Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02002:01327
Extra
PDB:
ATOM 1 O3' A A2001 52.414 142.852 84.789 1.00 44.45 O
ATOM 2 P C A2002 51.723 141.403 84.853 1.00 44.03 P
ATOM 3 OP1 C A2002 52.346 140.630 83.756 1.00 43.76 O
ATOM 4 OP2 C A2002 50.251 141.566 84.881 1.00 45.24 O
ATOM 5 O5' C A2002 52.210 140.789 86.246 1.00 43.45 O
ATOM 6 C5' C A2002 53.547 140.259 86.389 1.00 43.71 C
ATOM 7 C4' C A2002 53.825 139.879 87.824 1.00 43.89 C
ATOM 8 O4' C A2002 53.520 141.009 88.678 1.00 45.48 O
ATOM 9 C3' C A2002 52.989 138.755 88.408 1.00 44.55 C
ATOM 10 O3' C A2002 53.519 137.480 88.077 1.00 44.11 O
ATOM 11 C2' C A2002 53.101 139.020 89.901 1.00 45.27 C
ATOM 12 O2' C A2002 54.324 138.584 90.447 1.00 46.61 O
ATOM 13 C1' C A2002 53.065 140.546 89.936 1.00 46.18 C
ATOM 14 N1 C A2002 51.721 141.093 90.199 1.00 48.41 N
ATOM 15 C2 C A2002 51.258 141.114 91.517 1.00 49.96 C
ATOM 16 O2 C A2002 51.981 140.650 92.412 1.00 54.19 O
ATOM 17 N3 C A2002 50.043 141.627 91.786 1.00 48.94 N
ATOM 18 C4 C A2002 49.289 142.097 90.797 1.00 49.17 C
ATOM 19 N4 C A2002 48.089 142.588 91.110 1.00 50.08 N
ATOM 20 C5 C A2002 49.728 142.083 89.443 1.00 48.86 C
ATOM 21 C6 C A2002 50.938 141.576 89.190 1.00 48.34 C
ATOM 22 P U A2003 52.551 136.342 87.489 1.00 44.09 P
ATOM 23 OP1 U A2003 53.386 135.133 87.293 1.00 45.19 O
ATOM 24 OP2 U A2003 51.828 136.918 86.336 1.00 46.27 O
ATOM 25 O5' U A2003 51.465 136.093 88.629 1.00 40.54 O
TER
ATOM 1 O3' A B1326 38.951 144.204 92.555 1.00 41.77 O
ATOM 2 P U B1327 39.780 145.504 92.967 1.00 41.63 P
ATOM 3 OP1 U B1327 39.341 145.878 94.326 1.00 41.92 O
ATOM 4 OP2 U B1327 39.669 146.487 91.865 1.00 41.80 O
ATOM 5 O5' U B1327 41.289 145.000 93.026 1.00 41.77 O
ATOM 6 C5' U B1327 41.696 143.956 93.925 1.00 40.09 C
ATOM 7 C4' U B1327 43.103 143.517 93.606 1.00 41.00 C
ATOM 8 O4' U B1327 43.143 142.984 92.259 1.00 41.78 O
ATOM 9 C3' U B1327 44.159 144.609 93.610 1.00 41.10 C
ATOM 10 O3' U B1327 44.621 144.833 94.941 1.00 43.18 O
ATOM 11 C2' U B1327 45.233 144.016 92.705 1.00 41.37 C
ATOM 12 O2' U B1327 46.032 143.041 93.341 1.00 42.72 O
ATOM 13 C1' U B1327 44.380 143.306 91.653 1.00 41.93 C
ATOM 14 N1 U B1327 44.114 144.150 90.481 1.00 43.28 N
ATOM 15 C2 U B1327 45.035 144.135 89.450 1.00 45.05 C
ATOM 16 O2 U B1327 46.013 143.408 89.437 1.00 47.14 O
ATOM 17 N3 U B1327 44.762 144.998 88.426 1.00 44.73 N
ATOM 18 C4 U B1327 43.678 145.830 88.316 1.00 44.16 C
ATOM 19 O4 U B1327 43.562 146.532 87.318 1.00 47.28 O
ATOM 20 C5 U B1327 42.757 145.763 89.399 1.00 43.93 C
ATOM 21 C6 U B1327 43.000 144.947 90.417 1.00 43.92 C
ATOM 22 P A B1328 45.242 146.255 95.353 1.00 42.10 P
ATOM 23 OP1 A B1328 46.449 146.462 94.531 1.00 43.06 O
ATOM 24 OP2 A B1328 45.350 146.291 96.829 1.00 41.79 O
ATOM 25 O5' A B1328 44.143 147.313 94.895 1.00 43.35 O
TER
ATOM 2 P C A2002 51.723 141.403 84.853 1.00 44.03 P
ATOM 3 OP1 C A2002 52.346 140.630 83.756 1.00 43.76 O
ATOM 4 OP2 C A2002 50.251 141.566 84.881 1.00 45.24 O
ATOM 5 O5' C A2002 52.210 140.789 86.246 1.00 43.45 O
ATOM 6 C5' C A2002 53.547 140.259 86.389 1.00 43.71 C
ATOM 7 C4' C A2002 53.825 139.879 87.824 1.00 43.89 C
ATOM 8 O4' C A2002 53.520 141.009 88.678 1.00 45.48 O
ATOM 9 C3' C A2002 52.989 138.755 88.408 1.00 44.55 C
ATOM 10 O3' C A2002 53.519 137.480 88.077 1.00 44.11 O
ATOM 11 C2' C A2002 53.101 139.020 89.901 1.00 45.27 C
ATOM 12 O2' C A2002 54.324 138.584 90.447 1.00 46.61 O
ATOM 13 C1' C A2002 53.065 140.546 89.936 1.00 46.18 C
ATOM 14 N1 C A2002 51.721 141.093 90.199 1.00 48.41 N
ATOM 15 C2 C A2002 51.258 141.114 91.517 1.00 49.96 C
ATOM 16 O2 C A2002 51.981 140.650 92.412 1.00 54.19 O
ATOM 17 N3 C A2002 50.043 141.627 91.786 1.00 48.94 N
ATOM 18 C4 C A2002 49.289 142.097 90.797 1.00 49.17 C
ATOM 19 N4 C A2002 48.089 142.588 91.110 1.00 50.08 N
ATOM 20 C5 C A2002 49.728 142.083 89.443 1.00 48.86 C
ATOM 21 C6 C A2002 50.938 141.576 89.190 1.00 48.34 C
ATOM 22 P U A2003 52.551 136.342 87.489 1.00 44.09 P
ATOM 23 OP1 U A2003 53.386 135.133 87.293 1.00 45.19 O
ATOM 24 OP2 U A2003 51.828 136.918 86.336 1.00 46.27 O
ATOM 25 O5' U A2003 51.465 136.093 88.629 1.00 40.54 O
TER
ATOM 1 O3' A B1326 38.951 144.204 92.555 1.00 41.77 O
ATOM 2 P U B1327 39.780 145.504 92.967 1.00 41.63 P
ATOM 3 OP1 U B1327 39.341 145.878 94.326 1.00 41.92 O
ATOM 4 OP2 U B1327 39.669 146.487 91.865 1.00 41.80 O
ATOM 5 O5' U B1327 41.289 145.000 93.026 1.00 41.77 O
ATOM 6 C5' U B1327 41.696 143.956 93.925 1.00 40.09 C
ATOM 7 C4' U B1327 43.103 143.517 93.606 1.00 41.00 C
ATOM 8 O4' U B1327 43.143 142.984 92.259 1.00 41.78 O
ATOM 9 C3' U B1327 44.159 144.609 93.610 1.00 41.10 C
ATOM 10 O3' U B1327 44.621 144.833 94.941 1.00 43.18 O
ATOM 11 C2' U B1327 45.233 144.016 92.705 1.00 41.37 C
ATOM 12 O2' U B1327 46.032 143.041 93.341 1.00 42.72 O
ATOM 13 C1' U B1327 44.380 143.306 91.653 1.00 41.93 C
ATOM 14 N1 U B1327 44.114 144.150 90.481 1.00 43.28 N
ATOM 15 C2 U B1327 45.035 144.135 89.450 1.00 45.05 C
ATOM 16 O2 U B1327 46.013 143.408 89.437 1.00 47.14 O
ATOM 17 N3 U B1327 44.762 144.998 88.426 1.00 44.73 N
ATOM 18 C4 U B1327 43.678 145.830 88.316 1.00 44.16 C
ATOM 19 O4 U B1327 43.562 146.532 87.318 1.00 47.28 O
ATOM 20 C5 U B1327 42.757 145.763 89.399 1.00 43.93 C
ATOM 21 C6 U B1327 43.000 144.947 90.417 1.00 43.92 C
ATOM 22 P A B1328 45.242 146.255 95.353 1.00 42.10 P
ATOM 23 OP1 A B1328 46.449 146.462 94.531 1.00 43.06 O
ATOM 24 OP2 A B1328 45.350 146.291 96.829 1.00 41.79 O
ATOM 25 O5' A B1328 44.143 147.313 94.895 1.00 43.35 O
TER
Atoms:
C2: (51.258,141.114,91.517)
OP1: (52.346,140.630,83.756)
OP2: (50.251,141.566,84.881)
C4: (49.289,142.097,90.797)
O5': (52.210,140.789,86.246)
C3': (52.989,138.755,88.408)
C1': (53.065,140.546,89.936)
O4': (53.520,141.009,88.678)
C5': (53.547,140.259,86.389)
P: (51.723,141.403,84.853)
O2: (51.981,140.650,92.412)
C4': (53.825,139.879,87.824)
C2': (53.101,139.020,89.901)
O2': (54.324,138.584,90.447)
N1: (51.721,141.093,90.199)
N3: (50.043,141.627,91.786)
N4: (48.089,142.588,91.110)
C6: (50.938,141.576,89.190)
C5: (49.728,142.083,89.443)
O3': (53.519,137.480,88.077)
OP1: (52.346,140.630,83.756)
OP2: (50.251,141.566,84.881)
C4: (49.289,142.097,90.797)
O5': (52.210,140.789,86.246)
C3': (52.989,138.755,88.408)
C1': (53.065,140.546,89.936)
O4': (53.520,141.009,88.678)
C5': (53.547,140.259,86.389)
P: (51.723,141.403,84.853)
O2: (51.981,140.650,92.412)
C4': (53.825,139.879,87.824)
C2': (53.101,139.020,89.901)
O2': (54.324,138.584,90.447)
N1: (51.721,141.093,90.199)
N3: (50.043,141.627,91.786)
N4: (48.089,142.588,91.110)
C6: (50.938,141.576,89.190)
C5: (49.728,142.083,89.443)
O3': (53.519,137.480,88.077)
C4: (43.678,145.830,88.316)
N3: (44.762,144.998,88.426)
OP1: (39.341,145.878,94.326)
OP2: (39.669,146.487,91.865)
C2: (45.035,144.135,89.450)
C1': (44.380,143.306,91.653)
C3': (44.159,144.609,93.610)
O5': (41.289,145.000,93.026)
O4': (43.143,142.984,92.259)
C5': (41.696,143.956,93.925)
P: (39.780,145.504,92.967)
C4': (43.103,143.517,93.606)
C2': (45.233,144.016,92.705)
O2': (46.032,143.041,93.341)
N1: (44.114,144.150,90.481)
O4: (43.562,146.532,87.318)
O2: (46.013,143.408,89.437)
C6: (43.000,144.947,90.417)
C5: (42.757,145.763,89.399)
O3': (44.621,144.833,94.941)
N3: (44.762,144.998,88.426)
OP1: (39.341,145.878,94.326)
OP2: (39.669,146.487,91.865)
C2: (45.035,144.135,89.450)
C1': (44.380,143.306,91.653)
C3': (44.159,144.609,93.610)
O5': (41.289,145.000,93.026)
O4': (43.143,142.984,92.259)
C5': (41.696,143.956,93.925)
P: (39.780,145.504,92.967)
C4': (43.103,143.517,93.606)
C2': (45.233,144.016,92.705)
O2': (46.032,143.041,93.341)
N1: (44.114,144.150,90.481)
O4: (43.562,146.532,87.318)
O2: (46.013,143.408,89.437)
C6: (43.000,144.947,90.417)
C5: (42.757,145.763,89.399)
O3': (44.621,144.833,94.941)
Image (generated by PyMOL):