Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02237:0904
Extra
PDB:
ATOM 1 O3' A A2236 53.756 76.725 71.422 1.00 37.91 O
ATOM 2 P C A2237 54.982 75.698 71.397 1.00 39.18 P
ATOM 3 OP1 C A2237 55.031 75.096 70.037 1.00 38.91 O
ATOM 4 OP2 C A2237 54.882 74.823 72.596 1.00 38.61 O
ATOM 5 O5' C A2237 56.262 76.622 71.585 1.00 39.16 O
ATOM 6 C5' C A2237 56.712 77.494 70.537 1.00 37.34 C
ATOM 7 C4' C A2237 57.903 78.278 71.012 1.00 37.32 C
ATOM 8 O4' C A2237 57.504 79.124 72.113 1.00 37.02 O
ATOM 9 C3' C A2237 58.989 77.426 71.636 1.00 36.33 C
ATOM 10 O3' C A2237 59.805 76.882 70.621 1.00 36.52 O
ATOM 11 C2' C A2237 59.754 78.440 72.476 1.00 37.53 C
ATOM 12 O2' C A2237 60.695 79.174 71.719 1.00 40.16 O
ATOM 13 C1' C A2237 58.628 79.378 72.927 1.00 37.15 C
ATOM 14 N1 C A2237 58.230 79.262 74.339 1.00 39.73 N
ATOM 15 C2 C A2237 58.918 80.026 75.288 1.00 40.83 C
ATOM 16 O2 C A2237 59.866 80.742 74.913 1.00 41.48 O
ATOM 17 N3 C A2237 58.541 79.962 76.587 1.00 40.43 N
ATOM 18 C4 C A2237 57.535 79.168 76.952 1.00 38.32 C
ATOM 19 N4 C A2237 57.196 79.155 78.240 1.00 36.80 N
ATOM 20 C5 C A2237 56.832 78.358 76.012 1.00 37.12 C
ATOM 21 C6 C A2237 57.208 78.436 74.729 1.00 38.78 C
ATOM 22 P G A2238 60.021 75.297 70.526 1.00 36.92 P
ATOM 23 OP1 G A2238 59.133 74.794 69.449 1.00 36.25 O
ATOM 24 OP2 G A2238 59.942 74.698 71.883 1.00 37.22 O
ATOM 25 O5' G A2238 61.522 75.182 70.004 1.00 37.53 O
TER
ATOM 1 O3' A B 903 57.478 82.366 84.909 1.00 29.50 O
ATOM 2 P U B 904 58.968 82.760 84.481 1.00 29.34 P
ATOM 3 OP1 U B 904 59.860 81.801 85.178 1.00 30.17 O
ATOM 4 OP2 U B 904 59.139 84.224 84.709 1.00 28.67 O
ATOM 5 O5' U B 904 59.004 82.491 82.912 1.00 24.01 O
ATOM 6 C5' U B 904 59.269 81.185 82.404 1.00 25.87 C
ATOM 7 C4' U B 904 59.481 81.227 80.911 1.00 27.08 C
ATOM 8 O4' U B 904 58.263 81.669 80.256 1.00 27.62 O
ATOM 9 C3' U B 904 60.548 82.172 80.386 1.00 26.36 C
ATOM 10 O3' U B 904 61.845 81.603 80.457 1.00 27.24 O
ATOM 11 C2' U B 904 60.107 82.338 78.944 1.00 26.83 C
ATOM 12 O2' U B 904 60.412 81.176 78.200 1.00 22.32 O
ATOM 13 C1' U B 904 58.592 82.449 79.119 1.00 25.81 C
ATOM 14 N1 U B 904 58.171 83.833 79.386 1.00 26.99 N
ATOM 15 C2 U B 904 57.983 84.679 78.304 1.00 27.14 C
ATOM 16 O2 U B 904 58.142 84.329 77.149 1.00 29.17 O
ATOM 17 N3 U B 904 57.608 85.957 78.629 1.00 25.39 N
ATOM 18 C4 U B 904 57.405 86.467 79.889 1.00 26.04 C
ATOM 19 O4 U B 904 57.072 87.639 80.016 1.00 29.85 O
ATOM 20 C5 U B 904 57.611 85.538 80.951 1.00 26.36 C
ATOM 21 C6 U B 904 57.978 84.285 80.672 1.00 26.56 C
ATOM 22 P G B 905 63.132 82.560 80.594 1.00 29.36 P
ATOM 23 OP1 G B 905 64.318 81.679 80.723 1.00 27.87 O
ATOM 24 OP2 G B 905 62.849 83.570 81.641 1.00 26.54 O
ATOM 25 O5' G B 905 63.226 83.313 79.191 1.00 29.03 O
TER
ATOM 2 P C A2237 54.982 75.698 71.397 1.00 39.18 P
ATOM 3 OP1 C A2237 55.031 75.096 70.037 1.00 38.91 O
ATOM 4 OP2 C A2237 54.882 74.823 72.596 1.00 38.61 O
ATOM 5 O5' C A2237 56.262 76.622 71.585 1.00 39.16 O
ATOM 6 C5' C A2237 56.712 77.494 70.537 1.00 37.34 C
ATOM 7 C4' C A2237 57.903 78.278 71.012 1.00 37.32 C
ATOM 8 O4' C A2237 57.504 79.124 72.113 1.00 37.02 O
ATOM 9 C3' C A2237 58.989 77.426 71.636 1.00 36.33 C
ATOM 10 O3' C A2237 59.805 76.882 70.621 1.00 36.52 O
ATOM 11 C2' C A2237 59.754 78.440 72.476 1.00 37.53 C
ATOM 12 O2' C A2237 60.695 79.174 71.719 1.00 40.16 O
ATOM 13 C1' C A2237 58.628 79.378 72.927 1.00 37.15 C
ATOM 14 N1 C A2237 58.230 79.262 74.339 1.00 39.73 N
ATOM 15 C2 C A2237 58.918 80.026 75.288 1.00 40.83 C
ATOM 16 O2 C A2237 59.866 80.742 74.913 1.00 41.48 O
ATOM 17 N3 C A2237 58.541 79.962 76.587 1.00 40.43 N
ATOM 18 C4 C A2237 57.535 79.168 76.952 1.00 38.32 C
ATOM 19 N4 C A2237 57.196 79.155 78.240 1.00 36.80 N
ATOM 20 C5 C A2237 56.832 78.358 76.012 1.00 37.12 C
ATOM 21 C6 C A2237 57.208 78.436 74.729 1.00 38.78 C
ATOM 22 P G A2238 60.021 75.297 70.526 1.00 36.92 P
ATOM 23 OP1 G A2238 59.133 74.794 69.449 1.00 36.25 O
ATOM 24 OP2 G A2238 59.942 74.698 71.883 1.00 37.22 O
ATOM 25 O5' G A2238 61.522 75.182 70.004 1.00 37.53 O
TER
ATOM 1 O3' A B 903 57.478 82.366 84.909 1.00 29.50 O
ATOM 2 P U B 904 58.968 82.760 84.481 1.00 29.34 P
ATOM 3 OP1 U B 904 59.860 81.801 85.178 1.00 30.17 O
ATOM 4 OP2 U B 904 59.139 84.224 84.709 1.00 28.67 O
ATOM 5 O5' U B 904 59.004 82.491 82.912 1.00 24.01 O
ATOM 6 C5' U B 904 59.269 81.185 82.404 1.00 25.87 C
ATOM 7 C4' U B 904 59.481 81.227 80.911 1.00 27.08 C
ATOM 8 O4' U B 904 58.263 81.669 80.256 1.00 27.62 O
ATOM 9 C3' U B 904 60.548 82.172 80.386 1.00 26.36 C
ATOM 10 O3' U B 904 61.845 81.603 80.457 1.00 27.24 O
ATOM 11 C2' U B 904 60.107 82.338 78.944 1.00 26.83 C
ATOM 12 O2' U B 904 60.412 81.176 78.200 1.00 22.32 O
ATOM 13 C1' U B 904 58.592 82.449 79.119 1.00 25.81 C
ATOM 14 N1 U B 904 58.171 83.833 79.386 1.00 26.99 N
ATOM 15 C2 U B 904 57.983 84.679 78.304 1.00 27.14 C
ATOM 16 O2 U B 904 58.142 84.329 77.149 1.00 29.17 O
ATOM 17 N3 U B 904 57.608 85.957 78.629 1.00 25.39 N
ATOM 18 C4 U B 904 57.405 86.467 79.889 1.00 26.04 C
ATOM 19 O4 U B 904 57.072 87.639 80.016 1.00 29.85 O
ATOM 20 C5 U B 904 57.611 85.538 80.951 1.00 26.36 C
ATOM 21 C6 U B 904 57.978 84.285 80.672 1.00 26.56 C
ATOM 22 P G B 905 63.132 82.560 80.594 1.00 29.36 P
ATOM 23 OP1 G B 905 64.318 81.679 80.723 1.00 27.87 O
ATOM 24 OP2 G B 905 62.849 83.570 81.641 1.00 26.54 O
ATOM 25 O5' G B 905 63.226 83.313 79.191 1.00 29.03 O
TER
Atoms:
C2: (58.918,80.026,75.288)
OP1: (55.031,75.096,70.037)
OP2: (54.882,74.823,72.596)
C4: (57.535,79.168,76.952)
O5': (56.262,76.622,71.585)
C3': (58.989,77.426,71.636)
C1': (58.628,79.378,72.927)
O4': (57.504,79.124,72.113)
C5': (56.712,77.494,70.537)
P: (54.982,75.698,71.397)
O2: (59.866,80.742,74.913)
C4': (57.903,78.278,71.012)
C2': (59.754,78.440,72.476)
O2': (60.695,79.174,71.719)
N1: (58.230,79.262,74.339)
N3: (58.541,79.962,76.587)
N4: (57.196,79.155,78.240)
C6: (57.208,78.436,74.729)
C5: (56.832,78.358,76.012)
O3': (59.805,76.882,70.621)
OP1: (55.031,75.096,70.037)
OP2: (54.882,74.823,72.596)
C4: (57.535,79.168,76.952)
O5': (56.262,76.622,71.585)
C3': (58.989,77.426,71.636)
C1': (58.628,79.378,72.927)
O4': (57.504,79.124,72.113)
C5': (56.712,77.494,70.537)
P: (54.982,75.698,71.397)
O2: (59.866,80.742,74.913)
C4': (57.903,78.278,71.012)
C2': (59.754,78.440,72.476)
O2': (60.695,79.174,71.719)
N1: (58.230,79.262,74.339)
N3: (58.541,79.962,76.587)
N4: (57.196,79.155,78.240)
C6: (57.208,78.436,74.729)
C5: (56.832,78.358,76.012)
O3': (59.805,76.882,70.621)
C4: (57.405,86.467,79.889)
N3: (57.608,85.957,78.629)
OP1: (59.860,81.801,85.178)
OP2: (59.139,84.224,84.709)
C2: (57.983,84.679,78.304)
C1': (58.592,82.449,79.119)
C3': (60.548,82.172,80.386)
O5': (59.004,82.491,82.912)
O4': (58.263,81.669,80.256)
C5': (59.269,81.185,82.404)
P: (58.968,82.760,84.481)
C4': (59.481,81.227,80.911)
C2': (60.107,82.338,78.944)
O2': (60.412,81.176,78.200)
N1: (58.171,83.833,79.386)
O4: (57.072,87.639,80.016)
O2: (58.142,84.329,77.149)
C6: (57.978,84.285,80.672)
C5: (57.611,85.538,80.951)
O3': (61.845,81.603,80.457)
N3: (57.608,85.957,78.629)
OP1: (59.860,81.801,85.178)
OP2: (59.139,84.224,84.709)
C2: (57.983,84.679,78.304)
C1': (58.592,82.449,79.119)
C3': (60.548,82.172,80.386)
O5': (59.004,82.491,82.912)
O4': (58.263,81.669,80.256)
C5': (59.269,81.185,82.404)
P: (58.968,82.760,84.481)
C4': (59.481,81.227,80.911)
C2': (60.107,82.338,78.944)
O2': (60.412,81.176,78.200)
N1: (58.171,83.833,79.386)
O4: (57.072,87.639,80.016)
O2: (58.142,84.329,77.149)
C6: (57.978,84.285,80.672)
C5: (57.611,85.538,80.951)
O3': (61.845,81.603,80.457)
Image (generated by PyMOL):