ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MZP:B37:B9

Extra

PDB:
ATOM 1 O3' G A 36 5.542 72.834 6.615 1.00 50.28 O
ATOM 2 P U A 37 6.943 73.585 6.856 1.00 50.56 P
ATOM 3 OP1 U A 37 6.617 75.038 6.917 1.00 52.15 O
ATOM 4 OP2 U A 37 7.967 73.102 5.898 1.00 49.09 O
ATOM 5 O5' U A 37 7.383 73.115 8.310 1.00 48.13 O
ATOM 6 C5' U A 37 6.772 73.673 9.461 1.00 44.76 C
ATOM 7 C4' U A 37 7.369 73.072 10.700 1.00 42.99 C
ATOM 8 O4' U A 37 7.105 71.648 10.697 1.00 42.23 O
ATOM 9 C3' U A 37 8.879 73.154 10.783 1.00 43.05 C
ATOM 10 O3' U A 37 9.299 74.426 11.261 1.00 42.68 O
ATOM 11 C2' U A 37 9.205 72.015 11.743 1.00 42.61 C
ATOM 12 O2' U A 37 9.008 72.360 13.101 1.00 41.59 O
ATOM 13 C1' U A 37 8.180 70.960 11.313 1.00 41.73 C
ATOM 14 N1 U A 37 8.703 69.974 10.354 1.00 38.98 N
ATOM 15 C2 U A 37 9.288 68.839 10.863 1.00 36.06 C
ATOM 16 O2 U A 37 9.363 68.627 12.054 1.00 36.55 O
ATOM 17 N3 U A 37 9.777 67.961 9.925 1.00 33.95 N
ATOM 18 C4 U A 37 9.738 68.108 8.551 1.00 33.38 C
ATOM 19 O4 U A 37 10.285 67.272 7.830 1.00 27.95 O
ATOM 20 C5 U A 37 9.102 69.306 8.106 1.00 34.76 C
ATOM 21 C6 U A 37 8.618 70.176 9.001 1.00 37.23 C
ATOM 22 P G A 38 10.689 75.039 10.744 1.00 43.65 P
ATOM 23 OP1 G A 38 10.906 76.386 11.332 1.00 44.17 O
ATOM 24 OP2 G A 38 10.715 74.867 9.273 1.00 43.11 O
ATOM 25 O5' G A 38 11.770 74.066 11.380 1.00 42.64 O
TER

ATOM 1 O3' U B 8 9.097 75.786 21.446 1.00 46.17 O
ATOM 2 P A B 9 7.701 75.120 21.016 1.00 46.26 P
ATOM 3 OP1 A B 9 6.629 76.135 21.158 1.00 49.37 O
ATOM 4 OP2 A B 9 7.575 73.809 21.718 1.00 48.32 O
ATOM 5 O5' A B 9 7.875 74.843 19.463 1.00 45.20 O
ATOM 6 C5' A B 9 7.951 75.916 18.546 1.00 42.60 C
ATOM 7 C4' A B 9 8.144 75.386 17.156 1.00 42.02 C
ATOM 8 O4' A B 9 9.454 74.771 17.042 1.00 41.91 O
ATOM 9 C3' A B 9 7.199 74.274 16.756 1.00 41.18 C
ATOM 10 O3' A B 9 5.954 74.801 16.348 1.00 40.93 O
ATOM 11 C2' A B 9 7.957 73.643 15.597 1.00 41.15 C
ATOM 12 O2' A B 9 7.884 74.424 14.421 1.00 40.37 O
ATOM 13 C1' A B 9 9.389 73.683 16.129 1.00 40.99 C
ATOM 14 N9 A B 9 9.790 72.465 16.835 1.00 38.71 N
ATOM 15 C8 A B 9 9.853 72.261 18.191 1.00 38.34 C
ATOM 16 N7 A B 9 10.269 71.064 18.529 1.00 36.89 N
ATOM 17 C5 A B 9 10.488 70.434 17.312 1.00 35.97 C
ATOM 18 C6 A B 9 10.948 69.145 16.983 1.00 34.22 C
ATOM 19 N6 A B 9 11.263 68.222 17.892 1.00 32.37 N
ATOM 20 N1 A B 9 11.073 68.837 15.674 1.00 32.94 N
ATOM 21 C2 A B 9 10.754 69.765 14.764 1.00 34.51 C
ATOM 22 N3 A B 9 10.308 71.010 14.948 1.00 37.68 N
ATOM 23 C4 A B 9 10.196 71.285 16.260 1.00 36.57 C
ATOM 24 P G B 10 4.650 73.868 16.376 1.00 43.91 P
ATOM 25 OP1 G B 10 3.637 74.508 15.497 1.00 43.21 O
ATOM 26 OP2 G B 10 4.303 73.545 17.788 1.00 42.43 O
ATOM 27 O5' G B 10 5.130 72.507 15.705 1.00 45.71 O
TER

Atoms:
C4: (9.738,68.108,8.551)
N3: (9.777,67.961,9.925)
OP1: (6.617,75.038,6.917)
OP2: (7.967,73.102,5.898)
C2: (9.288,68.839,10.863)
C1': (8.180,70.960,11.313)
C3': (8.879,73.154,10.783)
O5': (7.383,73.115,8.310)
O4': (7.105,71.648,10.697)
C5': (6.772,73.673,9.461)
P: (6.943,73.585,6.856)
C4': (7.369,73.072,10.700)
C2': (9.205,72.015,11.743)
O2': (9.008,72.360,13.101)
N1: (8.703,69.974,10.354)
O4: (10.285,67.272,7.830)
O2: (9.363,68.627,12.054)
C6: (8.618,70.176,9.001)
C5: (9.102,69.306,8.106)
O3': (9.299,74.426,11.261)
OP1: (6.629,76.135,21.158)
OP2: (7.575,73.809,21.718)
C3': (7.199,74.274,16.756)
C1': (9.389,73.683,16.129)
C5': (7.951,75.916,18.546)
O4': (9.454,74.771,17.042)
C8: (9.853,72.261,18.191)
O2': (7.884,74.424,14.421)
C6: (10.948,69.145,16.983)
C5: (10.488,70.434,17.312)
C4: (10.196,71.285,16.260)
P: (7.701,75.120,21.016)
C4': (8.144,75.386,17.156)
C2': (7.957,73.643,15.597)
C2: (10.754,69.765,14.764)
N1: (11.073,68.837,15.674)
N3: (10.308,71.010,14.948)
N6: (11.263,68.222,17.892)
N7: (10.269,71.064,18.529)
N9: (9.790,72.465,16.835)
O5': (7.875,74.843,19.463)
O3': (5.954,74.801,16.348)
Image (generated by PyMOL):
PyMOL image
show in jmol