Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:01223:0553
Extra
PDB:
ATOM 1 O3' C A1222 7.392 88.891 97.551 1.00 53.71 O
ATOM 2 P U A1223 7.093 89.032 95.985 1.00 54.25 P
ATOM 3 OP1 U A1223 6.268 87.875 95.572 1.00 54.93 O
ATOM 4 OP2 U A1223 8.388 89.260 95.316 1.00 53.69 O
ATOM 5 O5' U A1223 6.231 90.374 95.907 1.00 51.61 O
ATOM 6 C5' U A1223 4.902 90.415 96.443 1.00 51.46 C
ATOM 7 C4' U A1223 4.353 91.824 96.448 1.00 51.99 C
ATOM 8 O4' U A1223 5.133 92.678 97.323 1.00 53.09 O
ATOM 9 C3' U A1223 4.357 92.577 95.137 1.00 51.85 C
ATOM 10 O3' U A1223 3.303 92.178 94.292 1.00 55.02 O
ATOM 11 C2' U A1223 4.196 94.013 95.604 1.00 51.63 C
ATOM 12 O2' U A1223 2.882 94.342 95.973 1.00 49.87 O
ATOM 13 C1' U A1223 5.082 94.015 96.846 1.00 52.38 C
ATOM 14 N1 U A1223 6.442 94.447 96.492 1.00 55.11 N
ATOM 15 C2 U A1223 6.709 95.806 96.525 1.00 55.82 C
ATOM 16 O2 U A1223 5.889 96.636 96.874 1.00 54.86 O
ATOM 17 N3 U A1223 7.974 96.153 96.129 1.00 56.84 N
ATOM 18 C4 U A1223 8.974 95.305 95.715 1.00 55.79 C
ATOM 19 O4 U A1223 10.052 95.778 95.366 1.00 58.90 O
ATOM 20 C5 U A1223 8.632 93.917 95.735 1.00 53.77 C
ATOM 21 C6 U A1223 7.414 93.543 96.115 1.00 52.92 C
ATOM 22 P G A1224 3.445 92.372 92.707 1.00 55.15 P
ATOM 23 OP1 G A1224 2.586 91.338 92.078 1.00 54.50 O
ATOM 24 OP2 G A1224 4.891 92.416 92.374 1.00 58.56 O
ATOM 25 O5' G A1224 2.842 93.824 92.455 1.00 53.85 O
TER
ATOM 1 O3' G B 552 -5.929 94.719 96.586 1.00 67.07 O
ATOM 2 P A B 553 -5.483 93.718 97.762 1.00 67.26 P
ATOM 3 OP1 A B 553 -6.125 92.409 97.492 1.00 66.40 O
ATOM 4 OP2 A B 553 -5.658 94.369 99.091 1.00 64.76 O
ATOM 5 O5' A B 553 -3.927 93.514 97.489 1.00 67.57 O
ATOM 6 C5' A B 553 -3.481 92.839 96.293 1.00 66.81 C
ATOM 7 C4' A B 553 -1.979 92.938 96.148 1.00 65.40 C
ATOM 8 O4' A B 553 -1.583 94.280 95.763 1.00 64.96 O
ATOM 9 C3' A B 553 -1.165 92.668 97.398 1.00 64.17 C
ATOM 10 O3' A B 553 -1.044 91.278 97.644 1.00 63.05 O
ATOM 11 C2' A B 553 0.166 93.313 97.045 1.00 62.48 C
ATOM 12 O2' A B 553 0.896 92.499 96.148 1.00 60.72 O
ATOM 13 C1' A B 553 -0.301 94.565 96.303 1.00 62.00 C
ATOM 14 N9 A B 553 -0.410 95.767 97.130 1.00 60.57 N
ATOM 15 C8 A B 553 -1.546 96.310 97.672 1.00 59.93 C
ATOM 16 N7 A B 553 -1.340 97.431 98.319 1.00 60.47 N
ATOM 17 C5 A B 553 0.026 97.637 98.206 1.00 59.89 C
ATOM 18 C6 A B 553 0.871 98.668 98.664 1.00 61.42 C
ATOM 19 N6 A B 553 0.445 99.728 99.353 1.00 61.40 N
ATOM 20 N1 A B 553 2.187 98.571 98.385 1.00 61.23 N
ATOM 21 C2 A B 553 2.616 97.508 97.692 1.00 61.38 C
ATOM 22 N3 A B 553 1.923 96.483 97.204 1.00 61.08 N
ATOM 23 C4 A B 553 0.616 96.609 97.495 1.00 61.00 C
ATOM 24 P A B 554 -1.171 90.729 99.146 1.00 62.67 P
ATOM 25 OP1 A B 554 -1.340 89.249 99.050 1.00 60.79 O
ATOM 26 OP2 A B 554 -2.189 91.553 99.851 1.00 61.89 O
ATOM 27 O5' A B 554 0.240 91.057 99.819 1.00 64.87 O
TER
ATOM 2 P U A1223 7.093 89.032 95.985 1.00 54.25 P
ATOM 3 OP1 U A1223 6.268 87.875 95.572 1.00 54.93 O
ATOM 4 OP2 U A1223 8.388 89.260 95.316 1.00 53.69 O
ATOM 5 O5' U A1223 6.231 90.374 95.907 1.00 51.61 O
ATOM 6 C5' U A1223 4.902 90.415 96.443 1.00 51.46 C
ATOM 7 C4' U A1223 4.353 91.824 96.448 1.00 51.99 C
ATOM 8 O4' U A1223 5.133 92.678 97.323 1.00 53.09 O
ATOM 9 C3' U A1223 4.357 92.577 95.137 1.00 51.85 C
ATOM 10 O3' U A1223 3.303 92.178 94.292 1.00 55.02 O
ATOM 11 C2' U A1223 4.196 94.013 95.604 1.00 51.63 C
ATOM 12 O2' U A1223 2.882 94.342 95.973 1.00 49.87 O
ATOM 13 C1' U A1223 5.082 94.015 96.846 1.00 52.38 C
ATOM 14 N1 U A1223 6.442 94.447 96.492 1.00 55.11 N
ATOM 15 C2 U A1223 6.709 95.806 96.525 1.00 55.82 C
ATOM 16 O2 U A1223 5.889 96.636 96.874 1.00 54.86 O
ATOM 17 N3 U A1223 7.974 96.153 96.129 1.00 56.84 N
ATOM 18 C4 U A1223 8.974 95.305 95.715 1.00 55.79 C
ATOM 19 O4 U A1223 10.052 95.778 95.366 1.00 58.90 O
ATOM 20 C5 U A1223 8.632 93.917 95.735 1.00 53.77 C
ATOM 21 C6 U A1223 7.414 93.543 96.115 1.00 52.92 C
ATOM 22 P G A1224 3.445 92.372 92.707 1.00 55.15 P
ATOM 23 OP1 G A1224 2.586 91.338 92.078 1.00 54.50 O
ATOM 24 OP2 G A1224 4.891 92.416 92.374 1.00 58.56 O
ATOM 25 O5' G A1224 2.842 93.824 92.455 1.00 53.85 O
TER
ATOM 1 O3' G B 552 -5.929 94.719 96.586 1.00 67.07 O
ATOM 2 P A B 553 -5.483 93.718 97.762 1.00 67.26 P
ATOM 3 OP1 A B 553 -6.125 92.409 97.492 1.00 66.40 O
ATOM 4 OP2 A B 553 -5.658 94.369 99.091 1.00 64.76 O
ATOM 5 O5' A B 553 -3.927 93.514 97.489 1.00 67.57 O
ATOM 6 C5' A B 553 -3.481 92.839 96.293 1.00 66.81 C
ATOM 7 C4' A B 553 -1.979 92.938 96.148 1.00 65.40 C
ATOM 8 O4' A B 553 -1.583 94.280 95.763 1.00 64.96 O
ATOM 9 C3' A B 553 -1.165 92.668 97.398 1.00 64.17 C
ATOM 10 O3' A B 553 -1.044 91.278 97.644 1.00 63.05 O
ATOM 11 C2' A B 553 0.166 93.313 97.045 1.00 62.48 C
ATOM 12 O2' A B 553 0.896 92.499 96.148 1.00 60.72 O
ATOM 13 C1' A B 553 -0.301 94.565 96.303 1.00 62.00 C
ATOM 14 N9 A B 553 -0.410 95.767 97.130 1.00 60.57 N
ATOM 15 C8 A B 553 -1.546 96.310 97.672 1.00 59.93 C
ATOM 16 N7 A B 553 -1.340 97.431 98.319 1.00 60.47 N
ATOM 17 C5 A B 553 0.026 97.637 98.206 1.00 59.89 C
ATOM 18 C6 A B 553 0.871 98.668 98.664 1.00 61.42 C
ATOM 19 N6 A B 553 0.445 99.728 99.353 1.00 61.40 N
ATOM 20 N1 A B 553 2.187 98.571 98.385 1.00 61.23 N
ATOM 21 C2 A B 553 2.616 97.508 97.692 1.00 61.38 C
ATOM 22 N3 A B 553 1.923 96.483 97.204 1.00 61.08 N
ATOM 23 C4 A B 553 0.616 96.609 97.495 1.00 61.00 C
ATOM 24 P A B 554 -1.171 90.729 99.146 1.00 62.67 P
ATOM 25 OP1 A B 554 -1.340 89.249 99.050 1.00 60.79 O
ATOM 26 OP2 A B 554 -2.189 91.553 99.851 1.00 61.89 O
ATOM 27 O5' A B 554 0.240 91.057 99.819 1.00 64.87 O
TER
Atoms:
C4: (8.974,95.305,95.715)
N3: (7.974,96.153,96.129)
OP1: (6.268,87.875,95.572)
OP2: (8.388,89.260,95.316)
C2: (6.709,95.806,96.525)
C1': (5.082,94.015,96.846)
C3': (4.357,92.577,95.137)
O5': (6.231,90.374,95.907)
O4': (5.133,92.678,97.323)
C5': (4.902,90.415,96.443)
P: (7.093,89.032,95.985)
C4': (4.353,91.824,96.448)
C2': (4.196,94.013,95.604)
O2': (2.882,94.342,95.973)
N1: (6.442,94.447,96.492)
O4: (10.052,95.778,95.366)
O2: (5.889,96.636,96.874)
C6: (7.414,93.543,96.115)
C5: (8.632,93.917,95.735)
O3': (3.303,92.178,94.292)
N3: (7.974,96.153,96.129)
OP1: (6.268,87.875,95.572)
OP2: (8.388,89.260,95.316)
C2: (6.709,95.806,96.525)
C1': (5.082,94.015,96.846)
C3': (4.357,92.577,95.137)
O5': (6.231,90.374,95.907)
O4': (5.133,92.678,97.323)
C5': (4.902,90.415,96.443)
P: (7.093,89.032,95.985)
C4': (4.353,91.824,96.448)
C2': (4.196,94.013,95.604)
O2': (2.882,94.342,95.973)
N1: (6.442,94.447,96.492)
O4: (10.052,95.778,95.366)
O2: (5.889,96.636,96.874)
C6: (7.414,93.543,96.115)
C5: (8.632,93.917,95.735)
O3': (3.303,92.178,94.292)
OP1: (-6.125,92.409,97.492)
OP2: (-5.658,94.369,99.091)
C3': (-1.165,92.668,97.398)
C1': (-0.301,94.565,96.303)
C5': (-3.481,92.839,96.293)
O4': (-1.583,94.280,95.763)
C8: (-1.546,96.310,97.672)
O2': (0.896,92.499,96.148)
C6: (0.871,98.668,98.664)
C5: (0.026,97.637,98.206)
C4: (0.616,96.609,97.495)
P: (-5.483,93.718,97.762)
C4': (-1.979,92.938,96.148)
C2': (0.166,93.313,97.045)
C2: (2.616,97.508,97.692)
N1: (2.187,98.571,98.385)
N3: (1.923,96.483,97.204)
N6: (0.445,99.728,99.353)
N7: (-1.340,97.431,98.319)
N9: (-0.410,95.767,97.130)
O5': (-3.927,93.514,97.489)
O3': (-1.044,91.278,97.644)
OP2: (-5.658,94.369,99.091)
C3': (-1.165,92.668,97.398)
C1': (-0.301,94.565,96.303)
C5': (-3.481,92.839,96.293)
O4': (-1.583,94.280,95.763)
C8: (-1.546,96.310,97.672)
O2': (0.896,92.499,96.148)
C6: (0.871,98.668,98.664)
C5: (0.026,97.637,98.206)
C4: (0.616,96.609,97.495)
P: (-5.483,93.718,97.762)
C4': (-1.979,92.938,96.148)
C2': (0.166,93.313,97.045)
C2: (2.616,97.508,97.692)
N1: (2.187,98.571,98.385)
N3: (1.923,96.483,97.204)
N6: (0.445,99.728,99.353)
N7: (-1.340,97.431,98.319)
N9: (-0.410,95.767,97.130)
O5': (-3.927,93.514,97.489)
O3': (-1.044,91.278,97.644)
Image (generated by PyMOL):