Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B26:B57
Extra
PDB:
ATOM 1 O3' C A 25 61.222 12.170 95.971 1.00 88.65 O
ATOM 2 P C A 26 62.772 12.784 96.067 1.00 83.17 P
ATOM 3 OP1 C A 26 63.046 13.631 94.929 1.00 82.83 O
ATOM 4 OP2 C A 26 63.595 11.658 96.376 1.00 83.95 O
ATOM 5 O5' C A 26 62.954 13.823 97.226 1.00 81.84 O
ATOM 6 C5' C A 26 62.268 15.019 97.213 1.00 79.95 C
ATOM 7 C4' C A 26 62.653 15.896 98.370 1.00 78.20 C
ATOM 8 O4' C A 26 62.059 15.372 99.566 1.00 78.86 O
ATOM 9 C3' C A 26 64.129 15.948 98.670 1.00 76.52 C
ATOM 10 O3' C A 26 64.814 16.873 97.839 1.00 72.94 O
ATOM 11 C2' C A 26 64.143 16.376 100.125 1.00 77.21 C
ATOM 12 O2' C A 26 63.924 17.764 100.253 1.00 77.06 O
ATOM 13 C1' C A 26 62.928 15.622 100.667 1.00 78.75 C
ATOM 14 N1 C A 26 63.293 14.342 101.298 1.00 80.47 N
ATOM 15 C2 C A 26 63.779 14.359 102.613 1.00 81.41 C
ATOM 16 O2 C A 26 63.920 15.456 103.193 1.00 81.54 O
ATOM 17 N3 C A 26 64.086 13.195 103.213 1.00 82.40 N
ATOM 18 C4 C A 26 63.948 12.044 102.552 1.00 82.82 C
ATOM 19 N4 C A 26 64.269 10.921 103.204 1.00 83.74 N
ATOM 20 C5 C A 26 63.476 11.995 101.200 1.00 81.82 C
ATOM 21 C6 C A 26 63.159 13.157 100.622 1.00 80.97 C
ATOM 22 P U A 27 66.411 16.801 97.722 1.00 71.00 P
ATOM 23 OP1 U A 27 66.821 17.662 96.579 1.00 69.73 O
ATOM 24 OP2 U A 27 66.759 15.379 97.712 1.00 72.84 O
ATOM 25 O5' U A 27 66.907 17.416 99.104 1.00 70.52 O
TER
ATOM 1 O3' A B 56 68.535 21.150 112.516 1.00 73.77 O
ATOM 2 P G B 57 67.047 21.656 112.158 1.00 72.98 P
ATOM 3 OP1 G B 57 66.821 22.930 112.883 1.00 72.96 O
ATOM 4 OP2 G B 57 66.129 20.510 112.385 1.00 73.58 O
ATOM 5 O5' G B 57 67.054 21.949 110.592 1.00 71.31 O
ATOM 6 C5' G B 57 67.925 22.930 110.010 1.00 69.98 C
ATOM 7 C4' G B 57 67.976 22.736 108.516 1.00 69.53 C
ATOM 8 O4' G B 57 68.463 21.391 108.246 1.00 69.44 O
ATOM 9 C3' G B 57 66.634 22.789 107.795 1.00 69.76 C
ATOM 10 O3' G B 57 66.184 24.106 107.477 1.00 69.98 O
ATOM 11 C2' G B 57 66.918 21.982 106.538 1.00 69.74 C
ATOM 12 O2' G B 57 67.608 22.732 105.565 1.00 68.45 O
ATOM 13 C1' G B 57 67.816 20.871 107.091 1.00 69.61 C
ATOM 14 N9 G B 57 67.060 19.677 107.467 1.00 69.34 N
ATOM 15 C8 G B 57 66.914 19.146 108.725 1.00 70.03 C
ATOM 16 N7 G B 57 66.179 18.068 108.745 1.00 70.56 N
ATOM 17 C5 G B 57 65.817 17.874 107.418 1.00 70.21 C
ATOM 18 C6 G B 57 65.027 16.856 106.813 1.00 70.69 C
ATOM 19 O6 G B 57 64.465 15.891 107.348 1.00 71.61 O
ATOM 20 N1 G B 57 64.922 17.042 105.439 1.00 69.60 N
ATOM 21 C2 G B 57 65.496 18.068 104.733 1.00 68.83 C
ATOM 22 N2 G B 57 65.288 18.062 103.404 1.00 69.13 N
ATOM 23 N3 G B 57 66.223 19.022 105.283 1.00 68.75 N
ATOM 24 C4 G B 57 66.348 18.861 106.618 1.00 69.08 C
ATOM 25 P C B 58 64.674 24.542 107.833 1.00 69.96 P
ATOM 26 OP1 C B 58 64.418 25.891 107.279 1.00 70.45 O
ATOM 27 OP2 C B 58 64.542 24.314 109.295 1.00 71.97 O
ATOM 28 O5' C B 58 63.765 23.524 107.014 1.00 68.54 O
TER
ATOM 2 P C A 26 62.772 12.784 96.067 1.00 83.17 P
ATOM 3 OP1 C A 26 63.046 13.631 94.929 1.00 82.83 O
ATOM 4 OP2 C A 26 63.595 11.658 96.376 1.00 83.95 O
ATOM 5 O5' C A 26 62.954 13.823 97.226 1.00 81.84 O
ATOM 6 C5' C A 26 62.268 15.019 97.213 1.00 79.95 C
ATOM 7 C4' C A 26 62.653 15.896 98.370 1.00 78.20 C
ATOM 8 O4' C A 26 62.059 15.372 99.566 1.00 78.86 O
ATOM 9 C3' C A 26 64.129 15.948 98.670 1.00 76.52 C
ATOM 10 O3' C A 26 64.814 16.873 97.839 1.00 72.94 O
ATOM 11 C2' C A 26 64.143 16.376 100.125 1.00 77.21 C
ATOM 12 O2' C A 26 63.924 17.764 100.253 1.00 77.06 O
ATOM 13 C1' C A 26 62.928 15.622 100.667 1.00 78.75 C
ATOM 14 N1 C A 26 63.293 14.342 101.298 1.00 80.47 N
ATOM 15 C2 C A 26 63.779 14.359 102.613 1.00 81.41 C
ATOM 16 O2 C A 26 63.920 15.456 103.193 1.00 81.54 O
ATOM 17 N3 C A 26 64.086 13.195 103.213 1.00 82.40 N
ATOM 18 C4 C A 26 63.948 12.044 102.552 1.00 82.82 C
ATOM 19 N4 C A 26 64.269 10.921 103.204 1.00 83.74 N
ATOM 20 C5 C A 26 63.476 11.995 101.200 1.00 81.82 C
ATOM 21 C6 C A 26 63.159 13.157 100.622 1.00 80.97 C
ATOM 22 P U A 27 66.411 16.801 97.722 1.00 71.00 P
ATOM 23 OP1 U A 27 66.821 17.662 96.579 1.00 69.73 O
ATOM 24 OP2 U A 27 66.759 15.379 97.712 1.00 72.84 O
ATOM 25 O5' U A 27 66.907 17.416 99.104 1.00 70.52 O
TER
ATOM 1 O3' A B 56 68.535 21.150 112.516 1.00 73.77 O
ATOM 2 P G B 57 67.047 21.656 112.158 1.00 72.98 P
ATOM 3 OP1 G B 57 66.821 22.930 112.883 1.00 72.96 O
ATOM 4 OP2 G B 57 66.129 20.510 112.385 1.00 73.58 O
ATOM 5 O5' G B 57 67.054 21.949 110.592 1.00 71.31 O
ATOM 6 C5' G B 57 67.925 22.930 110.010 1.00 69.98 C
ATOM 7 C4' G B 57 67.976 22.736 108.516 1.00 69.53 C
ATOM 8 O4' G B 57 68.463 21.391 108.246 1.00 69.44 O
ATOM 9 C3' G B 57 66.634 22.789 107.795 1.00 69.76 C
ATOM 10 O3' G B 57 66.184 24.106 107.477 1.00 69.98 O
ATOM 11 C2' G B 57 66.918 21.982 106.538 1.00 69.74 C
ATOM 12 O2' G B 57 67.608 22.732 105.565 1.00 68.45 O
ATOM 13 C1' G B 57 67.816 20.871 107.091 1.00 69.61 C
ATOM 14 N9 G B 57 67.060 19.677 107.467 1.00 69.34 N
ATOM 15 C8 G B 57 66.914 19.146 108.725 1.00 70.03 C
ATOM 16 N7 G B 57 66.179 18.068 108.745 1.00 70.56 N
ATOM 17 C5 G B 57 65.817 17.874 107.418 1.00 70.21 C
ATOM 18 C6 G B 57 65.027 16.856 106.813 1.00 70.69 C
ATOM 19 O6 G B 57 64.465 15.891 107.348 1.00 71.61 O
ATOM 20 N1 G B 57 64.922 17.042 105.439 1.00 69.60 N
ATOM 21 C2 G B 57 65.496 18.068 104.733 1.00 68.83 C
ATOM 22 N2 G B 57 65.288 18.062 103.404 1.00 69.13 N
ATOM 23 N3 G B 57 66.223 19.022 105.283 1.00 68.75 N
ATOM 24 C4 G B 57 66.348 18.861 106.618 1.00 69.08 C
ATOM 25 P C B 58 64.674 24.542 107.833 1.00 69.96 P
ATOM 26 OP1 C B 58 64.418 25.891 107.279 1.00 70.45 O
ATOM 27 OP2 C B 58 64.542 24.314 109.295 1.00 71.97 O
ATOM 28 O5' C B 58 63.765 23.524 107.014 1.00 68.54 O
TER
Atoms:
C2: (63.779,14.359,102.613)
OP1: (63.046,13.631,94.929)
OP2: (63.595,11.658,96.376)
C4: (63.948,12.044,102.552)
O5': (62.954,13.823,97.226)
C3': (64.129,15.948,98.670)
C1': (62.928,15.622,100.667)
O4': (62.059,15.372,99.566)
C5': (62.268,15.019,97.213)
P: (62.772,12.784,96.067)
O2: (63.920,15.456,103.193)
C4': (62.653,15.896,98.370)
C2': (64.143,16.376,100.125)
O2': (63.924,17.764,100.253)
N1: (63.293,14.342,101.298)
N3: (64.086,13.195,103.213)
N4: (64.269,10.921,103.204)
C6: (63.159,13.157,100.622)
C5: (63.476,11.995,101.200)
O3': (64.814,16.873,97.839)
OP1: (63.046,13.631,94.929)
OP2: (63.595,11.658,96.376)
C4: (63.948,12.044,102.552)
O5': (62.954,13.823,97.226)
C3': (64.129,15.948,98.670)
C1': (62.928,15.622,100.667)
O4': (62.059,15.372,99.566)
C5': (62.268,15.019,97.213)
P: (62.772,12.784,96.067)
O2: (63.920,15.456,103.193)
C4': (62.653,15.896,98.370)
C2': (64.143,16.376,100.125)
O2': (63.924,17.764,100.253)
N1: (63.293,14.342,101.298)
N3: (64.086,13.195,103.213)
N4: (64.269,10.921,103.204)
C6: (63.159,13.157,100.622)
C5: (63.476,11.995,101.200)
O3': (64.814,16.873,97.839)
OP1: (66.821,22.930,112.883)
OP2: (66.129,20.510,112.385)
C3': (66.634,22.789,107.795)
C1': (67.816,20.871,107.091)
C5': (67.925,22.930,110.010)
O6: (64.465,15.891,107.348)
O4': (68.463,21.391,108.246)
C8: (66.914,19.146,108.725)
C2: (65.496,18.068,104.733)
C6: (65.027,16.856,106.813)
C5: (65.817,17.874,107.418)
C4: (66.348,18.861,106.618)
P: (67.047,21.656,112.158)
C4': (67.976,22.736,108.516)
C2': (66.918,21.982,106.538)
O2': (67.608,22.732,105.565)
N1: (64.922,17.042,105.439)
N2: (65.288,18.062,103.404)
N3: (66.223,19.022,105.283)
N7: (66.179,18.068,108.745)
N9: (67.060,19.677,107.467)
O5': (67.054,21.949,110.592)
O3': (66.184,24.106,107.477)
OP2: (66.129,20.510,112.385)
C3': (66.634,22.789,107.795)
C1': (67.816,20.871,107.091)
C5': (67.925,22.930,110.010)
O6: (64.465,15.891,107.348)
O4': (68.463,21.391,108.246)
C8: (66.914,19.146,108.725)
C2: (65.496,18.068,104.733)
C6: (65.027,16.856,106.813)
C5: (65.817,17.874,107.418)
C4: (66.348,18.861,106.618)
P: (67.047,21.656,112.158)
C4': (67.976,22.736,108.516)
C2': (66.918,21.982,106.538)
O2': (67.608,22.732,105.565)
N1: (64.922,17.042,105.439)
N2: (65.288,18.062,103.404)
N3: (66.223,19.022,105.283)
N7: (66.179,18.068,108.745)
N9: (67.060,19.677,107.467)
O5': (67.054,21.949,110.592)
O3': (66.184,24.106,107.477)
Image (generated by PyMOL):