Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M4:M131
Extra
PDB:
ATOM 1 O3' U A 3 -44.448 25.121-125.501 1.00197.80 O
ATOM 2 P C A 4 -43.714 26.270-124.676 1.00197.35 P
ATOM 3 OP1 C A 4 -44.655 27.410-124.611 1.00196.18 O
ATOM 4 OP2 C A 4 -42.387 26.497-125.294 1.00193.12 O
ATOM 5 O5' C A 4 -43.520 25.653-123.203 1.00204.68 O
ATOM 6 C5' C A 4 -43.699 24.257-122.906 1.00211.25 C
ATOM 7 C4' C A 4 -42.386 23.483-122.831 1.00211.99 C
ATOM 8 O4' C A 4 -41.936 23.117-124.160 1.00207.33 O
ATOM 9 C3' C A 4 -41.134 24.177-122.303 1.00210.17 C
ATOM 10 O3' C A 4 -41.154 24.456-120.897 1.00217.47 O
ATOM 11 C2' C A 4 -40.110 23.112-122.679 1.00209.32 C
ATOM 12 O2' C A 4 -40.148 21.953-121.881 1.00216.56 O
ATOM 13 C1' C A 4 -40.566 22.759-124.084 1.00205.62 C
ATOM 14 N1 C A 4 -39.728 23.457-125.119 1.00198.86 N
ATOM 15 C2 C A 4 -38.673 22.760-125.735 1.00197.56 C
ATOM 16 O2 C A 4 -38.476 21.585-125.418 1.00201.76 O
ATOM 17 N3 C A 4 -37.895 23.389-126.661 1.00191.96 N
ATOM 18 C4 C A 4 -38.141 24.670-126.970 1.00187.93 C
ATOM 19 N4 C A 4 -37.367 25.258-127.882 1.00183.44 N
ATOM 20 C5 C A 4 -39.204 25.407-126.361 1.00189.11 C
ATOM 21 C6 C A 4 -39.957 24.770-125.452 1.00194.59 C
ATOM 22 P G A 5 -40.248 25.623-120.244 1.00216.78 P
ATOM 23 OP1 G A 5 -40.942 26.060-119.010 1.00222.56 O
ATOM 24 OP2 G A 5 -39.884 26.629-121.274 1.00209.02 O
ATOM 25 O5' G A 5 -38.923 24.853-119.806 1.00219.24 O
TER
ATOM 1 O3' C B 130 -31.112 15.427-127.717 1.00214.10 O
ATOM 2 P G B 131 -31.600 14.789-129.107 1.00216.42 P
ATOM 3 OP1 G B 131 -30.408 14.216-129.775 1.00216.19 O
ATOM 4 OP2 G B 131 -32.449 15.775-129.822 1.00210.49 O
ATOM 5 O5' G B 131 -32.487 13.527-128.676 1.00225.68 O
ATOM 6 C5' G B 131 -32.455 12.954-127.367 1.00235.23 C
ATOM 7 C4' G B 131 -33.678 13.384-126.570 1.00239.79 C
ATOM 8 O4' G B 131 -33.404 14.673-125.959 1.00236.84 O
ATOM 9 C3' G B 131 -34.974 13.661-127.341 1.00238.68 C
ATOM 10 O3' G B 131 -35.695 12.496-127.784 1.00244.24 O
ATOM 11 C2' G B 131 -35.746 14.486-126.311 1.00239.73 C
ATOM 12 O2' G B 131 -36.384 13.761-125.274 1.00247.39 O
ATOM 13 C1' G B 131 -34.630 15.362-125.771 1.00236.97 C
ATOM 14 N9 G B 131 -34.612 16.626-126.492 1.00229.74 N
ATOM 15 C8 G B 131 -33.831 16.991-127.558 1.00224.42 C
ATOM 16 N7 G B 131 -34.056 18.200-127.990 1.00219.30 N
ATOM 17 C5 G B 131 -35.063 18.666-127.159 1.00220.92 C
ATOM 18 C6 G B 131 -35.728 19.919-127.141 1.00217.64 C
ATOM 19 O6 G B 131 -35.549 20.904-127.886 1.00212.14 O
ATOM 20 N1 G B 131 -36.693 19.952-126.118 1.00221.80 N
ATOM 21 C2 G B 131 -36.978 18.920-125.228 1.00228.64 C
ATOM 22 N2 G B 131 -37.940 19.135-124.313 1.00232.17 N
ATOM 23 N3 G B 131 -36.359 17.744-125.247 1.00232.06 N
ATOM 24 C4 G B 131 -35.420 17.698-126.232 1.00227.66 C
ATOM 25 P G B 132 -36.247 12.414-129.295 1.00241.13 P
ATOM 26 OP1 G B 132 -37.238 11.318-129.326 1.00248.29 O
ATOM 27 OP2 G B 132 -35.088 12.348-130.213 1.00237.20 O
ATOM 28 O5' G B 132 -36.980 13.823-129.532 1.00235.57 O
TER
ATOM 2 P C A 4 -43.714 26.270-124.676 1.00197.35 P
ATOM 3 OP1 C A 4 -44.655 27.410-124.611 1.00196.18 O
ATOM 4 OP2 C A 4 -42.387 26.497-125.294 1.00193.12 O
ATOM 5 O5' C A 4 -43.520 25.653-123.203 1.00204.68 O
ATOM 6 C5' C A 4 -43.699 24.257-122.906 1.00211.25 C
ATOM 7 C4' C A 4 -42.386 23.483-122.831 1.00211.99 C
ATOM 8 O4' C A 4 -41.936 23.117-124.160 1.00207.33 O
ATOM 9 C3' C A 4 -41.134 24.177-122.303 1.00210.17 C
ATOM 10 O3' C A 4 -41.154 24.456-120.897 1.00217.47 O
ATOM 11 C2' C A 4 -40.110 23.112-122.679 1.00209.32 C
ATOM 12 O2' C A 4 -40.148 21.953-121.881 1.00216.56 O
ATOM 13 C1' C A 4 -40.566 22.759-124.084 1.00205.62 C
ATOM 14 N1 C A 4 -39.728 23.457-125.119 1.00198.86 N
ATOM 15 C2 C A 4 -38.673 22.760-125.735 1.00197.56 C
ATOM 16 O2 C A 4 -38.476 21.585-125.418 1.00201.76 O
ATOM 17 N3 C A 4 -37.895 23.389-126.661 1.00191.96 N
ATOM 18 C4 C A 4 -38.141 24.670-126.970 1.00187.93 C
ATOM 19 N4 C A 4 -37.367 25.258-127.882 1.00183.44 N
ATOM 20 C5 C A 4 -39.204 25.407-126.361 1.00189.11 C
ATOM 21 C6 C A 4 -39.957 24.770-125.452 1.00194.59 C
ATOM 22 P G A 5 -40.248 25.623-120.244 1.00216.78 P
ATOM 23 OP1 G A 5 -40.942 26.060-119.010 1.00222.56 O
ATOM 24 OP2 G A 5 -39.884 26.629-121.274 1.00209.02 O
ATOM 25 O5' G A 5 -38.923 24.853-119.806 1.00219.24 O
TER
ATOM 1 O3' C B 130 -31.112 15.427-127.717 1.00214.10 O
ATOM 2 P G B 131 -31.600 14.789-129.107 1.00216.42 P
ATOM 3 OP1 G B 131 -30.408 14.216-129.775 1.00216.19 O
ATOM 4 OP2 G B 131 -32.449 15.775-129.822 1.00210.49 O
ATOM 5 O5' G B 131 -32.487 13.527-128.676 1.00225.68 O
ATOM 6 C5' G B 131 -32.455 12.954-127.367 1.00235.23 C
ATOM 7 C4' G B 131 -33.678 13.384-126.570 1.00239.79 C
ATOM 8 O4' G B 131 -33.404 14.673-125.959 1.00236.84 O
ATOM 9 C3' G B 131 -34.974 13.661-127.341 1.00238.68 C
ATOM 10 O3' G B 131 -35.695 12.496-127.784 1.00244.24 O
ATOM 11 C2' G B 131 -35.746 14.486-126.311 1.00239.73 C
ATOM 12 O2' G B 131 -36.384 13.761-125.274 1.00247.39 O
ATOM 13 C1' G B 131 -34.630 15.362-125.771 1.00236.97 C
ATOM 14 N9 G B 131 -34.612 16.626-126.492 1.00229.74 N
ATOM 15 C8 G B 131 -33.831 16.991-127.558 1.00224.42 C
ATOM 16 N7 G B 131 -34.056 18.200-127.990 1.00219.30 N
ATOM 17 C5 G B 131 -35.063 18.666-127.159 1.00220.92 C
ATOM 18 C6 G B 131 -35.728 19.919-127.141 1.00217.64 C
ATOM 19 O6 G B 131 -35.549 20.904-127.886 1.00212.14 O
ATOM 20 N1 G B 131 -36.693 19.952-126.118 1.00221.80 N
ATOM 21 C2 G B 131 -36.978 18.920-125.228 1.00228.64 C
ATOM 22 N2 G B 131 -37.940 19.135-124.313 1.00232.17 N
ATOM 23 N3 G B 131 -36.359 17.744-125.247 1.00232.06 N
ATOM 24 C4 G B 131 -35.420 17.698-126.232 1.00227.66 C
ATOM 25 P G B 132 -36.247 12.414-129.295 1.00241.13 P
ATOM 26 OP1 G B 132 -37.238 11.318-129.326 1.00248.29 O
ATOM 27 OP2 G B 132 -35.088 12.348-130.213 1.00237.20 O
ATOM 28 O5' G B 132 -36.980 13.823-129.532 1.00235.57 O
TER
Atoms:
C2: (-38.673,22.760,-125.735)
OP1: (-44.655,27.410,-124.611)
OP2: (-42.387,26.497,-125.294)
C4: (-38.141,24.670,-126.970)
O5': (-43.520,25.653,-123.203)
C3': (-41.134,24.177,-122.303)
C1': (-40.566,22.759,-124.084)
O4': (-41.936,23.117,-124.160)
C5': (-43.699,24.257,-122.906)
P: (-43.714,26.270,-124.676)
O2: (-38.476,21.585,-125.418)
C4': (-42.386,23.483,-122.831)
C2': (-40.110,23.112,-122.679)
O2': (-40.148,21.953,-121.881)
N1: (-39.728,23.457,-125.119)
N3: (-37.895,23.389,-126.661)
N4: (-37.367,25.258,-127.882)
C6: (-39.957,24.770,-125.452)
C5: (-39.204,25.407,-126.361)
O3': (-41.154,24.456,-120.897)
OP1: (-44.655,27.410,-124.611)
OP2: (-42.387,26.497,-125.294)
C4: (-38.141,24.670,-126.970)
O5': (-43.520,25.653,-123.203)
C3': (-41.134,24.177,-122.303)
C1': (-40.566,22.759,-124.084)
O4': (-41.936,23.117,-124.160)
C5': (-43.699,24.257,-122.906)
P: (-43.714,26.270,-124.676)
O2: (-38.476,21.585,-125.418)
C4': (-42.386,23.483,-122.831)
C2': (-40.110,23.112,-122.679)
O2': (-40.148,21.953,-121.881)
N1: (-39.728,23.457,-125.119)
N3: (-37.895,23.389,-126.661)
N4: (-37.367,25.258,-127.882)
C6: (-39.957,24.770,-125.452)
C5: (-39.204,25.407,-126.361)
O3': (-41.154,24.456,-120.897)
OP1: (-30.408,14.216,-129.775)
OP2: (-32.449,15.775,-129.822)
C3': (-34.974,13.661,-127.341)
C1': (-34.630,15.362,-125.771)
C5': (-32.455,12.954,-127.367)
O6: (-35.549,20.904,-127.886)
O4': (-33.404,14.673,-125.959)
C8: (-33.831,16.991,-127.558)
C2: (-36.978,18.920,-125.228)
C6: (-35.728,19.919,-127.141)
C5: (-35.063,18.666,-127.159)
C4: (-35.420,17.698,-126.232)
P: (-31.600,14.789,-129.107)
C4': (-33.678,13.384,-126.570)
C2': (-35.746,14.486,-126.311)
O2': (-36.384,13.761,-125.274)
N1: (-36.693,19.952,-126.118)
N2: (-37.940,19.135,-124.313)
N3: (-36.359,17.744,-125.247)
N7: (-34.056,18.200,-127.990)
N9: (-34.612,16.626,-126.492)
O5': (-32.487,13.527,-128.676)
O3': (-35.695,12.496,-127.784)
OP2: (-32.449,15.775,-129.822)
C3': (-34.974,13.661,-127.341)
C1': (-34.630,15.362,-125.771)
C5': (-32.455,12.954,-127.367)
O6: (-35.549,20.904,-127.886)
O4': (-33.404,14.673,-125.959)
C8: (-33.831,16.991,-127.558)
C2: (-36.978,18.920,-125.228)
C6: (-35.728,19.919,-127.141)
C5: (-35.063,18.666,-127.159)
C4: (-35.420,17.698,-126.232)
P: (-31.600,14.789,-129.107)
C4': (-33.678,13.384,-126.570)
C2': (-35.746,14.486,-126.311)
O2': (-36.384,13.761,-125.274)
N1: (-36.693,19.952,-126.118)
N2: (-37.940,19.135,-124.313)
N3: (-36.359,17.744,-125.247)
N7: (-34.056,18.200,-127.990)
N9: (-34.612,16.626,-126.492)
O5': (-32.487,13.527,-128.676)
O3': (-35.695,12.496,-127.784)
Image (generated by PyMOL):