ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:02002:01327

Extra

PDB:
ATOM 1 O3' A A2001 51.981 142.150 84.471 1.00 30.96 O
ATOM 2 P C A2002 51.354 140.683 84.631 1.00 32.20 P
ATOM 3 OP1 C A2002 51.961 139.878 83.536 1.00 30.37 O
ATOM 4 OP2 C A2002 49.880 140.804 84.724 1.00 31.98 O
ATOM 5 O5' C A2002 51.909 140.145 86.029 1.00 31.39 O
ATOM 6 C5' C A2002 53.289 139.736 86.176 1.00 29.60 C
ATOM 7 C4' C A2002 53.588 139.426 87.619 1.00 30.86 C
ATOM 8 O4' C A2002 53.236 140.578 88.420 1.00 33.06 O
ATOM 9 C3' C A2002 52.769 138.305 88.226 1.00 33.62 C
ATOM 10 O3' C A2002 53.353 137.044 87.960 1.00 34.46 O
ATOM 11 C2' C A2002 52.804 138.631 89.710 1.00 34.52 C
ATOM 12 O2' C A2002 53.986 138.200 90.351 1.00 35.61 O
ATOM 13 C1' C A2002 52.752 140.158 89.680 1.00 34.16 C
ATOM 14 N1 C A2002 51.400 140.709 89.877 1.00 36.52 N
ATOM 15 C2 C A2002 50.951 140.938 91.184 1.00 38.21 C
ATOM 16 O2 C A2002 51.701 140.666 92.138 1.00 41.36 O
ATOM 17 N3 C A2002 49.716 141.441 91.379 1.00 38.68 N
ATOM 18 C4 C A2002 48.932 141.704 90.337 1.00 39.24 C
ATOM 19 N4 C A2002 47.705 142.174 90.581 1.00 39.21 N
ATOM 20 C5 C A2002 49.363 141.488 88.998 1.00 39.41 C
ATOM 21 C6 C A2002 50.592 140.993 88.815 1.00 37.66 C
ATOM 22 P U A2003 52.491 135.910 87.232 1.00 34.91 P
ATOM 23 OP1 U A2003 53.405 134.764 87.017 1.00 34.92 O
ATOM 24 OP2 U A2003 51.825 136.546 86.058 1.00 36.04 O
ATOM 25 O5' U A2003 51.353 135.535 88.286 1.00 32.22 O
TER

ATOM 1 O3' A B1326 38.846 143.844 92.314 1.00 35.37 O
ATOM 2 P U B1327 39.644 145.160 92.735 1.00 35.62 P
ATOM 3 OP1 U B1327 39.163 145.541 94.078 1.00 35.98 O
ATOM 4 OP2 U B1327 39.544 146.127 91.621 1.00 34.04 O
ATOM 5 O5' U B1327 41.161 144.693 92.844 1.00 36.77 O
ATOM 6 C5' U B1327 41.554 143.574 93.658 1.00 34.97 C
ATOM 7 C4' U B1327 42.970 143.157 93.311 1.00 36.01 C
ATOM 8 O4' U B1327 43.008 142.641 91.956 1.00 36.58 O
ATOM 9 C3' U B1327 43.996 144.280 93.319 1.00 35.83 C
ATOM 10 O3' U B1327 44.476 144.473 94.640 1.00 36.24 O
ATOM 11 C2' U B1327 45.066 143.753 92.372 1.00 36.31 C
ATOM 12 O2' U B1327 45.919 142.795 92.960 1.00 38.04 O
ATOM 13 C1' U B1327 44.214 143.036 91.327 1.00 36.97 C
ATOM 14 N1 U B1327 43.881 143.875 90.167 1.00 39.01 N
ATOM 15 C2 U B1327 44.662 143.748 89.041 1.00 39.76 C
ATOM 16 O2 U B1327 45.604 142.985 88.971 1.00 42.97 O
ATOM 17 N3 U B1327 44.303 144.550 87.993 1.00 39.05 N
ATOM 18 C4 U B1327 43.264 145.445 87.955 1.00 41.27 C
ATOM 19 O4 U B1327 43.018 146.040 86.904 1.00 45.91 O
ATOM 20 C5 U B1327 42.507 145.529 89.161 1.00 41.54 C
ATOM 21 C6 U B1327 42.831 144.761 90.198 1.00 41.00 C
ATOM 22 P A B1328 45.035 145.903 95.095 1.00 34.78 P
ATOM 23 OP1 A B1328 46.238 146.207 94.309 1.00 38.38 O
ATOM 24 OP2 A B1328 45.111 145.875 96.570 1.00 36.93 O
ATOM 25 O5' A B1328 43.920 146.946 94.655 1.00 35.16 O
TER

Atoms:
C2: (50.951,140.938,91.184)
OP1: (51.961,139.878,83.536)
OP2: (49.880,140.804,84.724)
C4: (48.932,141.704,90.337)
O5': (51.909,140.145,86.029)
C3': (52.769,138.305,88.226)
C1': (52.752,140.158,89.680)
O4': (53.236,140.578,88.420)
C5': (53.289,139.736,86.176)
P: (51.354,140.683,84.631)
O2: (51.701,140.666,92.138)
C4': (53.588,139.426,87.619)
C2': (52.804,138.631,89.710)
O2': (53.986,138.200,90.351)
N1: (51.400,140.709,89.877)
N3: (49.716,141.441,91.379)
N4: (47.705,142.174,90.581)
C6: (50.592,140.993,88.815)
C5: (49.363,141.488,88.998)
O3': (53.353,137.044,87.960)
C4: (43.264,145.445,87.955)
N3: (44.303,144.550,87.993)
OP1: (39.163,145.541,94.078)
OP2: (39.544,146.127,91.621)
C2: (44.662,143.748,89.041)
C1': (44.214,143.036,91.327)
C3': (43.996,144.280,93.319)
O5': (41.161,144.693,92.844)
O4': (43.008,142.641,91.956)
C5': (41.554,143.574,93.658)
P: (39.644,145.160,92.735)
C4': (42.970,143.157,93.311)
C2': (45.066,143.753,92.372)
O2': (45.919,142.795,92.960)
N1: (43.881,143.875,90.167)
O4: (43.018,146.040,86.904)
O2: (45.604,142.985,88.971)
C6: (42.831,144.761,90.198)
C5: (42.507,145.529,89.161)
O3': (44.476,144.473,94.640)
Image (generated by PyMOL):
PyMOL image
show in jmol