Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:926:957
Extra
PDB:
ATOM 1 O3' C A 25 61.219 12.240 96.237 1.00 76.85 O
ATOM 2 P C A 26 62.771 12.640 96.209 1.00 73.44 P
ATOM 3 OP1 C A 26 63.023 13.243 94.872 1.00 73.56 O
ATOM 4 OP2 C A 26 63.577 11.476 96.654 1.00 72.95 O
ATOM 5 O5' C A 26 62.870 13.767 97.326 1.00 72.21 O
ATOM 6 C5' C A 26 62.162 15.015 97.183 1.00 72.70 C
ATOM 7 C4' C A 26 62.560 15.970 98.286 1.00 72.88 C
ATOM 8 O4' C A 26 61.903 15.619 99.534 1.00 73.79 O
ATOM 9 C3' C A 26 64.036 15.942 98.627 1.00 71.78 C
ATOM 10 O3' C A 26 64.801 16.701 97.720 1.00 70.22 O
ATOM 11 C2' C A 26 64.057 16.472 100.047 1.00 71.18 C
ATOM 12 O2' C A 26 63.900 17.874 100.081 1.00 71.86 O
ATOM 13 C1' C A 26 62.804 15.804 100.619 1.00 72.06 C
ATOM 14 N1 C A 26 63.079 14.481 101.215 1.00 72.38 N
ATOM 15 C2 C A 26 63.554 14.412 102.532 1.00 72.90 C
ATOM 16 O2 C A 26 63.734 15.463 103.171 1.00 71.82 O
ATOM 17 N3 C A 26 63.811 13.197 103.073 1.00 73.64 N
ATOM 18 C4 C A 26 63.618 12.088 102.355 1.00 72.84 C
ATOM 19 N4 C A 26 63.901 10.919 102.928 1.00 73.67 N
ATOM 20 C5 C A 26 63.131 12.129 101.020 1.00 71.63 C
ATOM 21 C6 C A 26 62.876 13.331 100.495 1.00 71.99 C
ATOM 22 P U A 27 66.364 16.404 97.587 1.00 69.93 P
ATOM 23 OP1 U A 27 66.821 16.946 96.283 1.00 70.89 O
ATOM 24 OP2 U A 27 66.590 14.972 97.904 1.00 71.41 O
ATOM 25 O5' U A 27 66.974 17.270 98.768 1.00 67.73 O
TER
ATOM 1 O3' A B 56 68.344 20.982 112.575 1.00 72.71 O
ATOM 2 P G B 57 66.968 21.573 111.978 1.00 70.98 P
ATOM 3 OP1 G B 57 66.794 22.942 112.512 1.00 71.37 O
ATOM 4 OP2 G B 57 65.905 20.560 112.194 1.00 71.08 O
ATOM 5 O5' G B 57 67.217 21.691 110.408 1.00 70.15 O
ATOM 6 C5' G B 57 67.940 22.805 109.848 1.00 68.03 C
ATOM 7 C4' G B 57 67.907 22.735 108.344 1.00 67.04 C
ATOM 8 O4' G B 57 68.442 21.445 107.952 1.00 66.63 O
ATOM 9 C3' G B 57 66.522 22.775 107.707 1.00 67.82 C
ATOM 10 O3' G B 57 66.042 24.104 107.492 1.00 69.16 O
ATOM 11 C2' G B 57 66.756 22.054 106.390 1.00 67.65 C
ATOM 12 O2' G B 57 67.349 22.883 105.411 1.00 67.68 O
ATOM 13 C1' G B 57 67.735 20.957 106.822 1.00 67.77 C
ATOM 14 N9 G B 57 67.044 19.730 107.209 1.00 67.40 N
ATOM 15 C8 G B 57 66.918 19.213 108.474 1.00 66.98 C
ATOM 16 N7 G B 57 66.203 18.123 108.511 1.00 67.53 N
ATOM 17 C5 G B 57 65.844 17.901 107.189 1.00 66.74 C
ATOM 18 C6 G B 57 65.061 16.868 106.610 1.00 67.18 C
ATOM 19 O6 G B 57 64.491 15.926 107.170 1.00 67.79 O
ATOM 20 N1 G B 57 64.965 17.014 105.232 1.00 66.50 N
ATOM 21 C2 G B 57 65.534 18.025 104.507 1.00 66.56 C
ATOM 22 N2 G B 57 65.336 17.985 103.184 1.00 67.74 N
ATOM 23 N3 G B 57 66.249 19.003 105.036 1.00 66.51 N
ATOM 24 C4 G B 57 66.365 18.876 106.372 1.00 66.53 C
ATOM 25 P C B 58 64.509 24.476 107.839 1.00 70.09 P
ATOM 26 OP1 C B 58 64.227 25.849 107.353 1.00 69.67 O
ATOM 27 OP2 C B 58 64.292 24.152 109.271 1.00 72.38 O
ATOM 28 O5' C B 58 63.640 23.478 106.957 1.00 67.80 O
TER
ATOM 2 P C A 26 62.771 12.640 96.209 1.00 73.44 P
ATOM 3 OP1 C A 26 63.023 13.243 94.872 1.00 73.56 O
ATOM 4 OP2 C A 26 63.577 11.476 96.654 1.00 72.95 O
ATOM 5 O5' C A 26 62.870 13.767 97.326 1.00 72.21 O
ATOM 6 C5' C A 26 62.162 15.015 97.183 1.00 72.70 C
ATOM 7 C4' C A 26 62.560 15.970 98.286 1.00 72.88 C
ATOM 8 O4' C A 26 61.903 15.619 99.534 1.00 73.79 O
ATOM 9 C3' C A 26 64.036 15.942 98.627 1.00 71.78 C
ATOM 10 O3' C A 26 64.801 16.701 97.720 1.00 70.22 O
ATOM 11 C2' C A 26 64.057 16.472 100.047 1.00 71.18 C
ATOM 12 O2' C A 26 63.900 17.874 100.081 1.00 71.86 O
ATOM 13 C1' C A 26 62.804 15.804 100.619 1.00 72.06 C
ATOM 14 N1 C A 26 63.079 14.481 101.215 1.00 72.38 N
ATOM 15 C2 C A 26 63.554 14.412 102.532 1.00 72.90 C
ATOM 16 O2 C A 26 63.734 15.463 103.171 1.00 71.82 O
ATOM 17 N3 C A 26 63.811 13.197 103.073 1.00 73.64 N
ATOM 18 C4 C A 26 63.618 12.088 102.355 1.00 72.84 C
ATOM 19 N4 C A 26 63.901 10.919 102.928 1.00 73.67 N
ATOM 20 C5 C A 26 63.131 12.129 101.020 1.00 71.63 C
ATOM 21 C6 C A 26 62.876 13.331 100.495 1.00 71.99 C
ATOM 22 P U A 27 66.364 16.404 97.587 1.00 69.93 P
ATOM 23 OP1 U A 27 66.821 16.946 96.283 1.00 70.89 O
ATOM 24 OP2 U A 27 66.590 14.972 97.904 1.00 71.41 O
ATOM 25 O5' U A 27 66.974 17.270 98.768 1.00 67.73 O
TER
ATOM 1 O3' A B 56 68.344 20.982 112.575 1.00 72.71 O
ATOM 2 P G B 57 66.968 21.573 111.978 1.00 70.98 P
ATOM 3 OP1 G B 57 66.794 22.942 112.512 1.00 71.37 O
ATOM 4 OP2 G B 57 65.905 20.560 112.194 1.00 71.08 O
ATOM 5 O5' G B 57 67.217 21.691 110.408 1.00 70.15 O
ATOM 6 C5' G B 57 67.940 22.805 109.848 1.00 68.03 C
ATOM 7 C4' G B 57 67.907 22.735 108.344 1.00 67.04 C
ATOM 8 O4' G B 57 68.442 21.445 107.952 1.00 66.63 O
ATOM 9 C3' G B 57 66.522 22.775 107.707 1.00 67.82 C
ATOM 10 O3' G B 57 66.042 24.104 107.492 1.00 69.16 O
ATOM 11 C2' G B 57 66.756 22.054 106.390 1.00 67.65 C
ATOM 12 O2' G B 57 67.349 22.883 105.411 1.00 67.68 O
ATOM 13 C1' G B 57 67.735 20.957 106.822 1.00 67.77 C
ATOM 14 N9 G B 57 67.044 19.730 107.209 1.00 67.40 N
ATOM 15 C8 G B 57 66.918 19.213 108.474 1.00 66.98 C
ATOM 16 N7 G B 57 66.203 18.123 108.511 1.00 67.53 N
ATOM 17 C5 G B 57 65.844 17.901 107.189 1.00 66.74 C
ATOM 18 C6 G B 57 65.061 16.868 106.610 1.00 67.18 C
ATOM 19 O6 G B 57 64.491 15.926 107.170 1.00 67.79 O
ATOM 20 N1 G B 57 64.965 17.014 105.232 1.00 66.50 N
ATOM 21 C2 G B 57 65.534 18.025 104.507 1.00 66.56 C
ATOM 22 N2 G B 57 65.336 17.985 103.184 1.00 67.74 N
ATOM 23 N3 G B 57 66.249 19.003 105.036 1.00 66.51 N
ATOM 24 C4 G B 57 66.365 18.876 106.372 1.00 66.53 C
ATOM 25 P C B 58 64.509 24.476 107.839 1.00 70.09 P
ATOM 26 OP1 C B 58 64.227 25.849 107.353 1.00 69.67 O
ATOM 27 OP2 C B 58 64.292 24.152 109.271 1.00 72.38 O
ATOM 28 O5' C B 58 63.640 23.478 106.957 1.00 67.80 O
TER
Atoms:
C2: (63.554,14.412,102.532)
OP1: (63.023,13.243,94.872)
OP2: (63.577,11.476,96.654)
C4: (63.618,12.088,102.355)
O5': (62.870,13.767,97.326)
C3': (64.036,15.942,98.627)
C1': (62.804,15.804,100.619)
O4': (61.903,15.619,99.534)
C5': (62.162,15.015,97.183)
P: (62.771,12.640,96.209)
O2: (63.734,15.463,103.171)
C4': (62.560,15.970,98.286)
C2': (64.057,16.472,100.047)
O2': (63.900,17.874,100.081)
N1: (63.079,14.481,101.215)
N3: (63.811,13.197,103.073)
N4: (63.901,10.919,102.928)
C6: (62.876,13.331,100.495)
C5: (63.131,12.129,101.020)
O3': (64.801,16.701,97.720)
OP1: (63.023,13.243,94.872)
OP2: (63.577,11.476,96.654)
C4: (63.618,12.088,102.355)
O5': (62.870,13.767,97.326)
C3': (64.036,15.942,98.627)
C1': (62.804,15.804,100.619)
O4': (61.903,15.619,99.534)
C5': (62.162,15.015,97.183)
P: (62.771,12.640,96.209)
O2: (63.734,15.463,103.171)
C4': (62.560,15.970,98.286)
C2': (64.057,16.472,100.047)
O2': (63.900,17.874,100.081)
N1: (63.079,14.481,101.215)
N3: (63.811,13.197,103.073)
N4: (63.901,10.919,102.928)
C6: (62.876,13.331,100.495)
C5: (63.131,12.129,101.020)
O3': (64.801,16.701,97.720)
OP1: (66.794,22.942,112.512)
OP2: (65.905,20.560,112.194)
C3': (66.522,22.775,107.707)
C1': (67.735,20.957,106.822)
C5': (67.940,22.805,109.848)
O6: (64.491,15.926,107.170)
O4': (68.442,21.445,107.952)
C8: (66.918,19.213,108.474)
C2: (65.534,18.025,104.507)
C6: (65.061,16.868,106.610)
C5: (65.844,17.901,107.189)
C4: (66.365,18.876,106.372)
P: (66.968,21.573,111.978)
C4': (67.907,22.735,108.344)
C2': (66.756,22.054,106.390)
O2': (67.349,22.883,105.411)
N1: (64.965,17.014,105.232)
N2: (65.336,17.985,103.184)
N3: (66.249,19.003,105.036)
N7: (66.203,18.123,108.511)
N9: (67.044,19.730,107.209)
O5': (67.217,21.691,110.408)
O3': (66.042,24.104,107.492)
OP2: (65.905,20.560,112.194)
C3': (66.522,22.775,107.707)
C1': (67.735,20.957,106.822)
C5': (67.940,22.805,109.848)
O6: (64.491,15.926,107.170)
O4': (68.442,21.445,107.952)
C8: (66.918,19.213,108.474)
C2: (65.534,18.025,104.507)
C6: (65.061,16.868,106.610)
C5: (65.844,17.901,107.189)
C4: (66.365,18.876,106.372)
P: (66.968,21.573,111.978)
C4': (67.907,22.735,108.344)
C2': (66.756,22.054,106.390)
O2': (67.349,22.883,105.411)
N1: (64.965,17.014,105.232)
N2: (65.336,17.985,103.184)
N3: (66.249,19.003,105.036)
N7: (66.203,18.123,108.511)
N9: (67.044,19.730,107.209)
O5': (67.217,21.691,110.408)
O3': (66.042,24.104,107.492)
Image (generated by PyMOL):