Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02237:0904
Extra
PDB:
ATOM 1 O3' A A2236 53.813 76.558 71.367 1.00 39.27 O
ATOM 2 P C A2237 55.093 75.599 71.311 1.00 40.71 P
ATOM 3 OP1 C A2237 55.172 75.072 69.926 1.00 40.05 O
ATOM 4 OP2 C A2237 55.041 74.660 72.457 1.00 38.96 O
ATOM 5 O5' C A2237 56.314 76.585 71.558 1.00 40.25 O
ATOM 6 C5' C A2237 56.785 77.457 70.524 1.00 38.35 C
ATOM 7 C4' C A2237 57.984 78.219 71.013 1.00 37.70 C
ATOM 8 O4' C A2237 57.590 79.052 72.122 1.00 38.41 O
ATOM 9 C3' C A2237 59.064 77.350 71.623 1.00 37.87 C
ATOM 10 O3' C A2237 59.891 76.846 70.601 1.00 40.22 O
ATOM 11 C2' C A2237 59.832 78.340 72.484 1.00 38.36 C
ATOM 12 O2' C A2237 60.757 79.097 71.735 1.00 40.25 O
ATOM 13 C1' C A2237 58.711 79.270 72.952 1.00 39.00 C
ATOM 14 N1 C A2237 58.306 79.116 74.357 1.00 41.17 N
ATOM 15 C2 C A2237 58.986 79.850 75.325 1.00 43.32 C
ATOM 16 O2 C A2237 59.932 80.576 74.974 1.00 45.72 O
ATOM 17 N3 C A2237 58.603 79.753 76.619 1.00 43.10 N
ATOM 18 C4 C A2237 57.590 78.961 76.955 1.00 40.94 C
ATOM 19 N4 C A2237 57.234 78.924 78.236 1.00 42.67 N
ATOM 20 C5 C A2237 56.893 78.180 75.992 1.00 40.51 C
ATOM 21 C6 C A2237 57.280 78.285 74.716 1.00 40.94 C
ATOM 22 P G A2238 60.091 75.267 70.437 1.00 42.34 P
ATOM 23 OP1 G A2238 59.242 74.838 69.294 1.00 41.39 O
ATOM 24 OP2 G A2238 59.940 74.600 71.755 1.00 42.84 O
ATOM 25 O5' G A2238 61.607 75.166 69.967 1.00 41.54 O
TER
ATOM 1 O3' A B 903 57.482 82.222 84.869 1.00 33.02 O
ATOM 2 P U B 904 58.962 82.677 84.455 1.00 33.78 P
ATOM 3 OP1 U B 904 59.918 81.797 85.174 1.00 33.76 O
ATOM 4 OP2 U B 904 59.035 84.151 84.644 1.00 33.67 O
ATOM 5 O5' U B 904 59.036 82.383 82.891 1.00 29.54 O
ATOM 6 C5' U B 904 59.309 81.068 82.404 1.00 27.38 C
ATOM 7 C4' U B 904 59.523 81.095 80.911 1.00 28.10 C
ATOM 8 O4' U B 904 58.308 81.543 80.258 1.00 27.04 O
ATOM 9 C3' U B 904 60.593 82.033 80.377 1.00 27.48 C
ATOM 10 O3' U B 904 61.890 81.467 80.445 1.00 28.56 O
ATOM 11 C2' U B 904 60.151 82.198 78.935 1.00 27.96 C
ATOM 12 O2' U B 904 60.455 81.047 78.175 1.00 25.40 O
ATOM 13 C1' U B 904 58.637 82.310 79.114 1.00 26.58 C
ATOM 14 N1 U B 904 58.223 83.700 79.366 1.00 26.60 N
ATOM 15 C2 U B 904 58.008 84.518 78.274 1.00 28.98 C
ATOM 16 O2 U B 904 58.121 84.131 77.121 1.00 31.79 O
ATOM 17 N3 U B 904 57.653 85.809 78.581 1.00 27.55 N
ATOM 18 C4 U B 904 57.490 86.346 79.839 1.00 26.97 C
ATOM 19 O4 U B 904 57.188 87.530 79.957 1.00 28.20 O
ATOM 20 C5 U B 904 57.714 85.435 80.907 1.00 25.87 C
ATOM 21 C6 U B 904 58.065 84.177 80.643 1.00 25.27 C
ATOM 22 P G B 905 63.174 82.424 80.588 1.00 32.56 P
ATOM 23 OP1 G B 905 64.341 81.515 80.732 1.00 30.32 O
ATOM 24 OP2 G B 905 62.922 83.462 81.621 1.00 29.87 O
ATOM 25 O5' G B 905 63.270 83.168 79.182 1.00 31.46 O
TER
ATOM 2 P C A2237 55.093 75.599 71.311 1.00 40.71 P
ATOM 3 OP1 C A2237 55.172 75.072 69.926 1.00 40.05 O
ATOM 4 OP2 C A2237 55.041 74.660 72.457 1.00 38.96 O
ATOM 5 O5' C A2237 56.314 76.585 71.558 1.00 40.25 O
ATOM 6 C5' C A2237 56.785 77.457 70.524 1.00 38.35 C
ATOM 7 C4' C A2237 57.984 78.219 71.013 1.00 37.70 C
ATOM 8 O4' C A2237 57.590 79.052 72.122 1.00 38.41 O
ATOM 9 C3' C A2237 59.064 77.350 71.623 1.00 37.87 C
ATOM 10 O3' C A2237 59.891 76.846 70.601 1.00 40.22 O
ATOM 11 C2' C A2237 59.832 78.340 72.484 1.00 38.36 C
ATOM 12 O2' C A2237 60.757 79.097 71.735 1.00 40.25 O
ATOM 13 C1' C A2237 58.711 79.270 72.952 1.00 39.00 C
ATOM 14 N1 C A2237 58.306 79.116 74.357 1.00 41.17 N
ATOM 15 C2 C A2237 58.986 79.850 75.325 1.00 43.32 C
ATOM 16 O2 C A2237 59.932 80.576 74.974 1.00 45.72 O
ATOM 17 N3 C A2237 58.603 79.753 76.619 1.00 43.10 N
ATOM 18 C4 C A2237 57.590 78.961 76.955 1.00 40.94 C
ATOM 19 N4 C A2237 57.234 78.924 78.236 1.00 42.67 N
ATOM 20 C5 C A2237 56.893 78.180 75.992 1.00 40.51 C
ATOM 21 C6 C A2237 57.280 78.285 74.716 1.00 40.94 C
ATOM 22 P G A2238 60.091 75.267 70.437 1.00 42.34 P
ATOM 23 OP1 G A2238 59.242 74.838 69.294 1.00 41.39 O
ATOM 24 OP2 G A2238 59.940 74.600 71.755 1.00 42.84 O
ATOM 25 O5' G A2238 61.607 75.166 69.967 1.00 41.54 O
TER
ATOM 1 O3' A B 903 57.482 82.222 84.869 1.00 33.02 O
ATOM 2 P U B 904 58.962 82.677 84.455 1.00 33.78 P
ATOM 3 OP1 U B 904 59.918 81.797 85.174 1.00 33.76 O
ATOM 4 OP2 U B 904 59.035 84.151 84.644 1.00 33.67 O
ATOM 5 O5' U B 904 59.036 82.383 82.891 1.00 29.54 O
ATOM 6 C5' U B 904 59.309 81.068 82.404 1.00 27.38 C
ATOM 7 C4' U B 904 59.523 81.095 80.911 1.00 28.10 C
ATOM 8 O4' U B 904 58.308 81.543 80.258 1.00 27.04 O
ATOM 9 C3' U B 904 60.593 82.033 80.377 1.00 27.48 C
ATOM 10 O3' U B 904 61.890 81.467 80.445 1.00 28.56 O
ATOM 11 C2' U B 904 60.151 82.198 78.935 1.00 27.96 C
ATOM 12 O2' U B 904 60.455 81.047 78.175 1.00 25.40 O
ATOM 13 C1' U B 904 58.637 82.310 79.114 1.00 26.58 C
ATOM 14 N1 U B 904 58.223 83.700 79.366 1.00 26.60 N
ATOM 15 C2 U B 904 58.008 84.518 78.274 1.00 28.98 C
ATOM 16 O2 U B 904 58.121 84.131 77.121 1.00 31.79 O
ATOM 17 N3 U B 904 57.653 85.809 78.581 1.00 27.55 N
ATOM 18 C4 U B 904 57.490 86.346 79.839 1.00 26.97 C
ATOM 19 O4 U B 904 57.188 87.530 79.957 1.00 28.20 O
ATOM 20 C5 U B 904 57.714 85.435 80.907 1.00 25.87 C
ATOM 21 C6 U B 904 58.065 84.177 80.643 1.00 25.27 C
ATOM 22 P G B 905 63.174 82.424 80.588 1.00 32.56 P
ATOM 23 OP1 G B 905 64.341 81.515 80.732 1.00 30.32 O
ATOM 24 OP2 G B 905 62.922 83.462 81.621 1.00 29.87 O
ATOM 25 O5' G B 905 63.270 83.168 79.182 1.00 31.46 O
TER
Atoms:
C2: (58.986,79.850,75.325)
OP1: (55.172,75.072,69.926)
OP2: (55.041,74.660,72.457)
C4: (57.590,78.961,76.955)
O5': (56.314,76.585,71.558)
C3': (59.064,77.350,71.623)
C1': (58.711,79.270,72.952)
O4': (57.590,79.052,72.122)
C5': (56.785,77.457,70.524)
P: (55.093,75.599,71.311)
O2: (59.932,80.576,74.974)
C4': (57.984,78.219,71.013)
C2': (59.832,78.340,72.484)
O2': (60.757,79.097,71.735)
N1: (58.306,79.116,74.357)
N3: (58.603,79.753,76.619)
N4: (57.234,78.924,78.236)
C6: (57.280,78.285,74.716)
C5: (56.893,78.180,75.992)
O3': (59.891,76.846,70.601)
OP1: (55.172,75.072,69.926)
OP2: (55.041,74.660,72.457)
C4: (57.590,78.961,76.955)
O5': (56.314,76.585,71.558)
C3': (59.064,77.350,71.623)
C1': (58.711,79.270,72.952)
O4': (57.590,79.052,72.122)
C5': (56.785,77.457,70.524)
P: (55.093,75.599,71.311)
O2: (59.932,80.576,74.974)
C4': (57.984,78.219,71.013)
C2': (59.832,78.340,72.484)
O2': (60.757,79.097,71.735)
N1: (58.306,79.116,74.357)
N3: (58.603,79.753,76.619)
N4: (57.234,78.924,78.236)
C6: (57.280,78.285,74.716)
C5: (56.893,78.180,75.992)
O3': (59.891,76.846,70.601)
C4: (57.490,86.346,79.839)
N3: (57.653,85.809,78.581)
OP1: (59.918,81.797,85.174)
OP2: (59.035,84.151,84.644)
C2: (58.008,84.518,78.274)
C1': (58.637,82.310,79.114)
C3': (60.593,82.033,80.377)
O5': (59.036,82.383,82.891)
O4': (58.308,81.543,80.258)
C5': (59.309,81.068,82.404)
P: (58.962,82.677,84.455)
C4': (59.523,81.095,80.911)
C2': (60.151,82.198,78.935)
O2': (60.455,81.047,78.175)
N1: (58.223,83.700,79.366)
O4: (57.188,87.530,79.957)
O2: (58.121,84.131,77.121)
C6: (58.065,84.177,80.643)
C5: (57.714,85.435,80.907)
O3': (61.890,81.467,80.445)
N3: (57.653,85.809,78.581)
OP1: (59.918,81.797,85.174)
OP2: (59.035,84.151,84.644)
C2: (58.008,84.518,78.274)
C1': (58.637,82.310,79.114)
C3': (60.593,82.033,80.377)
O5': (59.036,82.383,82.891)
O4': (58.308,81.543,80.258)
C5': (59.309,81.068,82.404)
P: (58.962,82.677,84.455)
C4': (59.523,81.095,80.911)
C2': (60.151,82.198,78.935)
O2': (60.455,81.047,78.175)
N1: (58.223,83.700,79.366)
O4: (57.188,87.530,79.957)
O2: (58.121,84.131,77.121)
C6: (58.065,84.177,80.643)
C5: (57.714,85.435,80.907)
O3': (61.890,81.467,80.445)
Image (generated by PyMOL):