Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0272:0355
Extra
PDB:
ATOM 1 O3' U A 271 65.018 103.970 -8.084 1.00140.82 O
ATOM 2 P C A 272 63.542 103.384 -7.824 1.00140.78 P
ATOM 3 OP1 C A 272 63.678 101.909 -7.700 1.00141.30 O
ATOM 4 OP2 C A 272 62.602 103.952 -8.822 1.00140.40 O
ATOM 5 O5' C A 272 63.147 103.953 -6.392 1.00139.50 O
ATOM 6 C5' C A 272 64.015 104.863 -5.702 1.00137.75 C
ATOM 7 C4' C A 272 63.452 106.261 -5.760 1.00136.26 C
ATOM 8 O4' C A 272 63.508 106.771 -7.126 1.00136.64 O
ATOM 9 C3' C A 272 62.000 106.397 -5.317 1.00134.84 C
ATOM 10 O3' C A 272 61.866 107.630 -4.630 1.00131.79 O
ATOM 11 C2' C A 272 61.247 106.427 -6.644 1.00135.35 C
ATOM 12 O2' C A 272 59.990 107.071 -6.573 1.00135.71 O
ATOM 13 C1' C A 272 62.223 107.219 -7.514 1.00135.90 C
ATOM 14 N1 C A 272 62.085 107.077 -8.982 1.00135.71 N
ATOM 15 C2 C A 272 62.947 107.812 -9.817 1.00135.35 C
ATOM 16 O2 C A 272 63.800 108.552 -9.307 1.00134.56 O
ATOM 17 N3 C A 272 62.825 107.696 -11.156 1.00135.48 N
ATOM 18 C4 C A 272 61.900 106.887 -11.676 1.00135.88 C
ATOM 19 N4 C A 272 61.825 106.798 -13.006 1.00136.13 N
ATOM 20 C5 C A 272 61.012 106.132 -10.858 1.00135.74 C
ATOM 21 C6 C A 272 61.137 106.255 -9.531 1.00135.80 C
ATOM 22 P A A 273 62.061 107.669 -3.039 1.00129.72 P
ATOM 23 OP1 A A 273 60.806 107.154 -2.424 1.00129.94 O
ATOM 24 OP2 A A 273 62.559 109.019 -2.670 1.00130.44 O
ATOM 25 O5' A A 273 63.237 106.622 -2.782 1.00125.58 O
TER
ATOM 1 O3' U B 354 73.630 112.597 -9.622 1.00101.16 O
ATOM 2 P G B 355 73.801 111.478 -10.767 1.00101.83 P
ATOM 3 OP1 G B 355 75.223 111.544 -11.199 1.00101.39 O
ATOM 4 OP2 G B 355 72.719 111.655 -11.772 1.00101.42 O
ATOM 5 O5' G B 355 73.570 110.091 -10.015 1.00101.96 O
ATOM 6 C5' G B 355 74.196 109.825 -8.746 1.00103.21 C
ATOM 7 C4' G B 355 73.317 108.928 -7.902 1.00104.48 C
ATOM 8 O4' G B 355 71.981 109.507 -7.852 1.00104.25 O
ATOM 9 C3' G B 355 73.132 107.491 -8.388 1.00105.37 C
ATOM 10 O3' G B 355 72.946 106.646 -7.251 1.00106.46 O
ATOM 11 C2' G B 355 71.836 107.578 -9.191 1.00105.13 C
ATOM 12 O2' G B 355 71.145 106.346 -9.297 1.00105.06 O
ATOM 13 C1' G B 355 71.040 108.582 -8.361 1.00104.23 C
ATOM 14 N9 G B 355 70.040 109.320 -9.126 1.00103.61 N
ATOM 15 C8 G B 355 70.250 110.101 -10.239 1.00103.93 C
ATOM 16 N7 G B 355 69.152 110.632 -10.705 1.00104.14 N
ATOM 17 C5 G B 355 68.158 110.174 -9.850 1.00103.95 C
ATOM 18 C6 G B 355 66.758 110.415 -9.853 1.00104.02 C
ATOM 19 O6 G B 355 66.092 111.098 -10.643 1.00104.40 O
ATOM 20 N1 G B 355 66.128 109.760 -8.801 1.00103.41 N
ATOM 21 C2 G B 355 66.757 108.974 -7.868 1.00102.72 C
ATOM 22 N2 G B 355 65.975 108.428 -6.929 1.00103.21 N
ATOM 23 N3 G B 355 68.056 108.739 -7.857 1.00102.41 N
ATOM 24 C4 G B 355 68.691 109.366 -8.868 1.00103.33 C
ATOM 25 P C B 356 73.600 105.174 -7.216 1.00106.52 P
ATOM 26 OP1 C B 356 74.844 105.245 -6.402 1.00105.94 O
ATOM 27 OP2 C B 356 73.658 104.638 -8.601 1.00106.73 O
ATOM 28 O5' C B 356 72.533 104.321 -6.398 1.00106.41 O
TER
ATOM 2 P C A 272 63.542 103.384 -7.824 1.00140.78 P
ATOM 3 OP1 C A 272 63.678 101.909 -7.700 1.00141.30 O
ATOM 4 OP2 C A 272 62.602 103.952 -8.822 1.00140.40 O
ATOM 5 O5' C A 272 63.147 103.953 -6.392 1.00139.50 O
ATOM 6 C5' C A 272 64.015 104.863 -5.702 1.00137.75 C
ATOM 7 C4' C A 272 63.452 106.261 -5.760 1.00136.26 C
ATOM 8 O4' C A 272 63.508 106.771 -7.126 1.00136.64 O
ATOM 9 C3' C A 272 62.000 106.397 -5.317 1.00134.84 C
ATOM 10 O3' C A 272 61.866 107.630 -4.630 1.00131.79 O
ATOM 11 C2' C A 272 61.247 106.427 -6.644 1.00135.35 C
ATOM 12 O2' C A 272 59.990 107.071 -6.573 1.00135.71 O
ATOM 13 C1' C A 272 62.223 107.219 -7.514 1.00135.90 C
ATOM 14 N1 C A 272 62.085 107.077 -8.982 1.00135.71 N
ATOM 15 C2 C A 272 62.947 107.812 -9.817 1.00135.35 C
ATOM 16 O2 C A 272 63.800 108.552 -9.307 1.00134.56 O
ATOM 17 N3 C A 272 62.825 107.696 -11.156 1.00135.48 N
ATOM 18 C4 C A 272 61.900 106.887 -11.676 1.00135.88 C
ATOM 19 N4 C A 272 61.825 106.798 -13.006 1.00136.13 N
ATOM 20 C5 C A 272 61.012 106.132 -10.858 1.00135.74 C
ATOM 21 C6 C A 272 61.137 106.255 -9.531 1.00135.80 C
ATOM 22 P A A 273 62.061 107.669 -3.039 1.00129.72 P
ATOM 23 OP1 A A 273 60.806 107.154 -2.424 1.00129.94 O
ATOM 24 OP2 A A 273 62.559 109.019 -2.670 1.00130.44 O
ATOM 25 O5' A A 273 63.237 106.622 -2.782 1.00125.58 O
TER
ATOM 1 O3' U B 354 73.630 112.597 -9.622 1.00101.16 O
ATOM 2 P G B 355 73.801 111.478 -10.767 1.00101.83 P
ATOM 3 OP1 G B 355 75.223 111.544 -11.199 1.00101.39 O
ATOM 4 OP2 G B 355 72.719 111.655 -11.772 1.00101.42 O
ATOM 5 O5' G B 355 73.570 110.091 -10.015 1.00101.96 O
ATOM 6 C5' G B 355 74.196 109.825 -8.746 1.00103.21 C
ATOM 7 C4' G B 355 73.317 108.928 -7.902 1.00104.48 C
ATOM 8 O4' G B 355 71.981 109.507 -7.852 1.00104.25 O
ATOM 9 C3' G B 355 73.132 107.491 -8.388 1.00105.37 C
ATOM 10 O3' G B 355 72.946 106.646 -7.251 1.00106.46 O
ATOM 11 C2' G B 355 71.836 107.578 -9.191 1.00105.13 C
ATOM 12 O2' G B 355 71.145 106.346 -9.297 1.00105.06 O
ATOM 13 C1' G B 355 71.040 108.582 -8.361 1.00104.23 C
ATOM 14 N9 G B 355 70.040 109.320 -9.126 1.00103.61 N
ATOM 15 C8 G B 355 70.250 110.101 -10.239 1.00103.93 C
ATOM 16 N7 G B 355 69.152 110.632 -10.705 1.00104.14 N
ATOM 17 C5 G B 355 68.158 110.174 -9.850 1.00103.95 C
ATOM 18 C6 G B 355 66.758 110.415 -9.853 1.00104.02 C
ATOM 19 O6 G B 355 66.092 111.098 -10.643 1.00104.40 O
ATOM 20 N1 G B 355 66.128 109.760 -8.801 1.00103.41 N
ATOM 21 C2 G B 355 66.757 108.974 -7.868 1.00102.72 C
ATOM 22 N2 G B 355 65.975 108.428 -6.929 1.00103.21 N
ATOM 23 N3 G B 355 68.056 108.739 -7.857 1.00102.41 N
ATOM 24 C4 G B 355 68.691 109.366 -8.868 1.00103.33 C
ATOM 25 P C B 356 73.600 105.174 -7.216 1.00106.52 P
ATOM 26 OP1 C B 356 74.844 105.245 -6.402 1.00105.94 O
ATOM 27 OP2 C B 356 73.658 104.638 -8.601 1.00106.73 O
ATOM 28 O5' C B 356 72.533 104.321 -6.398 1.00106.41 O
TER
Atoms:
C2: (62.947,107.812,-9.817)
OP1: (63.678,101.909,-7.700)
OP2: (62.602,103.952,-8.822)
C4: (61.900,106.887,-11.676)
O5': (63.147,103.953,-6.392)
C3': (62.000,106.397,-5.317)
C1': (62.223,107.219,-7.514)
O4': (63.508,106.771,-7.126)
C5': (64.015,104.863,-5.702)
P: (63.542,103.384,-7.824)
O2: (63.800,108.552,-9.307)
C4': (63.452,106.261,-5.760)
C2': (61.247,106.427,-6.644)
O2': (59.990,107.071,-6.573)
N1: (62.085,107.077,-8.982)
N3: (62.825,107.696,-11.156)
N4: (61.825,106.798,-13.006)
C6: (61.137,106.255,-9.531)
C5: (61.012,106.132,-10.858)
O3': (61.866,107.630,-4.630)
OP1: (63.678,101.909,-7.700)
OP2: (62.602,103.952,-8.822)
C4: (61.900,106.887,-11.676)
O5': (63.147,103.953,-6.392)
C3': (62.000,106.397,-5.317)
C1': (62.223,107.219,-7.514)
O4': (63.508,106.771,-7.126)
C5': (64.015,104.863,-5.702)
P: (63.542,103.384,-7.824)
O2: (63.800,108.552,-9.307)
C4': (63.452,106.261,-5.760)
C2': (61.247,106.427,-6.644)
O2': (59.990,107.071,-6.573)
N1: (62.085,107.077,-8.982)
N3: (62.825,107.696,-11.156)
N4: (61.825,106.798,-13.006)
C6: (61.137,106.255,-9.531)
C5: (61.012,106.132,-10.858)
O3': (61.866,107.630,-4.630)
OP1: (75.223,111.544,-11.199)
OP2: (72.719,111.655,-11.772)
C3': (73.132,107.491,-8.388)
C1': (71.040,108.582,-8.361)
C5': (74.196,109.825,-8.746)
O6: (66.092,111.098,-10.643)
O4': (71.981,109.507,-7.852)
C8: (70.250,110.101,-10.239)
C2: (66.757,108.974,-7.868)
C6: (66.758,110.415,-9.853)
C5: (68.158,110.174,-9.850)
C4: (68.691,109.366,-8.868)
P: (73.801,111.478,-10.767)
C4': (73.317,108.928,-7.902)
C2': (71.836,107.578,-9.191)
O2': (71.145,106.346,-9.297)
N1: (66.128,109.760,-8.801)
N2: (65.975,108.428,-6.929)
N3: (68.056,108.739,-7.857)
N7: (69.152,110.632,-10.705)
N9: (70.040,109.320,-9.126)
O5': (73.570,110.091,-10.015)
O3': (72.946,106.646,-7.251)
OP2: (72.719,111.655,-11.772)
C3': (73.132,107.491,-8.388)
C1': (71.040,108.582,-8.361)
C5': (74.196,109.825,-8.746)
O6: (66.092,111.098,-10.643)
O4': (71.981,109.507,-7.852)
C8: (70.250,110.101,-10.239)
C2: (66.757,108.974,-7.868)
C6: (66.758,110.415,-9.853)
C5: (68.158,110.174,-9.850)
C4: (68.691,109.366,-8.868)
P: (73.801,111.478,-10.767)
C4': (73.317,108.928,-7.902)
C2': (71.836,107.578,-9.191)
O2': (71.145,106.346,-9.297)
N1: (66.128,109.760,-8.801)
N2: (65.975,108.428,-6.929)
N3: (68.056,108.739,-7.857)
N7: (69.152,110.632,-10.705)
N9: (70.040,109.320,-9.126)
O5': (73.570,110.091,-10.015)
O3': (72.946,106.646,-7.251)
Image (generated by PyMOL):