Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01711:01980
Extra
PDB:
ATOM 1 O3' G A1710 86.540 145.239 110.943 1.00 37.05 O
ATOM 2 P C A1711 87.148 145.275 109.449 1.00 36.37 P
ATOM 3 OP1 C A1711 87.774 143.961 109.148 1.00 35.50 O
ATOM 4 OP2 C A1711 87.956 146.512 109.317 1.00 36.44 O
ATOM 5 O5' C A1711 85.860 145.467 108.532 1.00 36.88 O
ATOM 6 C5' C A1711 85.566 144.584 107.426 1.00 33.16 C
ATOM 7 C4' C A1711 84.069 144.480 107.234 1.00 31.38 C
ATOM 8 O4' C A1711 83.476 143.863 108.409 1.00 30.91 O
ATOM 9 C3' C A1711 83.345 145.811 107.112 1.00 30.11 C
ATOM 10 O3' C A1711 83.374 146.299 105.783 1.00 30.99 O
ATOM 11 C2' C A1711 81.936 145.464 107.560 1.00 29.99 C
ATOM 12 O2' C A1711 81.189 144.816 106.557 1.00 33.44 O
ATOM 13 C1' C A1711 82.219 144.461 108.677 1.00 30.51 C
ATOM 14 N1 C A1711 82.261 145.096 110.005 1.00 31.67 N
ATOM 15 C2 C A1711 81.042 145.390 110.641 1.00 32.13 C
ATOM 16 O2 C A1711 79.982 145.080 110.080 1.00 33.26 O
ATOM 17 N3 C A1711 81.052 146.001 111.845 1.00 32.63 N
ATOM 18 C4 C A1711 82.213 146.318 112.424 1.00 33.19 C
ATOM 19 N4 C A1711 82.168 146.948 113.606 1.00 31.14 N
ATOM 20 C5 C A1711 83.473 146.010 111.811 1.00 33.17 C
ATOM 21 C6 C A1711 83.450 145.408 110.613 1.00 30.58 C
ATOM 22 P A A1712 83.679 147.850 105.514 1.00 31.93 P
ATOM 23 OP1 A A1712 83.492 148.071 104.064 1.00 27.36 O
ATOM 24 OP2 A A1712 84.986 148.167 106.142 1.00 32.01 O
ATOM 25 O5' A A1712 82.574 148.630 106.362 1.00 30.53 O
TER
ATOM 1 O3' G B1979 77.834 152.874 116.304 1.00 41.75 O
ATOM 2 P U B1980 78.504 152.207 115.004 1.00 42.11 P
ATOM 3 OP1 U B1980 79.870 152.752 114.865 1.00 44.61 O
ATOM 4 OP2 U B1980 77.547 152.337 113.879 1.00 43.69 O
ATOM 5 O5' U B1980 78.669 150.681 115.419 1.00 40.91 O
ATOM 6 C5' U B1980 78.384 149.620 114.501 1.00 39.33 C
ATOM 7 C4' U B1980 78.636 148.288 115.163 1.00 38.47 C
ATOM 8 O4' U B1980 80.062 148.105 115.392 1.00 38.22 O
ATOM 9 C3' U B1980 78.013 148.108 116.538 1.00 35.19 C
ATOM 10 O3' U B1980 76.636 147.768 116.434 1.00 33.58 O
ATOM 11 C2' U B1980 78.867 146.984 117.108 1.00 37.68 C
ATOM 12 O2' U B1980 78.551 145.707 116.593 1.00 34.81 O
ATOM 13 C1' U B1980 80.255 147.377 116.591 1.00 39.13 C
ATOM 14 N1 U B1980 80.969 148.224 117.561 1.00 41.91 N
ATOM 15 C2 U B1980 81.551 147.592 118.648 1.00 43.72 C
ATOM 16 O2 U B1980 81.562 146.384 118.780 1.00 45.35 O
ATOM 17 N3 U B1980 82.127 148.429 119.571 1.00 44.89 N
ATOM 18 C4 U B1980 82.199 149.801 119.513 1.00 44.72 C
ATOM 19 O4 U B1980 82.651 150.417 120.473 1.00 45.01 O
ATOM 20 C5 U B1980 81.621 150.380 118.336 1.00 43.99 C
ATOM 21 C6 U B1980 81.040 149.593 117.424 1.00 42.65 C
ATOM 22 P C B1981 75.624 148.120 117.632 1.00 29.13 P
ATOM 23 OP1 C B1981 74.342 147.436 117.341 1.00 31.82 O
ATOM 24 OP2 C B1981 75.620 149.567 117.886 1.00 27.62 O
ATOM 25 O5' C B1981 76.265 147.389 118.882 1.00 30.22 O
TER
ATOM 2 P C A1711 87.148 145.275 109.449 1.00 36.37 P
ATOM 3 OP1 C A1711 87.774 143.961 109.148 1.00 35.50 O
ATOM 4 OP2 C A1711 87.956 146.512 109.317 1.00 36.44 O
ATOM 5 O5' C A1711 85.860 145.467 108.532 1.00 36.88 O
ATOM 6 C5' C A1711 85.566 144.584 107.426 1.00 33.16 C
ATOM 7 C4' C A1711 84.069 144.480 107.234 1.00 31.38 C
ATOM 8 O4' C A1711 83.476 143.863 108.409 1.00 30.91 O
ATOM 9 C3' C A1711 83.345 145.811 107.112 1.00 30.11 C
ATOM 10 O3' C A1711 83.374 146.299 105.783 1.00 30.99 O
ATOM 11 C2' C A1711 81.936 145.464 107.560 1.00 29.99 C
ATOM 12 O2' C A1711 81.189 144.816 106.557 1.00 33.44 O
ATOM 13 C1' C A1711 82.219 144.461 108.677 1.00 30.51 C
ATOM 14 N1 C A1711 82.261 145.096 110.005 1.00 31.67 N
ATOM 15 C2 C A1711 81.042 145.390 110.641 1.00 32.13 C
ATOM 16 O2 C A1711 79.982 145.080 110.080 1.00 33.26 O
ATOM 17 N3 C A1711 81.052 146.001 111.845 1.00 32.63 N
ATOM 18 C4 C A1711 82.213 146.318 112.424 1.00 33.19 C
ATOM 19 N4 C A1711 82.168 146.948 113.606 1.00 31.14 N
ATOM 20 C5 C A1711 83.473 146.010 111.811 1.00 33.17 C
ATOM 21 C6 C A1711 83.450 145.408 110.613 1.00 30.58 C
ATOM 22 P A A1712 83.679 147.850 105.514 1.00 31.93 P
ATOM 23 OP1 A A1712 83.492 148.071 104.064 1.00 27.36 O
ATOM 24 OP2 A A1712 84.986 148.167 106.142 1.00 32.01 O
ATOM 25 O5' A A1712 82.574 148.630 106.362 1.00 30.53 O
TER
ATOM 1 O3' G B1979 77.834 152.874 116.304 1.00 41.75 O
ATOM 2 P U B1980 78.504 152.207 115.004 1.00 42.11 P
ATOM 3 OP1 U B1980 79.870 152.752 114.865 1.00 44.61 O
ATOM 4 OP2 U B1980 77.547 152.337 113.879 1.00 43.69 O
ATOM 5 O5' U B1980 78.669 150.681 115.419 1.00 40.91 O
ATOM 6 C5' U B1980 78.384 149.620 114.501 1.00 39.33 C
ATOM 7 C4' U B1980 78.636 148.288 115.163 1.00 38.47 C
ATOM 8 O4' U B1980 80.062 148.105 115.392 1.00 38.22 O
ATOM 9 C3' U B1980 78.013 148.108 116.538 1.00 35.19 C
ATOM 10 O3' U B1980 76.636 147.768 116.434 1.00 33.58 O
ATOM 11 C2' U B1980 78.867 146.984 117.108 1.00 37.68 C
ATOM 12 O2' U B1980 78.551 145.707 116.593 1.00 34.81 O
ATOM 13 C1' U B1980 80.255 147.377 116.591 1.00 39.13 C
ATOM 14 N1 U B1980 80.969 148.224 117.561 1.00 41.91 N
ATOM 15 C2 U B1980 81.551 147.592 118.648 1.00 43.72 C
ATOM 16 O2 U B1980 81.562 146.384 118.780 1.00 45.35 O
ATOM 17 N3 U B1980 82.127 148.429 119.571 1.00 44.89 N
ATOM 18 C4 U B1980 82.199 149.801 119.513 1.00 44.72 C
ATOM 19 O4 U B1980 82.651 150.417 120.473 1.00 45.01 O
ATOM 20 C5 U B1980 81.621 150.380 118.336 1.00 43.99 C
ATOM 21 C6 U B1980 81.040 149.593 117.424 1.00 42.65 C
ATOM 22 P C B1981 75.624 148.120 117.632 1.00 29.13 P
ATOM 23 OP1 C B1981 74.342 147.436 117.341 1.00 31.82 O
ATOM 24 OP2 C B1981 75.620 149.567 117.886 1.00 27.62 O
ATOM 25 O5' C B1981 76.265 147.389 118.882 1.00 30.22 O
TER
Atoms:
C2: (81.042,145.390,110.641)
OP1: (87.774,143.961,109.148)
OP2: (87.956,146.512,109.317)
C4: (82.213,146.318,112.424)
O5': (85.860,145.467,108.532)
C3': (83.345,145.811,107.112)
C1': (82.219,144.461,108.677)
O4': (83.476,143.863,108.409)
C5': (85.566,144.584,107.426)
P: (87.148,145.275,109.449)
O2: (79.982,145.080,110.080)
C4': (84.069,144.480,107.234)
C2': (81.936,145.464,107.560)
O2': (81.189,144.816,106.557)
N1: (82.261,145.096,110.005)
N3: (81.052,146.001,111.845)
N4: (82.168,146.948,113.606)
C6: (83.450,145.408,110.613)
C5: (83.473,146.010,111.811)
O3': (83.374,146.299,105.783)
OP1: (87.774,143.961,109.148)
OP2: (87.956,146.512,109.317)
C4: (82.213,146.318,112.424)
O5': (85.860,145.467,108.532)
C3': (83.345,145.811,107.112)
C1': (82.219,144.461,108.677)
O4': (83.476,143.863,108.409)
C5': (85.566,144.584,107.426)
P: (87.148,145.275,109.449)
O2: (79.982,145.080,110.080)
C4': (84.069,144.480,107.234)
C2': (81.936,145.464,107.560)
O2': (81.189,144.816,106.557)
N1: (82.261,145.096,110.005)
N3: (81.052,146.001,111.845)
N4: (82.168,146.948,113.606)
C6: (83.450,145.408,110.613)
C5: (83.473,146.010,111.811)
O3': (83.374,146.299,105.783)
C4: (82.199,149.801,119.513)
N3: (82.127,148.429,119.571)
OP1: (79.870,152.752,114.865)
OP2: (77.547,152.337,113.879)
C2: (81.551,147.592,118.648)
C1': (80.255,147.377,116.591)
C3': (78.013,148.108,116.538)
O5': (78.669,150.681,115.419)
O4': (80.062,148.105,115.392)
C5': (78.384,149.620,114.501)
P: (78.504,152.207,115.004)
C4': (78.636,148.288,115.163)
C2': (78.867,146.984,117.108)
O2': (78.551,145.707,116.593)
N1: (80.969,148.224,117.561)
O4: (82.651,150.417,120.473)
O2: (81.562,146.384,118.780)
C6: (81.040,149.593,117.424)
C5: (81.621,150.380,118.336)
O3': (76.636,147.768,116.434)
N3: (82.127,148.429,119.571)
OP1: (79.870,152.752,114.865)
OP2: (77.547,152.337,113.879)
C2: (81.551,147.592,118.648)
C1': (80.255,147.377,116.591)
C3': (78.013,148.108,116.538)
O5': (78.669,150.681,115.419)
O4': (80.062,148.105,115.392)
C5': (78.384,149.620,114.501)
P: (78.504,152.207,115.004)
C4': (78.636,148.288,115.163)
C2': (78.867,146.984,117.108)
O2': (78.551,145.707,116.593)
N1: (80.969,148.224,117.561)
O4: (82.651,150.417,120.473)
O2: (81.562,146.384,118.780)
C6: (81.040,149.593,117.424)
C5: (81.621,150.380,118.336)
O3': (76.636,147.768,116.434)
Image (generated by PyMOL):