Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1223:A553
Extra
PDB:
ATOM 1 O3' C A1222 7.928 89.089 98.130 1.00 33.52 O
ATOM 2 P U A1223 7.639 89.336 96.586 1.00 33.35 P
ATOM 3 OP1 U A1223 6.822 88.193 96.199 1.00 36.14 O
ATOM 4 OP2 U A1223 8.886 89.602 95.859 1.00 32.52 O
ATOM 5 O5' U A1223 6.756 90.655 96.589 1.00 30.25 O
ATOM 6 C5' U A1223 5.447 90.639 97.142 1.00 31.59 C
ATOM 7 C4' U A1223 4.839 92.013 97.099 1.00 34.30 C
ATOM 8 O4' U A1223 5.603 92.898 97.942 1.00 33.96 O
ATOM 9 C3' U A1223 4.856 92.722 95.759 1.00 35.33 C
ATOM 10 O3' U A1223 3.823 92.276 94.893 1.00 37.88 O
ATOM 11 C2' U A1223 4.693 94.176 96.167 1.00 34.15 C
ATOM 12 O2' U A1223 3.377 94.512 96.535 1.00 33.11 O
ATOM 13 C1' U A1223 5.563 94.211 97.413 1.00 34.34 C
ATOM 14 N1 U A1223 6.926 94.632 97.079 1.00 36.12 N
ATOM 15 C2 U A1223 7.167 95.981 97.090 1.00 36.62 C
ATOM 16 O2 U A1223 6.311 96.799 97.369 1.00 35.76 O
ATOM 17 N3 U A1223 8.439 96.341 96.749 1.00 36.30 N
ATOM 18 C4 U A1223 9.466 95.509 96.384 1.00 36.38 C
ATOM 19 O4 U A1223 10.468 96.007 95.879 1.00 37.05 O
ATOM 20 C5 U A1223 9.146 94.115 96.416 1.00 36.41 C
ATOM 21 C6 U A1223 7.917 93.735 96.754 1.00 35.92 C
ATOM 22 P G A1224 3.951 92.524 93.316 1.00 39.54 P
ATOM 23 OP1 G A1224 3.002 91.568 92.705 1.00 39.18 O
ATOM 24 OP2 G A1224 5.378 92.482 92.927 1.00 39.71 O
ATOM 25 O5' G A1224 3.381 93.994 93.113 1.00 36.48 O
TER
ATOM 1 O3' G B 552 -5.403 94.842 97.126 1.00 51.80 O
ATOM 2 P A B 553 -4.903 93.895 98.328 1.00 48.12 P
ATOM 3 OP1 A B 553 -5.505 92.569 98.128 1.00 46.06 O
ATOM 4 OP2 A B 553 -4.995 94.553 99.648 1.00 48.48 O
ATOM 5 O5' A B 553 -3.366 93.720 98.006 1.00 48.76 O
ATOM 6 C5' A B 553 -2.942 92.917 96.900 1.00 50.56 C
ATOM 7 C4' A B 553 -1.446 92.995 96.771 1.00 50.37 C
ATOM 8 O4' A B 553 -1.068 94.341 96.378 1.00 50.15 O
ATOM 9 C3' A B 553 -0.690 92.775 98.076 1.00 49.27 C
ATOM 10 O3' A B 553 -0.537 91.386 98.324 1.00 50.08 O
ATOM 11 C2' A B 553 0.638 93.448 97.776 1.00 48.28 C
ATOM 12 O2' A B 553 1.447 92.648 96.942 1.00 46.89 O
ATOM 13 C1' A B 553 0.177 94.664 96.974 1.00 48.63 C
ATOM 14 N9 A B 553 0.028 95.886 97.762 1.00 47.76 N
ATOM 15 C8 A B 553 -1.115 96.474 98.235 1.00 47.91 C
ATOM 16 N7 A B 553 -0.906 97.621 98.834 1.00 47.95 N
ATOM 17 C5 A B 553 0.471 97.792 98.762 1.00 47.71 C
ATOM 18 C6 A B 553 1.331 98.831 99.179 1.00 47.49 C
ATOM 19 N6 A B 553 0.915 99.974 99.729 1.00 47.06 N
ATOM 20 N1 A B 553 2.652 98.664 98.984 1.00 46.33 N
ATOM 21 C2 A B 553 3.073 97.548 98.379 1.00 45.89 C
ATOM 22 N3 A B 553 2.370 96.528 97.913 1.00 47.02 N
ATOM 23 C4 A B 553 1.060 96.713 98.137 1.00 47.89 C
ATOM 24 P A B 554 -0.621 90.808 99.826 1.00 50.70 P
ATOM 25 OP1 A B 554 -0.680 89.325 99.646 1.00 48.69 O
ATOM 26 OP2 A B 554 -1.664 91.505 100.622 1.00 50.43 O
ATOM 27 O5' A B 554 0.777 91.168 100.497 1.00 49.49 O
TER
ATOM 2 P U A1223 7.639 89.336 96.586 1.00 33.35 P
ATOM 3 OP1 U A1223 6.822 88.193 96.199 1.00 36.14 O
ATOM 4 OP2 U A1223 8.886 89.602 95.859 1.00 32.52 O
ATOM 5 O5' U A1223 6.756 90.655 96.589 1.00 30.25 O
ATOM 6 C5' U A1223 5.447 90.639 97.142 1.00 31.59 C
ATOM 7 C4' U A1223 4.839 92.013 97.099 1.00 34.30 C
ATOM 8 O4' U A1223 5.603 92.898 97.942 1.00 33.96 O
ATOM 9 C3' U A1223 4.856 92.722 95.759 1.00 35.33 C
ATOM 10 O3' U A1223 3.823 92.276 94.893 1.00 37.88 O
ATOM 11 C2' U A1223 4.693 94.176 96.167 1.00 34.15 C
ATOM 12 O2' U A1223 3.377 94.512 96.535 1.00 33.11 O
ATOM 13 C1' U A1223 5.563 94.211 97.413 1.00 34.34 C
ATOM 14 N1 U A1223 6.926 94.632 97.079 1.00 36.12 N
ATOM 15 C2 U A1223 7.167 95.981 97.090 1.00 36.62 C
ATOM 16 O2 U A1223 6.311 96.799 97.369 1.00 35.76 O
ATOM 17 N3 U A1223 8.439 96.341 96.749 1.00 36.30 N
ATOM 18 C4 U A1223 9.466 95.509 96.384 1.00 36.38 C
ATOM 19 O4 U A1223 10.468 96.007 95.879 1.00 37.05 O
ATOM 20 C5 U A1223 9.146 94.115 96.416 1.00 36.41 C
ATOM 21 C6 U A1223 7.917 93.735 96.754 1.00 35.92 C
ATOM 22 P G A1224 3.951 92.524 93.316 1.00 39.54 P
ATOM 23 OP1 G A1224 3.002 91.568 92.705 1.00 39.18 O
ATOM 24 OP2 G A1224 5.378 92.482 92.927 1.00 39.71 O
ATOM 25 O5' G A1224 3.381 93.994 93.113 1.00 36.48 O
TER
ATOM 1 O3' G B 552 -5.403 94.842 97.126 1.00 51.80 O
ATOM 2 P A B 553 -4.903 93.895 98.328 1.00 48.12 P
ATOM 3 OP1 A B 553 -5.505 92.569 98.128 1.00 46.06 O
ATOM 4 OP2 A B 553 -4.995 94.553 99.648 1.00 48.48 O
ATOM 5 O5' A B 553 -3.366 93.720 98.006 1.00 48.76 O
ATOM 6 C5' A B 553 -2.942 92.917 96.900 1.00 50.56 C
ATOM 7 C4' A B 553 -1.446 92.995 96.771 1.00 50.37 C
ATOM 8 O4' A B 553 -1.068 94.341 96.378 1.00 50.15 O
ATOM 9 C3' A B 553 -0.690 92.775 98.076 1.00 49.27 C
ATOM 10 O3' A B 553 -0.537 91.386 98.324 1.00 50.08 O
ATOM 11 C2' A B 553 0.638 93.448 97.776 1.00 48.28 C
ATOM 12 O2' A B 553 1.447 92.648 96.942 1.00 46.89 O
ATOM 13 C1' A B 553 0.177 94.664 96.974 1.00 48.63 C
ATOM 14 N9 A B 553 0.028 95.886 97.762 1.00 47.76 N
ATOM 15 C8 A B 553 -1.115 96.474 98.235 1.00 47.91 C
ATOM 16 N7 A B 553 -0.906 97.621 98.834 1.00 47.95 N
ATOM 17 C5 A B 553 0.471 97.792 98.762 1.00 47.71 C
ATOM 18 C6 A B 553 1.331 98.831 99.179 1.00 47.49 C
ATOM 19 N6 A B 553 0.915 99.974 99.729 1.00 47.06 N
ATOM 20 N1 A B 553 2.652 98.664 98.984 1.00 46.33 N
ATOM 21 C2 A B 553 3.073 97.548 98.379 1.00 45.89 C
ATOM 22 N3 A B 553 2.370 96.528 97.913 1.00 47.02 N
ATOM 23 C4 A B 553 1.060 96.713 98.137 1.00 47.89 C
ATOM 24 P A B 554 -0.621 90.808 99.826 1.00 50.70 P
ATOM 25 OP1 A B 554 -0.680 89.325 99.646 1.00 48.69 O
ATOM 26 OP2 A B 554 -1.664 91.505 100.622 1.00 50.43 O
ATOM 27 O5' A B 554 0.777 91.168 100.497 1.00 49.49 O
TER
Atoms:
C4: (9.466,95.509,96.384)
N3: (8.439,96.341,96.749)
OP1: (6.822,88.193,96.199)
OP2: (8.886,89.602,95.859)
C2: (7.167,95.981,97.090)
C1': (5.563,94.211,97.413)
C3': (4.856,92.722,95.759)
O5': (6.756,90.655,96.589)
O4': (5.603,92.898,97.942)
C5': (5.447,90.639,97.142)
P: (7.639,89.336,96.586)
C4': (4.839,92.013,97.099)
C2': (4.693,94.176,96.167)
O2': (3.377,94.512,96.535)
N1: (6.926,94.632,97.079)
O4: (10.468,96.007,95.879)
O2: (6.311,96.799,97.369)
C6: (7.917,93.735,96.754)
C5: (9.146,94.115,96.416)
O3': (3.823,92.276,94.893)
N3: (8.439,96.341,96.749)
OP1: (6.822,88.193,96.199)
OP2: (8.886,89.602,95.859)
C2: (7.167,95.981,97.090)
C1': (5.563,94.211,97.413)
C3': (4.856,92.722,95.759)
O5': (6.756,90.655,96.589)
O4': (5.603,92.898,97.942)
C5': (5.447,90.639,97.142)
P: (7.639,89.336,96.586)
C4': (4.839,92.013,97.099)
C2': (4.693,94.176,96.167)
O2': (3.377,94.512,96.535)
N1: (6.926,94.632,97.079)
O4: (10.468,96.007,95.879)
O2: (6.311,96.799,97.369)
C6: (7.917,93.735,96.754)
C5: (9.146,94.115,96.416)
O3': (3.823,92.276,94.893)
OP1: (-5.505,92.569,98.128)
OP2: (-4.995,94.553,99.648)
C3': (-0.690,92.775,98.076)
C1': (0.177,94.664,96.974)
C5': (-2.942,92.917,96.900)
O4': (-1.068,94.341,96.378)
C8: (-1.115,96.474,98.235)
O2': (1.447,92.648,96.942)
C6: (1.331,98.831,99.179)
C5: (0.471,97.792,98.762)
C4: (1.060,96.713,98.137)
P: (-4.903,93.895,98.328)
C4': (-1.446,92.995,96.771)
C2': (0.638,93.448,97.776)
C2: (3.073,97.548,98.379)
N1: (2.652,98.664,98.984)
N3: (2.370,96.528,97.913)
N6: (0.915,99.974,99.729)
N7: (-0.906,97.621,98.834)
N9: (0.028,95.886,97.762)
O5': (-3.366,93.720,98.006)
O3': (-0.537,91.386,98.324)
OP2: (-4.995,94.553,99.648)
C3': (-0.690,92.775,98.076)
C1': (0.177,94.664,96.974)
C5': (-2.942,92.917,96.900)
O4': (-1.068,94.341,96.378)
C8: (-1.115,96.474,98.235)
O2': (1.447,92.648,96.942)
C6: (1.331,98.831,99.179)
C5: (0.471,97.792,98.762)
C4: (1.060,96.713,98.137)
P: (-4.903,93.895,98.328)
C4': (-1.446,92.995,96.771)
C2': (0.638,93.448,97.776)
C2: (3.073,97.548,98.379)
N1: (2.652,98.664,98.984)
N3: (2.370,96.528,97.913)
N6: (0.915,99.974,99.729)
N7: (-0.906,97.621,98.834)
N9: (0.028,95.886,97.762)
O5': (-3.366,93.720,98.006)
O3': (-0.537,91.386,98.324)
Image (generated by PyMOL):