Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1989:A1985
Extra
PDB:
ATOM 1 O3' U A1988 -60.390 -51.463 -32.095 1.00 0.01 O
ATOM 2 P C A1989 -59.999 -52.905 -32.585 1.00 0.01 P
ATOM 3 OP1 C A1989 -59.644 -52.830 -34.003 1.00 0.01 O
ATOM 4 OP2 C A1989 -61.076 -53.762 -32.186 1.00 0.01 O
ATOM 5 O5' C A1989 -58.745 -53.249 -31.744 1.00 0.01 O
ATOM 6 C5' C A1989 -58.505 -54.590 -31.378 1.00 0.01 C
ATOM 7 C4' C A1989 -57.135 -54.750 -30.835 1.00 0.01 C
ATOM 8 O4' C A1989 -56.179 -54.380 -31.865 1.00 0.01 O
ATOM 9 C3' C A1989 -56.843 -53.854 -29.669 1.00 0.01 C
ATOM 10 O3' C A1989 -55.830 -54.458 -28.900 1.00 0.01 O
ATOM 11 C2' C A1989 -56.299 -52.614 -30.364 1.00 0.01 C
ATOM 12 O2' C A1989 -55.546 -51.759 -29.544 1.00 0.01 O
ATOM 13 C1' C A1989 -55.450 -53.257 -31.439 1.00 0.01 C
ATOM 14 N1 C A1989 -55.188 -52.425 -32.603 1.00 0.01 N
ATOM 15 C2 C A1989 -53.883 -52.008 -32.793 1.00 0.01 C
ATOM 16 O2 C A1989 -53.030 -52.287 -31.946 1.00 0.01 O
ATOM 17 N3 C A1989 -53.573 -51.304 -33.878 1.00 0.01 N
ATOM 18 C4 C A1989 -54.517 -51.031 -34.751 1.00 0.01 C
ATOM 19 N4 C A1989 -54.158 -50.317 -35.807 1.00 0.01 N
ATOM 20 C5 C A1989 -55.853 -51.453 -34.597 1.00 0.01 C
ATOM 21 C6 C A1989 -56.141 -52.162 -33.512 1.00 0.01 C
ATOM 22 P C A1990 -56.191 -55.534 -27.786 1.00 0.01 P
ATOM 23 OP1 C A1990 -57.375 -56.256 -28.217 1.00 0.01 O
ATOM 24 OP2 C A1990 -56.227 -54.816 -26.499 1.00 0.01 O
ATOM 25 O5' C A1990 -54.941 -56.487 -27.820 1.00 0.01 O
TER
ATOM 1 O3' U B1984 -46.628 -43.501 -27.285 1.00 0.01 O
ATOM 2 P G B1985 -47.295 -44.827 -27.855 1.00 0.01 P
ATOM 3 OP1 G B1985 -46.352 -45.900 -27.645 1.00 0.01 O
ATOM 4 OP2 G B1985 -47.742 -44.560 -29.212 1.00 0.01 O
ATOM 5 O5' G B1985 -48.534 -45.018 -26.922 1.00 0.01 O
ATOM 6 C5' G B1985 -48.365 -45.297 -25.555 1.00 0.01 C
ATOM 7 C4' G B1985 -49.355 -46.309 -25.090 1.00 0.01 C
ATOM 8 O4' G B1985 -49.927 -46.957 -26.239 1.00 0.01 O
ATOM 9 C3' G B1985 -48.794 -47.399 -24.222 1.00 0.01 C
ATOM 10 O3' G B1985 -49.750 -47.743 -23.244 1.00 0.01 O
ATOM 11 C2' G B1985 -48.578 -48.552 -25.182 1.00 0.01 C
ATOM 12 O2' G B1985 -48.662 -49.816 -24.578 1.00 0.01 O
ATOM 13 C1' G B1985 -49.686 -48.336 -26.204 1.00 0.01 C
ATOM 14 N9 G B1985 -49.331 -48.718 -27.560 1.00 0.01 N
ATOM 15 C8 G B1985 -48.197 -48.366 -28.206 1.00 0.01 C
ATOM 16 N7 G B1985 -48.158 -48.798 -29.420 1.00 0.01 N
ATOM 17 C5 G B1985 -49.341 -49.447 -29.587 1.00 0.01 C
ATOM 18 C6 G B1985 -49.834 -50.079 -30.727 1.00 0.01 C
ATOM 19 O6 G B1985 -49.287 -50.171 -31.829 1.00 0.01 O
ATOM 20 N1 G B1985 -51.087 -50.612 -30.487 1.00 0.01 N
ATOM 21 C2 G B1985 -51.760 -50.521 -29.298 1.00 0.01 C
ATOM 22 N2 G B1985 -52.955 -51.109 -29.247 1.00 0.01 N
ATOM 23 N3 G B1985 -51.314 -49.900 -28.224 1.00 0.01 N
ATOM 24 C4 G B1985 -50.094 -49.394 -28.455 1.00 0.01 C
ATOM 25 P U B1986 -49.846 -46.845 -21.935 1.00 0.01 P
ATOM 26 OP1 U B1986 -48.938 -45.729 -22.131 1.00 0.01 O
ATOM 27 OP2 U B1986 -49.640 -47.745 -20.787 1.00 0.01 O
ATOM 28 O5' U B1986 -51.334 -46.314 -21.948 1.00 0.01 O
TER
ATOM 2 P C A1989 -59.999 -52.905 -32.585 1.00 0.01 P
ATOM 3 OP1 C A1989 -59.644 -52.830 -34.003 1.00 0.01 O
ATOM 4 OP2 C A1989 -61.076 -53.762 -32.186 1.00 0.01 O
ATOM 5 O5' C A1989 -58.745 -53.249 -31.744 1.00 0.01 O
ATOM 6 C5' C A1989 -58.505 -54.590 -31.378 1.00 0.01 C
ATOM 7 C4' C A1989 -57.135 -54.750 -30.835 1.00 0.01 C
ATOM 8 O4' C A1989 -56.179 -54.380 -31.865 1.00 0.01 O
ATOM 9 C3' C A1989 -56.843 -53.854 -29.669 1.00 0.01 C
ATOM 10 O3' C A1989 -55.830 -54.458 -28.900 1.00 0.01 O
ATOM 11 C2' C A1989 -56.299 -52.614 -30.364 1.00 0.01 C
ATOM 12 O2' C A1989 -55.546 -51.759 -29.544 1.00 0.01 O
ATOM 13 C1' C A1989 -55.450 -53.257 -31.439 1.00 0.01 C
ATOM 14 N1 C A1989 -55.188 -52.425 -32.603 1.00 0.01 N
ATOM 15 C2 C A1989 -53.883 -52.008 -32.793 1.00 0.01 C
ATOM 16 O2 C A1989 -53.030 -52.287 -31.946 1.00 0.01 O
ATOM 17 N3 C A1989 -53.573 -51.304 -33.878 1.00 0.01 N
ATOM 18 C4 C A1989 -54.517 -51.031 -34.751 1.00 0.01 C
ATOM 19 N4 C A1989 -54.158 -50.317 -35.807 1.00 0.01 N
ATOM 20 C5 C A1989 -55.853 -51.453 -34.597 1.00 0.01 C
ATOM 21 C6 C A1989 -56.141 -52.162 -33.512 1.00 0.01 C
ATOM 22 P C A1990 -56.191 -55.534 -27.786 1.00 0.01 P
ATOM 23 OP1 C A1990 -57.375 -56.256 -28.217 1.00 0.01 O
ATOM 24 OP2 C A1990 -56.227 -54.816 -26.499 1.00 0.01 O
ATOM 25 O5' C A1990 -54.941 -56.487 -27.820 1.00 0.01 O
TER
ATOM 1 O3' U B1984 -46.628 -43.501 -27.285 1.00 0.01 O
ATOM 2 P G B1985 -47.295 -44.827 -27.855 1.00 0.01 P
ATOM 3 OP1 G B1985 -46.352 -45.900 -27.645 1.00 0.01 O
ATOM 4 OP2 G B1985 -47.742 -44.560 -29.212 1.00 0.01 O
ATOM 5 O5' G B1985 -48.534 -45.018 -26.922 1.00 0.01 O
ATOM 6 C5' G B1985 -48.365 -45.297 -25.555 1.00 0.01 C
ATOM 7 C4' G B1985 -49.355 -46.309 -25.090 1.00 0.01 C
ATOM 8 O4' G B1985 -49.927 -46.957 -26.239 1.00 0.01 O
ATOM 9 C3' G B1985 -48.794 -47.399 -24.222 1.00 0.01 C
ATOM 10 O3' G B1985 -49.750 -47.743 -23.244 1.00 0.01 O
ATOM 11 C2' G B1985 -48.578 -48.552 -25.182 1.00 0.01 C
ATOM 12 O2' G B1985 -48.662 -49.816 -24.578 1.00 0.01 O
ATOM 13 C1' G B1985 -49.686 -48.336 -26.204 1.00 0.01 C
ATOM 14 N9 G B1985 -49.331 -48.718 -27.560 1.00 0.01 N
ATOM 15 C8 G B1985 -48.197 -48.366 -28.206 1.00 0.01 C
ATOM 16 N7 G B1985 -48.158 -48.798 -29.420 1.00 0.01 N
ATOM 17 C5 G B1985 -49.341 -49.447 -29.587 1.00 0.01 C
ATOM 18 C6 G B1985 -49.834 -50.079 -30.727 1.00 0.01 C
ATOM 19 O6 G B1985 -49.287 -50.171 -31.829 1.00 0.01 O
ATOM 20 N1 G B1985 -51.087 -50.612 -30.487 1.00 0.01 N
ATOM 21 C2 G B1985 -51.760 -50.521 -29.298 1.00 0.01 C
ATOM 22 N2 G B1985 -52.955 -51.109 -29.247 1.00 0.01 N
ATOM 23 N3 G B1985 -51.314 -49.900 -28.224 1.00 0.01 N
ATOM 24 C4 G B1985 -50.094 -49.394 -28.455 1.00 0.01 C
ATOM 25 P U B1986 -49.846 -46.845 -21.935 1.00 0.01 P
ATOM 26 OP1 U B1986 -48.938 -45.729 -22.131 1.00 0.01 O
ATOM 27 OP2 U B1986 -49.640 -47.745 -20.787 1.00 0.01 O
ATOM 28 O5' U B1986 -51.334 -46.314 -21.948 1.00 0.01 O
TER
Atoms:
C2: (-53.883,-52.008,-32.793)
OP1: (-59.644,-52.830,-34.003)
OP2: (-61.076,-53.762,-32.186)
C4: (-54.517,-51.031,-34.751)
O5': (-58.745,-53.249,-31.744)
C3': (-56.843,-53.854,-29.669)
C1': (-55.450,-53.257,-31.439)
O4': (-56.179,-54.380,-31.865)
C5': (-58.505,-54.590,-31.378)
P: (-59.999,-52.905,-32.585)
O2: (-53.030,-52.287,-31.946)
C4': (-57.135,-54.750,-30.835)
C2': (-56.299,-52.614,-30.364)
O2': (-55.546,-51.759,-29.544)
N1: (-55.188,-52.425,-32.603)
N3: (-53.573,-51.304,-33.878)
N4: (-54.158,-50.317,-35.807)
C6: (-56.141,-52.162,-33.512)
C5: (-55.853,-51.453,-34.597)
O3': (-55.830,-54.458,-28.900)
OP1: (-59.644,-52.830,-34.003)
OP2: (-61.076,-53.762,-32.186)
C4: (-54.517,-51.031,-34.751)
O5': (-58.745,-53.249,-31.744)
C3': (-56.843,-53.854,-29.669)
C1': (-55.450,-53.257,-31.439)
O4': (-56.179,-54.380,-31.865)
C5': (-58.505,-54.590,-31.378)
P: (-59.999,-52.905,-32.585)
O2: (-53.030,-52.287,-31.946)
C4': (-57.135,-54.750,-30.835)
C2': (-56.299,-52.614,-30.364)
O2': (-55.546,-51.759,-29.544)
N1: (-55.188,-52.425,-32.603)
N3: (-53.573,-51.304,-33.878)
N4: (-54.158,-50.317,-35.807)
C6: (-56.141,-52.162,-33.512)
C5: (-55.853,-51.453,-34.597)
O3': (-55.830,-54.458,-28.900)
OP1: (-46.352,-45.900,-27.645)
OP2: (-47.742,-44.560,-29.212)
C3': (-48.794,-47.399,-24.222)
C1': (-49.686,-48.336,-26.204)
C5': (-48.365,-45.297,-25.555)
O6: (-49.287,-50.171,-31.829)
O4': (-49.927,-46.957,-26.239)
C8: (-48.197,-48.366,-28.206)
C2: (-51.760,-50.521,-29.298)
C6: (-49.834,-50.079,-30.727)
C5: (-49.341,-49.447,-29.587)
C4: (-50.094,-49.394,-28.455)
P: (-47.295,-44.827,-27.855)
C4': (-49.355,-46.309,-25.090)
C2': (-48.578,-48.552,-25.182)
O2': (-48.662,-49.816,-24.578)
N1: (-51.087,-50.612,-30.487)
N2: (-52.955,-51.109,-29.247)
N3: (-51.314,-49.900,-28.224)
N7: (-48.158,-48.798,-29.420)
N9: (-49.331,-48.718,-27.560)
O5': (-48.534,-45.018,-26.922)
O3': (-49.750,-47.743,-23.244)
OP2: (-47.742,-44.560,-29.212)
C3': (-48.794,-47.399,-24.222)
C1': (-49.686,-48.336,-26.204)
C5': (-48.365,-45.297,-25.555)
O6: (-49.287,-50.171,-31.829)
O4': (-49.927,-46.957,-26.239)
C8: (-48.197,-48.366,-28.206)
C2: (-51.760,-50.521,-29.298)
C6: (-49.834,-50.079,-30.727)
C5: (-49.341,-49.447,-29.587)
C4: (-50.094,-49.394,-28.455)
P: (-47.295,-44.827,-27.855)
C4': (-49.355,-46.309,-25.090)
C2': (-48.578,-48.552,-25.182)
O2': (-48.662,-49.816,-24.578)
N1: (-51.087,-50.612,-30.487)
N2: (-52.955,-51.109,-29.247)
N3: (-51.314,-49.900,-28.224)
N7: (-48.158,-48.798,-29.420)
N9: (-49.331,-48.718,-27.560)
O5': (-48.534,-45.018,-26.922)
O3': (-49.750,-47.743,-23.244)
Image (generated by PyMOL):