ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:02002:01327

Extra

PDB:
ATOM 1 O3' A A2001 51.774 141.526 84.296 1.00 36.34 O
ATOM 2 P C A2002 51.125 140.058 84.376 1.00 35.47 P
ATOM 3 OP1 C A2002 51.770 139.309 83.260 1.00 36.61 O
ATOM 4 OP2 C A2002 49.655 140.155 84.434 1.00 35.01 O
ATOM 5 O5' C A2002 51.630 139.466 85.765 1.00 35.44 O
ATOM 6 C5' C A2002 52.990 139.023 85.931 1.00 35.73 C
ATOM 7 C4' C A2002 53.265 138.698 87.381 1.00 35.81 C
ATOM 8 O4' C A2002 52.886 139.835 88.200 1.00 37.59 O
ATOM 9 C3' C A2002 52.463 137.558 87.982 1.00 35.28 C
ATOM 10 O3' C A2002 53.058 136.305 87.699 1.00 35.69 O
ATOM 11 C2' C A2002 52.550 137.852 89.469 1.00 36.11 C
ATOM 12 O2' C A2002 53.788 137.454 90.013 1.00 36.51 O
ATOM 13 C1' C A2002 52.469 139.377 89.477 1.00 37.15 C
ATOM 14 N1 C A2002 51.118 139.887 89.755 1.00 38.92 N
ATOM 15 C2 C A2002 50.726 140.045 91.087 1.00 41.02 C
ATOM 16 O2 C A2002 51.520 139.734 91.992 1.00 44.41 O
ATOM 17 N3 C A2002 49.497 140.527 91.359 1.00 41.84 N
ATOM 18 C4 C A2002 48.668 140.839 90.366 1.00 41.38 C
ATOM 19 N4 C A2002 47.461 141.303 90.690 1.00 44.32 N
ATOM 20 C5 C A2002 49.037 140.685 89.001 1.00 39.94 C
ATOM 21 C6 C A2002 50.259 140.208 88.742 1.00 38.78 C
ATOM 22 P U A2003 52.184 135.149 87.023 1.00 35.18 P
ATOM 23 OP1 U A2003 53.064 133.983 86.810 1.00 37.03 O
ATOM 24 OP2 U A2003 51.487 135.767 85.862 1.00 36.05 O
ATOM 25 O5' U A2003 51.080 134.786 88.109 1.00 34.46 O
TER

ATOM 1 O3' A B1326 38.413 143.085 92.404 1.00 34.43 O
ATOM 2 P U B1327 39.259 144.400 92.787 1.00 35.04 P
ATOM 3 OP1 U B1327 38.854 144.768 94.169 1.00 33.93 O
ATOM 4 OP2 U B1327 39.124 145.387 91.696 1.00 32.14 O
ATOM 5 O5' U B1327 40.775 143.907 92.815 1.00 33.44 O
ATOM 6 C5' U B1327 41.182 142.833 93.673 1.00 32.60 C
ATOM 7 C4' U B1327 42.560 142.352 93.291 1.00 35.02 C
ATOM 8 O4' U B1327 42.558 141.864 91.926 1.00 35.17 O
ATOM 9 C3' U B1327 43.652 143.407 93.303 1.00 35.20 C
ATOM 10 O3' U B1327 44.139 143.598 94.626 1.00 35.51 O
ATOM 11 C2' U B1327 44.699 142.794 92.383 1.00 34.68 C
ATOM 12 O2' U B1327 45.459 141.782 93.015 1.00 38.17 O
ATOM 13 C1' U B1327 43.815 142.136 91.324 1.00 34.81 C
ATOM 14 N1 U B1327 43.600 142.975 90.137 1.00 34.68 N
ATOM 15 C2 U B1327 44.508 142.863 89.094 1.00 35.78 C
ATOM 16 O2 U B1327 45.486 142.140 89.135 1.00 38.96 O
ATOM 17 N3 U B1327 44.228 143.634 88.001 1.00 36.07 N
ATOM 18 C4 U B1327 43.175 144.500 87.853 1.00 35.84 C
ATOM 19 O4 U B1327 43.050 145.114 86.805 1.00 39.12 O
ATOM 20 C5 U B1327 42.305 144.590 88.984 1.00 37.00 C
ATOM 21 C6 U B1327 42.538 143.838 90.057 1.00 33.78 C
ATOM 22 P A B1328 44.674 145.037 95.077 1.00 34.67 P
ATOM 23 OP1 A B1328 45.787 145.424 94.193 1.00 39.47 O
ATOM 24 OP2 A B1328 44.885 144.980 96.541 1.00 39.14 O
ATOM 25 O5' A B1328 43.474 146.030 94.753 1.00 34.65 O
TER

Atoms:
C2: (50.726,140.045,91.087)
OP1: (51.770,139.309,83.260)
OP2: (49.655,140.155,84.434)
C4: (48.668,140.839,90.366)
O5': (51.630,139.466,85.765)
C3': (52.463,137.558,87.982)
C1': (52.469,139.377,89.477)
O4': (52.886,139.835,88.200)
C5': (52.990,139.023,85.931)
P: (51.125,140.058,84.376)
O2: (51.520,139.734,91.992)
C4': (53.265,138.698,87.381)
C2': (52.550,137.852,89.469)
O2': (53.788,137.454,90.013)
N1: (51.118,139.887,89.755)
N3: (49.497,140.527,91.359)
N4: (47.461,141.303,90.690)
C6: (50.259,140.208,88.742)
C5: (49.037,140.685,89.001)
O3': (53.058,136.305,87.699)
C4: (43.175,144.500,87.853)
N3: (44.228,143.634,88.001)
OP1: (38.854,144.768,94.169)
OP2: (39.124,145.387,91.696)
C2: (44.508,142.863,89.094)
C1': (43.815,142.136,91.324)
C3': (43.652,143.407,93.303)
O5': (40.775,143.907,92.815)
O4': (42.558,141.864,91.926)
C5': (41.182,142.833,93.673)
P: (39.259,144.400,92.787)
C4': (42.560,142.352,93.291)
C2': (44.699,142.794,92.383)
O2': (45.459,141.782,93.015)
N1: (43.600,142.975,90.137)
O4: (43.050,145.114,86.805)
O2: (45.486,142.140,89.135)
C6: (42.538,143.838,90.057)
C5: (42.305,144.590,88.984)
O3': (44.139,143.598,94.626)
Image (generated by PyMOL):
PyMOL image
show in jmol