Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02002:01327
Extra
PDB:
ATOM 1 O3' A A2001 51.939 142.313 84.467 1.00 26.71 O
ATOM 2 P C A2002 51.355 140.835 84.625 1.00 27.49 P
ATOM 3 OP1 C A2002 52.009 140.070 83.530 1.00 27.09 O
ATOM 4 OP2 C A2002 49.876 140.885 84.703 1.00 29.61 O
ATOM 5 O5' C A2002 51.907 140.317 86.030 1.00 27.47 O
ATOM 6 C5' C A2002 53.274 139.879 86.179 1.00 25.75 C
ATOM 7 C4' C A2002 53.566 139.575 87.624 1.00 27.65 C
ATOM 8 O4' C A2002 53.216 140.732 88.425 1.00 29.51 O
ATOM 9 C3' C A2002 52.736 138.461 88.226 1.00 29.50 C
ATOM 10 O3' C A2002 53.310 137.198 87.945 1.00 30.00 O
ATOM 11 C2' C A2002 52.773 138.786 89.712 1.00 30.32 C
ATOM 12 O2' C A2002 53.960 138.381 90.357 1.00 32.08 O
ATOM 13 C1' C A2002 52.722 140.311 89.682 1.00 30.25 C
ATOM 14 N1 C A2002 51.367 140.858 89.877 1.00 32.56 N
ATOM 15 C2 C A2002 50.908 141.060 91.189 1.00 33.89 C
ATOM 16 O2 C A2002 51.650 140.762 92.140 1.00 38.61 O
ATOM 17 N3 C A2002 49.675 141.566 91.388 1.00 33.59 N
ATOM 18 C4 C A2002 48.901 141.861 90.346 1.00 33.90 C
ATOM 19 N4 C A2002 47.684 142.348 90.594 1.00 34.52 N
ATOM 20 C5 C A2002 49.338 141.666 89.003 1.00 33.62 C
ATOM 21 C6 C A2002 50.566 141.166 88.816 1.00 31.95 C
ATOM 22 P U A2003 52.426 136.063 87.241 1.00 30.60 P
ATOM 23 OP1 U A2003 53.322 134.899 87.042 1.00 30.94 O
ATOM 24 OP2 U A2003 51.758 136.679 86.063 1.00 32.36 O
ATOM 25 O5' U A2003 51.292 135.727 88.311 1.00 28.31 O
TER
ATOM 1 O3' A B1326 38.783 144.074 92.275 1.00 30.75 O
ATOM 2 P U B1327 39.619 145.360 92.724 1.00 32.44 P
ATOM 3 OP1 U B1327 39.161 145.731 94.078 1.00 32.20 O
ATOM 4 OP2 U B1327 39.560 146.355 91.630 1.00 30.04 O
ATOM 5 O5' U B1327 41.120 144.851 92.823 1.00 31.46 O
ATOM 6 C5' U B1327 41.486 143.741 93.644 1.00 28.36 C
ATOM 7 C4' U B1327 42.893 143.309 93.308 1.00 30.12 C
ATOM 8 O4' U B1327 42.923 142.799 91.952 1.00 30.57 O
ATOM 9 C3' U B1327 43.930 144.422 93.317 1.00 29.84 C
ATOM 10 O3' U B1327 44.415 144.634 94.635 1.00 29.93 O
ATOM 11 C2' U B1327 44.996 143.875 92.379 1.00 30.20 C
ATOM 12 O2' U B1327 45.805 142.893 92.988 1.00 32.77 O
ATOM 13 C1' U B1327 44.135 143.180 91.324 1.00 31.37 C
ATOM 14 N1 U B1327 43.814 144.033 90.169 1.00 32.79 N
ATOM 15 C2 U B1327 44.603 143.914 89.041 1.00 33.67 C
ATOM 16 O2 U B1327 45.544 143.145 88.967 1.00 36.38 O
ATOM 17 N3 U B1327 44.250 144.728 87.999 1.00 31.77 N
ATOM 18 C4 U B1327 43.211 145.624 87.964 1.00 34.60 C
ATOM 19 O4 U B1327 42.959 146.219 86.914 1.00 38.16 O
ATOM 20 C5 U B1327 42.450 145.699 89.171 1.00 35.89 C
ATOM 21 C6 U B1327 42.769 144.920 90.205 1.00 34.02 C
ATOM 22 P A B1328 45.000 146.067 95.061 1.00 29.38 P
ATOM 23 OP1 A B1328 46.176 146.370 94.235 1.00 32.95 O
ATOM 24 OP2 A B1328 45.125 146.063 96.533 1.00 31.81 O
ATOM 25 O5' A B1328 43.870 147.107 94.655 1.00 30.67 O
TER
ATOM 2 P C A2002 51.355 140.835 84.625 1.00 27.49 P
ATOM 3 OP1 C A2002 52.009 140.070 83.530 1.00 27.09 O
ATOM 4 OP2 C A2002 49.876 140.885 84.703 1.00 29.61 O
ATOM 5 O5' C A2002 51.907 140.317 86.030 1.00 27.47 O
ATOM 6 C5' C A2002 53.274 139.879 86.179 1.00 25.75 C
ATOM 7 C4' C A2002 53.566 139.575 87.624 1.00 27.65 C
ATOM 8 O4' C A2002 53.216 140.732 88.425 1.00 29.51 O
ATOM 9 C3' C A2002 52.736 138.461 88.226 1.00 29.50 C
ATOM 10 O3' C A2002 53.310 137.198 87.945 1.00 30.00 O
ATOM 11 C2' C A2002 52.773 138.786 89.712 1.00 30.32 C
ATOM 12 O2' C A2002 53.960 138.381 90.357 1.00 32.08 O
ATOM 13 C1' C A2002 52.722 140.311 89.682 1.00 30.25 C
ATOM 14 N1 C A2002 51.367 140.858 89.877 1.00 32.56 N
ATOM 15 C2 C A2002 50.908 141.060 91.189 1.00 33.89 C
ATOM 16 O2 C A2002 51.650 140.762 92.140 1.00 38.61 O
ATOM 17 N3 C A2002 49.675 141.566 91.388 1.00 33.59 N
ATOM 18 C4 C A2002 48.901 141.861 90.346 1.00 33.90 C
ATOM 19 N4 C A2002 47.684 142.348 90.594 1.00 34.52 N
ATOM 20 C5 C A2002 49.338 141.666 89.003 1.00 33.62 C
ATOM 21 C6 C A2002 50.566 141.166 88.816 1.00 31.95 C
ATOM 22 P U A2003 52.426 136.063 87.241 1.00 30.60 P
ATOM 23 OP1 U A2003 53.322 134.899 87.042 1.00 30.94 O
ATOM 24 OP2 U A2003 51.758 136.679 86.063 1.00 32.36 O
ATOM 25 O5' U A2003 51.292 135.727 88.311 1.00 28.31 O
TER
ATOM 1 O3' A B1326 38.783 144.074 92.275 1.00 30.75 O
ATOM 2 P U B1327 39.619 145.360 92.724 1.00 32.44 P
ATOM 3 OP1 U B1327 39.161 145.731 94.078 1.00 32.20 O
ATOM 4 OP2 U B1327 39.560 146.355 91.630 1.00 30.04 O
ATOM 5 O5' U B1327 41.120 144.851 92.823 1.00 31.46 O
ATOM 6 C5' U B1327 41.486 143.741 93.644 1.00 28.36 C
ATOM 7 C4' U B1327 42.893 143.309 93.308 1.00 30.12 C
ATOM 8 O4' U B1327 42.923 142.799 91.952 1.00 30.57 O
ATOM 9 C3' U B1327 43.930 144.422 93.317 1.00 29.84 C
ATOM 10 O3' U B1327 44.415 144.634 94.635 1.00 29.93 O
ATOM 11 C2' U B1327 44.996 143.875 92.379 1.00 30.20 C
ATOM 12 O2' U B1327 45.805 142.893 92.988 1.00 32.77 O
ATOM 13 C1' U B1327 44.135 143.180 91.324 1.00 31.37 C
ATOM 14 N1 U B1327 43.814 144.033 90.169 1.00 32.79 N
ATOM 15 C2 U B1327 44.603 143.914 89.041 1.00 33.67 C
ATOM 16 O2 U B1327 45.544 143.145 88.967 1.00 36.38 O
ATOM 17 N3 U B1327 44.250 144.728 87.999 1.00 31.77 N
ATOM 18 C4 U B1327 43.211 145.624 87.964 1.00 34.60 C
ATOM 19 O4 U B1327 42.959 146.219 86.914 1.00 38.16 O
ATOM 20 C5 U B1327 42.450 145.699 89.171 1.00 35.89 C
ATOM 21 C6 U B1327 42.769 144.920 90.205 1.00 34.02 C
ATOM 22 P A B1328 45.000 146.067 95.061 1.00 29.38 P
ATOM 23 OP1 A B1328 46.176 146.370 94.235 1.00 32.95 O
ATOM 24 OP2 A B1328 45.125 146.063 96.533 1.00 31.81 O
ATOM 25 O5' A B1328 43.870 147.107 94.655 1.00 30.67 O
TER
Atoms:
C2: (50.908,141.060,91.189)
OP1: (52.009,140.070,83.530)
OP2: (49.876,140.885,84.703)
C4: (48.901,141.861,90.346)
O5': (51.907,140.317,86.030)
C3': (52.736,138.461,88.226)
C1': (52.722,140.311,89.682)
O4': (53.216,140.732,88.425)
C5': (53.274,139.879,86.179)
P: (51.355,140.835,84.625)
O2: (51.650,140.762,92.140)
C4': (53.566,139.575,87.624)
C2': (52.773,138.786,89.712)
O2': (53.960,138.381,90.357)
N1: (51.367,140.858,89.877)
N3: (49.675,141.566,91.388)
N4: (47.684,142.348,90.594)
C6: (50.566,141.166,88.816)
C5: (49.338,141.666,89.003)
O3': (53.310,137.198,87.945)
OP1: (52.009,140.070,83.530)
OP2: (49.876,140.885,84.703)
C4: (48.901,141.861,90.346)
O5': (51.907,140.317,86.030)
C3': (52.736,138.461,88.226)
C1': (52.722,140.311,89.682)
O4': (53.216,140.732,88.425)
C5': (53.274,139.879,86.179)
P: (51.355,140.835,84.625)
O2: (51.650,140.762,92.140)
C4': (53.566,139.575,87.624)
C2': (52.773,138.786,89.712)
O2': (53.960,138.381,90.357)
N1: (51.367,140.858,89.877)
N3: (49.675,141.566,91.388)
N4: (47.684,142.348,90.594)
C6: (50.566,141.166,88.816)
C5: (49.338,141.666,89.003)
O3': (53.310,137.198,87.945)
C4: (43.211,145.624,87.964)
N3: (44.250,144.728,87.999)
OP1: (39.161,145.731,94.078)
OP2: (39.560,146.355,91.630)
C2: (44.603,143.914,89.041)
C1': (44.135,143.180,91.324)
C3': (43.930,144.422,93.317)
O5': (41.120,144.851,92.823)
O4': (42.923,142.799,91.952)
C5': (41.486,143.741,93.644)
P: (39.619,145.360,92.724)
C4': (42.893,143.309,93.308)
C2': (44.996,143.875,92.379)
O2': (45.805,142.893,92.988)
N1: (43.814,144.033,90.169)
O4: (42.959,146.219,86.914)
O2: (45.544,143.145,88.967)
C6: (42.769,144.920,90.205)
C5: (42.450,145.699,89.171)
O3': (44.415,144.634,94.635)
N3: (44.250,144.728,87.999)
OP1: (39.161,145.731,94.078)
OP2: (39.560,146.355,91.630)
C2: (44.603,143.914,89.041)
C1': (44.135,143.180,91.324)
C3': (43.930,144.422,93.317)
O5': (41.120,144.851,92.823)
O4': (42.923,142.799,91.952)
C5': (41.486,143.741,93.644)
P: (39.619,145.360,92.724)
C4': (42.893,143.309,93.308)
C2': (44.996,143.875,92.379)
O2': (45.805,142.893,92.988)
N1: (43.814,144.033,90.169)
O4: (42.959,146.219,86.914)
O2: (45.544,143.145,88.967)
C6: (42.769,144.920,90.205)
C5: (42.450,145.699,89.171)
O3': (44.415,144.634,94.635)
Image (generated by PyMOL):