869,83.908)
OP2: (50.201,140.999,85.088)
C4: (48.944,141.771,90.631)
O5': (52.185,140.249,86.343)
C3': (52.886,138.405,88.563)
C1': (52.803,140.277,89.995)
O4': (53.324,140.690,88.747)
C5': (53.544,139.843,86.539)
P: (51.655,140.768,84.943)
O2: (51.712,140.739,92.421)
C4': (53.739,139.527,87.989)
C2': (52.863,138.752,90.040)
O2': (54.063,138.363,90.662)
N1: (51.432,140.802,90.168)
N3: (49.729,141.499,91.673)
N4: (47.713,142.240,90.879)
C6: (50.624,141.078,89.100)
C5: (49.383,141.565,89.282)
O3': (53.497,137.152,88.350)
OP1: (52.157,139.869,83.908)
OP2: (50.201,140.999,85.088)
C4: (48.944,141.771,90.631)
O5': (52.185,140.249,86.343)
C3': (52.886,138.405,88.563)
C1': (52.803,140.277,89.995)
O4': (53.324,140.690,88.747)
C5': (53.544,139.843,86.539)
P: (51.655,140.768,84.943)
O2: (51.712,140.739,92.421)
C4': (53.739,139.527,87.989)
C2': (52.863,138.752,90.040)
O2': (54.063,138.363,90.662)
N1: (51.432,140.802,90.168)
N3: (49.729,141.499,91.673)
N4: (47.713,142.240,90.879)
C6: (50.624,141.078,89.100)
C5: (49.383,141.565,89.282)
O3': (53.497,137.152,88.350)
C4: (43.435,145.671,88.302)
N3: (44.506,144.817,88.381)
OP1: (39.393,145.576,94.360)
OP2: (39.770,146.247,91.926)
C2: (44.818,143.964,89.408)
C1': (44.266,143.117,91.613)
C3': (44.028,144.292,93.633)
O5': (41.279,144.621,93.033)
O4': (43.060,142.716,92.227)
C5': (41.656,143.582,93.946)
P: (39.815,145.230,93.003)
C4': (43.049,143.139,93.613)
C2': (45.108,143.816,92.676)
O2': (45.953,142.868,93.276)
N1: (43.959,144.000,90.478)
O4: (43.150,146.166,87.214)
O2: (45.784,143.234,89.367)
C6: (42.875,144.848,90.473)
C5: (42.600,145.668,89.452)
O3': (44.486,144.536,94.957)
N3: (44.506,144.817,88.381)
OP1: (39.393,145.576,94.360)
OP2: (39.770,146.247,91.926)
C2: (44.818,143.964,89.408)
C1': (44.266,143.117,91.613)
C3': (44.028,144.292,93.633)
O5': (41.279,144.621,93.033)
O4': (43.060,142.716,92.227)
C5': (41.656,143.582,93.946)
P: (39.815,145.230,93.003)
C4': (43.049,143.139,93.613)
C2': (45.108,143.816,92.676)
O2': (45.953,142.868,93.276)
N1: (43.959,144.000,90.478)
O4: (43.150,146.166,87.214)
O2: (45.784,143.234,89.367)
C6: (42.875,144.848,90.473)
C5: (42.600,145.668,89.452)
O3': (44.486,144.536,94.957)
Image (generated by PyMOL):