Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12786:12772
Extra
PDB:
ATOM 1 O3' A A2785 2.722 37.679 19.260 1.00 70.74 O
ATOM 2 P C A2786 3.345 39.093 19.735 1.00 70.00 P
ATOM 3 OP1 C A2786 4.371 38.782 20.752 1.00 69.37 O
ATOM 4 OP2 C A2786 2.234 39.969 20.109 1.00 70.41 O
ATOM 5 O5' C A2786 4.042 39.654 18.398 1.00 70.42 O
ATOM 6 C5' C A2786 5.144 38.984 17.800 1.00 70.16 C
ATOM 7 C4' C A2786 5.533 39.616 16.494 1.00 70.67 C
ATOM 8 O4' C A2786 4.418 39.545 15.575 1.00 71.20 O
ATOM 9 C3' C A2786 5.875 41.098 16.531 1.00 71.03 C
ATOM 10 O3' C A2786 7.193 41.358 16.966 1.00 70.69 O
ATOM 11 C2' C A2786 5.645 41.503 15.095 1.00 71.68 C
ATOM 12 O2' C A2786 6.685 41.012 14.293 1.00 71.56 O
ATOM 13 C1' C A2786 4.398 40.704 14.761 1.00 71.82 C
ATOM 14 N1 C A2786 3.150 41.478 15.034 1.00 72.26 N
ATOM 15 C2 C A2786 2.732 42.523 14.177 1.00 72.98 C
ATOM 16 O2 C A2786 3.349 42.861 13.152 1.00 73.29 O
ATOM 17 N3 C A2786 1.619 43.199 14.469 1.00 73.36 N
ATOM 18 C4 C A2786 0.908 42.908 15.543 1.00 73.09 C
ATOM 19 N4 C A2786 -0.196 43.628 15.761 1.00 73.52 N
ATOM 20 C5 C A2786 1.289 41.871 16.436 1.00 72.37 C
ATOM 21 C6 C A2786 2.405 41.193 16.142 1.00 71.99 C
ATOM 22 P A A2787 7.472 42.453 18.118 1.00 64.52 P
ATOM 23 OP1 A A2787 8.876 42.282 18.566 1.00 64.03 O
ATOM 24 OP2 A A2787 6.389 42.313 19.124 1.00 64.40 O
ATOM 25 O5' A A2787 7.307 43.854 17.357 1.00 65.24 O
TER
ATOM 1 O3' U B2771 -5.988 49.643 19.116 1.00 68.94 O
ATOM 2 P U B2772 -7.033 48.686 18.344 1.00 63.03 P
ATOM 3 OP1 U B2772 -7.897 49.593 17.489 1.00 63.88 O
ATOM 4 OP2 U B2772 -7.685 47.826 19.356 1.00 62.59 O
ATOM 5 O5' U B2772 -6.092 47.807 17.421 1.00 62.74 O
ATOM 6 C5' U B2772 -5.276 48.397 16.429 1.00 63.05 C
ATOM 7 C4' U B2772 -4.259 47.409 15.937 1.00 62.58 C
ATOM 8 O4' U B2772 -3.420 46.992 17.040 1.00 61.85 O
ATOM 9 C3' U B2772 -4.816 46.109 15.389 1.00 62.46 C
ATOM 10 O3' U B2772 -5.229 46.233 14.062 1.00 63.07 O
ATOM 11 C2' U B2772 -3.662 45.140 15.570 1.00 61.76 C
ATOM 12 O2' U B2772 -2.697 45.288 14.528 1.00 61.90 O
ATOM 13 C1' U B2772 -3.059 45.638 16.888 1.00 61.34 C
ATOM 14 N1 U B2772 -3.593 44.890 18.035 1.00 60.86 N
ATOM 15 C2 U B2772 -2.900 43.764 18.416 1.00 60.18 C
ATOM 16 O2 U B2772 -1.904 43.438 17.834 1.00 60.00 O
ATOM 17 N3 U B2772 -3.435 43.067 19.472 1.00 59.77 N
ATOM 18 C4 U B2772 -4.597 43.409 20.148 1.00 59.98 C
ATOM 19 O4 U B2772 -5.003 42.719 21.064 1.00 59.59 O
ATOM 20 C5 U B2772 -5.258 44.600 19.701 1.00 60.69 C
ATOM 21 C6 U B2772 -4.750 45.287 18.671 1.00 61.10 C
ATOM 22 P A B2773 -6.414 45.329 13.494 1.00 69.38 P
ATOM 23 OP1 A B2773 -5.976 43.904 13.556 1.00 68.76 O
ATOM 24 OP2 A B2773 -6.779 45.916 12.156 1.00 70.15 O
ATOM 25 O5' A B2773 -7.573 45.565 14.546 1.00 69.42 O
TER
ATOM 2 P C A2786 3.345 39.093 19.735 1.00 70.00 P
ATOM 3 OP1 C A2786 4.371 38.782 20.752 1.00 69.37 O
ATOM 4 OP2 C A2786 2.234 39.969 20.109 1.00 70.41 O
ATOM 5 O5' C A2786 4.042 39.654 18.398 1.00 70.42 O
ATOM 6 C5' C A2786 5.144 38.984 17.800 1.00 70.16 C
ATOM 7 C4' C A2786 5.533 39.616 16.494 1.00 70.67 C
ATOM 8 O4' C A2786 4.418 39.545 15.575 1.00 71.20 O
ATOM 9 C3' C A2786 5.875 41.098 16.531 1.00 71.03 C
ATOM 10 O3' C A2786 7.193 41.358 16.966 1.00 70.69 O
ATOM 11 C2' C A2786 5.645 41.503 15.095 1.00 71.68 C
ATOM 12 O2' C A2786 6.685 41.012 14.293 1.00 71.56 O
ATOM 13 C1' C A2786 4.398 40.704 14.761 1.00 71.82 C
ATOM 14 N1 C A2786 3.150 41.478 15.034 1.00 72.26 N
ATOM 15 C2 C A2786 2.732 42.523 14.177 1.00 72.98 C
ATOM 16 O2 C A2786 3.349 42.861 13.152 1.00 73.29 O
ATOM 17 N3 C A2786 1.619 43.199 14.469 1.00 73.36 N
ATOM 18 C4 C A2786 0.908 42.908 15.543 1.00 73.09 C
ATOM 19 N4 C A2786 -0.196 43.628 15.761 1.00 73.52 N
ATOM 20 C5 C A2786 1.289 41.871 16.436 1.00 72.37 C
ATOM 21 C6 C A2786 2.405 41.193 16.142 1.00 71.99 C
ATOM 22 P A A2787 7.472 42.453 18.118 1.00 64.52 P
ATOM 23 OP1 A A2787 8.876 42.282 18.566 1.00 64.03 O
ATOM 24 OP2 A A2787 6.389 42.313 19.124 1.00 64.40 O
ATOM 25 O5' A A2787 7.307 43.854 17.357 1.00 65.24 O
TER
ATOM 1 O3' U B2771 -5.988 49.643 19.116 1.00 68.94 O
ATOM 2 P U B2772 -7.033 48.686 18.344 1.00 63.03 P
ATOM 3 OP1 U B2772 -7.897 49.593 17.489 1.00 63.88 O
ATOM 4 OP2 U B2772 -7.685 47.826 19.356 1.00 62.59 O
ATOM 5 O5' U B2772 -6.092 47.807 17.421 1.00 62.74 O
ATOM 6 C5' U B2772 -5.276 48.397 16.429 1.00 63.05 C
ATOM 7 C4' U B2772 -4.259 47.409 15.937 1.00 62.58 C
ATOM 8 O4' U B2772 -3.420 46.992 17.040 1.00 61.85 O
ATOM 9 C3' U B2772 -4.816 46.109 15.389 1.00 62.46 C
ATOM 10 O3' U B2772 -5.229 46.233 14.062 1.00 63.07 O
ATOM 11 C2' U B2772 -3.662 45.140 15.570 1.00 61.76 C
ATOM 12 O2' U B2772 -2.697 45.288 14.528 1.00 61.90 O
ATOM 13 C1' U B2772 -3.059 45.638 16.888 1.00 61.34 C
ATOM 14 N1 U B2772 -3.593 44.890 18.035 1.00 60.86 N
ATOM 15 C2 U B2772 -2.900 43.764 18.416 1.00 60.18 C
ATOM 16 O2 U B2772 -1.904 43.438 17.834 1.00 60.00 O
ATOM 17 N3 U B2772 -3.435 43.067 19.472 1.00 59.77 N
ATOM 18 C4 U B2772 -4.597 43.409 20.148 1.00 59.98 C
ATOM 19 O4 U B2772 -5.003 42.719 21.064 1.00 59.59 O
ATOM 20 C5 U B2772 -5.258 44.600 19.701 1.00 60.69 C
ATOM 21 C6 U B2772 -4.750 45.287 18.671 1.00 61.10 C
ATOM 22 P A B2773 -6.414 45.329 13.494 1.00 69.38 P
ATOM 23 OP1 A B2773 -5.976 43.904 13.556 1.00 68.76 O
ATOM 24 OP2 A B2773 -6.779 45.916 12.156 1.00 70.15 O
ATOM 25 O5' A B2773 -7.573 45.565 14.546 1.00 69.42 O
TER
Atoms:
C2: (2.732,42.523,14.177)
OP1: (4.371,38.782,20.752)
OP2: (2.234,39.969,20.109)
C4: (0.908,42.908,15.543)
O5': (4.042,39.654,18.398)
C3': (5.875,41.098,16.531)
C1': (4.398,40.704,14.761)
O4': (4.418,39.545,15.575)
C5': (5.144,38.984,17.800)
P: (3.345,39.093,19.735)
O2: (3.349,42.861,13.152)
C4': (5.533,39.616,16.494)
C2': (5.645,41.503,15.095)
O2': (6.685,41.012,14.293)
N1: (3.150,41.478,15.034)
N3: (1.619,43.199,14.469)
N4: (-0.196,43.628,15.761)
C6: (2.405,41.193,16.142)
C5: (1.289,41.871,16.436)
O3': (7.193,41.358,16.966)
OP1: (4.371,38.782,20.752)
OP2: (2.234,39.969,20.109)
C4: (0.908,42.908,15.543)
O5': (4.042,39.654,18.398)
C3': (5.875,41.098,16.531)
C1': (4.398,40.704,14.761)
O4': (4.418,39.545,15.575)
C5': (5.144,38.984,17.800)
P: (3.345,39.093,19.735)
O2: (3.349,42.861,13.152)
C4': (5.533,39.616,16.494)
C2': (5.645,41.503,15.095)
O2': (6.685,41.012,14.293)
N1: (3.150,41.478,15.034)
N3: (1.619,43.199,14.469)
N4: (-0.196,43.628,15.761)
C6: (2.405,41.193,16.142)
C5: (1.289,41.871,16.436)
O3': (7.193,41.358,16.966)
C4: (-4.597,43.409,20.148)
N3: (-3.435,43.067,19.472)
OP1: (-7.897,49.593,17.489)
OP2: (-7.685,47.826,19.356)
C2: (-2.900,43.764,18.416)
C1': (-3.059,45.638,16.888)
C3': (-4.816,46.109,15.389)
O5': (-6.092,47.807,17.421)
O4': (-3.420,46.992,17.040)
C5': (-5.276,48.397,16.429)
P: (-7.033,48.686,18.344)
C4': (-4.259,47.409,15.937)
C2': (-3.662,45.140,15.570)
O2': (-2.697,45.288,14.528)
N1: (-3.593,44.890,18.035)
O4: (-5.003,42.719,21.064)
O2: (-1.904,43.438,17.834)
C6: (-4.750,45.287,18.671)
C5: (-5.258,44.600,19.701)
O3': (-5.229,46.233,14.062)
N3: (-3.435,43.067,19.472)
OP1: (-7.897,49.593,17.489)
OP2: (-7.685,47.826,19.356)
C2: (-2.900,43.764,18.416)
C1': (-3.059,45.638,16.888)
C3': (-4.816,46.109,15.389)
O5': (-6.092,47.807,17.421)
O4': (-3.420,46.992,17.040)
C5': (-5.276,48.397,16.429)
P: (-7.033,48.686,18.344)
C4': (-4.259,47.409,15.937)
C2': (-3.662,45.140,15.570)
O2': (-2.697,45.288,14.528)
N1: (-3.593,44.890,18.035)
O4: (-5.003,42.719,21.064)
O2: (-1.904,43.438,17.834)
C6: (-4.750,45.287,18.671)
C5: (-5.258,44.600,19.701)
O3': (-5.229,46.233,14.062)
Image (generated by PyMOL):