Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11851:12143
Extra
PDB:
ATOM 1 O3' G A1850 5.989 28.418 72.371 1.00 43.12 O
ATOM 2 P C A1851 6.165 28.048 73.929 1.00 38.10 P
ATOM 3 OP1 C A1851 5.717 26.629 74.141 1.00 37.84 O
ATOM 4 OP2 C A1851 5.504 29.078 74.693 1.00 38.51 O
ATOM 5 O5' C A1851 7.768 28.167 74.100 1.00 37.86 O
ATOM 6 C5' C A1851 8.558 27.098 74.630 1.00 37.50 C
ATOM 7 C4' C A1851 9.958 27.170 74.119 1.00 37.27 C
ATOM 8 O4' C A1851 9.946 27.107 72.675 1.00 37.20 O
ATOM 9 C3' C A1851 10.699 28.452 74.414 1.00 37.48 C
ATOM 10 O3' C A1851 11.315 28.429 75.675 1.00 37.45 O
ATOM 11 C2' C A1851 11.708 28.527 73.283 1.00 37.30 C
ATOM 12 O2' C A1851 12.782 27.684 73.554 1.00 36.95 O
ATOM 13 C1' C A1851 10.955 27.927 72.137 1.00 37.23 C
ATOM 14 N1 C A1851 10.338 28.953 71.319 1.00 37.55 N
ATOM 15 C2 C A1851 11.148 29.600 70.404 1.00 37.57 C
ATOM 16 O2 C A1851 12.349 29.297 70.272 1.00 37.31 O
ATOM 17 N3 C A1851 10.564 30.567 69.649 1.00 37.89 N
ATOM 18 C4 C A1851 9.291 30.881 69.719 1.00 38.18 C
ATOM 19 N4 C A1851 8.865 31.844 68.896 1.00 38.49 N
ATOM 20 C5 C A1851 8.467 30.235 70.660 1.00 38.16 C
ATOM 21 C6 C A1851 9.006 29.292 71.434 1.00 37.85 C
ATOM 22 P A A1852 11.058 29.586 76.709 1.00 43.89 P
ATOM 23 OP1 A A1852 11.767 29.259 77.939 1.00 43.78 O
ATOM 24 OP2 A A1852 9.668 29.717 76.766 1.00 44.14 O
ATOM 25 O5' A A1852 11.700 30.858 76.008 1.00 44.08 O
TER
ATOM 1 O3' G B2142 11.912 38.617 67.342 1.00 40.36 O
ATOM 2 P U B2143 11.888 37.408 68.369 1.00 45.29 P
ATOM 3 OP1 U B2143 11.046 37.818 69.480 1.00 45.56 O
ATOM 4 OP2 U B2143 13.268 37.027 68.647 1.00 44.97 O
ATOM 5 O5' U B2143 11.204 36.260 67.540 1.00 45.05 O
ATOM 6 C5' U B2143 11.890 35.045 67.320 1.00 44.59 C
ATOM 7 C4' U B2143 11.124 34.100 66.424 1.00 44.44 C
ATOM 8 O4' U B2143 9.735 34.005 66.815 1.00 44.64 O
ATOM 9 C3' U B2143 11.058 34.448 64.961 1.00 44.56 C
ATOM 10 O3' U B2143 12.268 34.173 64.307 1.00 44.30 O
ATOM 11 C2' U B2143 9.955 33.534 64.510 1.00 44.49 C
ATOM 12 O2' U B2143 10.426 32.212 64.467 1.00 44.05 O
ATOM 13 C1' U B2143 8.973 33.649 65.683 1.00 44.67 C
ATOM 14 N1 U B2143 7.925 34.707 65.424 1.00 45.15 N
ATOM 15 C2 U B2143 7.071 34.487 64.349 1.00 45.25 C
ATOM 16 O2 U B2143 7.115 33.510 63.637 1.00 44.99 O
ATOM 17 N3 U B2143 6.158 35.457 64.105 1.00 45.70 N
ATOM 18 C4 U B2143 6.009 36.609 64.817 1.00 46.05 C
ATOM 19 O4 U B2143 5.142 37.403 64.478 1.00 46.46 O
ATOM 20 C5 U B2143 6.915 36.766 65.906 1.00 45.92 C
ATOM 21 C6 U B2143 7.831 35.851 66.173 1.00 45.49 C
ATOM 22 P C B2144 12.944 35.215 63.287 1.00 43.06 P
ATOM 23 OP1 C B2144 14.331 34.692 63.045 1.00 42.71 O
ATOM 24 OP2 C B2144 12.788 36.580 63.861 1.00 43.47 O
ATOM 25 O5' C B2144 12.041 35.072 61.956 1.00 43.20 O
TER
ATOM 2 P C A1851 6.165 28.048 73.929 1.00 38.10 P
ATOM 3 OP1 C A1851 5.717 26.629 74.141 1.00 37.84 O
ATOM 4 OP2 C A1851 5.504 29.078 74.693 1.00 38.51 O
ATOM 5 O5' C A1851 7.768 28.167 74.100 1.00 37.86 O
ATOM 6 C5' C A1851 8.558 27.098 74.630 1.00 37.50 C
ATOM 7 C4' C A1851 9.958 27.170 74.119 1.00 37.27 C
ATOM 8 O4' C A1851 9.946 27.107 72.675 1.00 37.20 O
ATOM 9 C3' C A1851 10.699 28.452 74.414 1.00 37.48 C
ATOM 10 O3' C A1851 11.315 28.429 75.675 1.00 37.45 O
ATOM 11 C2' C A1851 11.708 28.527 73.283 1.00 37.30 C
ATOM 12 O2' C A1851 12.782 27.684 73.554 1.00 36.95 O
ATOM 13 C1' C A1851 10.955 27.927 72.137 1.00 37.23 C
ATOM 14 N1 C A1851 10.338 28.953 71.319 1.00 37.55 N
ATOM 15 C2 C A1851 11.148 29.600 70.404 1.00 37.57 C
ATOM 16 O2 C A1851 12.349 29.297 70.272 1.00 37.31 O
ATOM 17 N3 C A1851 10.564 30.567 69.649 1.00 37.89 N
ATOM 18 C4 C A1851 9.291 30.881 69.719 1.00 38.18 C
ATOM 19 N4 C A1851 8.865 31.844 68.896 1.00 38.49 N
ATOM 20 C5 C A1851 8.467 30.235 70.660 1.00 38.16 C
ATOM 21 C6 C A1851 9.006 29.292 71.434 1.00 37.85 C
ATOM 22 P A A1852 11.058 29.586 76.709 1.00 43.89 P
ATOM 23 OP1 A A1852 11.767 29.259 77.939 1.00 43.78 O
ATOM 24 OP2 A A1852 9.668 29.717 76.766 1.00 44.14 O
ATOM 25 O5' A A1852 11.700 30.858 76.008 1.00 44.08 O
TER
ATOM 1 O3' G B2142 11.912 38.617 67.342 1.00 40.36 O
ATOM 2 P U B2143 11.888 37.408 68.369 1.00 45.29 P
ATOM 3 OP1 U B2143 11.046 37.818 69.480 1.00 45.56 O
ATOM 4 OP2 U B2143 13.268 37.027 68.647 1.00 44.97 O
ATOM 5 O5' U B2143 11.204 36.260 67.540 1.00 45.05 O
ATOM 6 C5' U B2143 11.890 35.045 67.320 1.00 44.59 C
ATOM 7 C4' U B2143 11.124 34.100 66.424 1.00 44.44 C
ATOM 8 O4' U B2143 9.735 34.005 66.815 1.00 44.64 O
ATOM 9 C3' U B2143 11.058 34.448 64.961 1.00 44.56 C
ATOM 10 O3' U B2143 12.268 34.173 64.307 1.00 44.30 O
ATOM 11 C2' U B2143 9.955 33.534 64.510 1.00 44.49 C
ATOM 12 O2' U B2143 10.426 32.212 64.467 1.00 44.05 O
ATOM 13 C1' U B2143 8.973 33.649 65.683 1.00 44.67 C
ATOM 14 N1 U B2143 7.925 34.707 65.424 1.00 45.15 N
ATOM 15 C2 U B2143 7.071 34.487 64.349 1.00 45.25 C
ATOM 16 O2 U B2143 7.115 33.510 63.637 1.00 44.99 O
ATOM 17 N3 U B2143 6.158 35.457 64.105 1.00 45.70 N
ATOM 18 C4 U B2143 6.009 36.609 64.817 1.00 46.05 C
ATOM 19 O4 U B2143 5.142 37.403 64.478 1.00 46.46 O
ATOM 20 C5 U B2143 6.915 36.766 65.906 1.00 45.92 C
ATOM 21 C6 U B2143 7.831 35.851 66.173 1.00 45.49 C
ATOM 22 P C B2144 12.944 35.215 63.287 1.00 43.06 P
ATOM 23 OP1 C B2144 14.331 34.692 63.045 1.00 42.71 O
ATOM 24 OP2 C B2144 12.788 36.580 63.861 1.00 43.47 O
ATOM 25 O5' C B2144 12.041 35.072 61.956 1.00 43.20 O
TER
Atoms:
C2: (11.148,29.600,70.404)
OP1: (5.717,26.629,74.141)
OP2: (5.504,29.078,74.693)
C4: (9.291,30.881,69.719)
O5': (7.768,28.167,74.100)
C3': (10.699,28.452,74.414)
C1': (10.955,27.927,72.137)
O4': (9.946,27.107,72.675)
C5': (8.558,27.098,74.630)
P: (6.165,28.048,73.929)
O2: (12.349,29.297,70.272)
C4': (9.958,27.170,74.119)
C2': (11.708,28.527,73.283)
O2': (12.782,27.684,73.554)
N1: (10.338,28.953,71.319)
N3: (10.564,30.567,69.649)
N4: (8.865,31.844,68.896)
C6: (9.006,29.292,71.434)
C5: (8.467,30.235,70.660)
O3': (11.315,28.429,75.675)
OP1: (5.717,26.629,74.141)
OP2: (5.504,29.078,74.693)
C4: (9.291,30.881,69.719)
O5': (7.768,28.167,74.100)
C3': (10.699,28.452,74.414)
C1': (10.955,27.927,72.137)
O4': (9.946,27.107,72.675)
C5': (8.558,27.098,74.630)
P: (6.165,28.048,73.929)
O2: (12.349,29.297,70.272)
C4': (9.958,27.170,74.119)
C2': (11.708,28.527,73.283)
O2': (12.782,27.684,73.554)
N1: (10.338,28.953,71.319)
N3: (10.564,30.567,69.649)
N4: (8.865,31.844,68.896)
C6: (9.006,29.292,71.434)
C5: (8.467,30.235,70.660)
O3': (11.315,28.429,75.675)
C4: (6.009,36.609,64.817)
N3: (6.158,35.457,64.105)
OP1: (11.046,37.818,69.480)
OP2: (13.268,37.027,68.647)
C2: (7.071,34.487,64.349)
C1': (8.973,33.649,65.683)
C3': (11.058,34.448,64.961)
O5': (11.204,36.260,67.540)
O4': (9.735,34.005,66.815)
C5': (11.890,35.045,67.320)
P: (11.888,37.408,68.369)
C4': (11.124,34.100,66.424)
C2': (9.955,33.534,64.510)
O2': (10.426,32.212,64.467)
N1: (7.925,34.707,65.424)
O4: (5.142,37.403,64.478)
O2: (7.115,33.510,63.637)
C6: (7.831,35.851,66.173)
C5: (6.915,36.766,65.906)
O3': (12.268,34.173,64.307)
N3: (6.158,35.457,64.105)
OP1: (11.046,37.818,69.480)
OP2: (13.268,37.027,68.647)
C2: (7.071,34.487,64.349)
C1': (8.973,33.649,65.683)
C3': (11.058,34.448,64.961)
O5': (11.204,36.260,67.540)
O4': (9.735,34.005,66.815)
C5': (11.890,35.045,67.320)
P: (11.888,37.408,68.369)
C4': (11.124,34.100,66.424)
C2': (9.955,33.534,64.510)
O2': (10.426,32.212,64.467)
N1: (7.925,34.707,65.424)
O4: (5.142,37.403,64.478)
O2: (7.115,33.510,63.637)
C6: (7.831,35.851,66.173)
C5: (6.915,36.766,65.906)
O3': (12.268,34.173,64.307)
Image (generated by PyMOL):