Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A119:A135
Extra
PDB:
ATOM 1 O3' C A 118 85.183 147.205 25.549 1.00 58.20 O
ATOM 2 P A A 119 86.779 147.308 25.428 1.00 55.14 P
ATOM 3 OP1 A A 119 86.997 148.718 25.046 1.00 54.68 O
ATOM 4 OP2 A A 119 87.333 146.230 24.568 1.00 54.42 O
ATOM 5 O5' A A 119 87.304 147.019 26.903 1.00 52.05 O
ATOM 6 C5' A A 119 87.587 148.082 27.821 1.00 49.88 C
ATOM 7 C4' A A 119 87.543 147.571 29.239 1.00 48.97 C
ATOM 8 O4' A A 119 86.188 147.536 29.737 1.00 47.96 O
ATOM 9 C3' A A 119 88.045 146.152 29.384 1.00 48.41 C
ATOM 10 O3' A A 119 89.432 146.180 29.527 1.00 48.86 O
ATOM 11 C2' A A 119 87.361 145.701 30.654 1.00 48.69 C
ATOM 12 O2' A A 119 87.983 146.302 31.784 1.00 49.21 O
ATOM 13 C1' A A 119 85.982 146.331 30.450 1.00 48.38 C
ATOM 14 N9 A A 119 85.053 145.517 29.660 1.00 48.13 N
ATOM 15 C8 A A 119 84.517 145.821 28.430 1.00 47.69 C
ATOM 16 N7 A A 119 83.632 144.957 28.015 1.00 47.33 N
ATOM 17 C5 A A 119 83.596 144.007 29.020 1.00 47.46 C
ATOM 18 C6 A A 119 82.836 142.845 29.186 1.00 46.72 C
ATOM 19 N6 A A 119 81.930 142.432 28.310 1.00 45.56 N
ATOM 20 N1 A A 119 83.040 142.113 30.297 1.00 46.57 N
ATOM 21 C2 A A 119 83.960 142.527 31.170 1.00 47.78 C
ATOM 22 N3 A A 119 84.738 143.604 31.128 1.00 48.37 N
ATOM 23 C4 A A 119 84.494 144.317 30.020 1.00 48.08 C
ATOM 24 P A A 120 90.313 145.101 28.768 1.00 50.25 P
ATOM 25 OP1 A A 120 91.700 145.270 29.235 1.00 52.33 O
ATOM 26 OP2 A A 120 89.998 145.188 27.314 1.00 50.33 O
ATOM 27 O5' A A 120 89.808 143.736 29.390 1.00 51.40 O
TER
ATOM 1 O3' U B 134 77.539 133.502 27.246 1.00 44.27 O
ATOM 2 P G B 135 76.197 133.994 28.000 1.00 45.32 P
ATOM 3 OP1 G B 135 75.564 132.742 28.477 1.00 46.59 O
ATOM 4 OP2 G B 135 75.383 134.979 27.219 1.00 43.76 O
ATOM 5 O5' G B 135 76.737 134.750 29.289 1.00 44.89 O
ATOM 6 C5' G B 135 77.743 134.159 30.107 1.00 43.21 C
ATOM 7 C4' G B 135 78.303 135.198 31.024 1.00 43.09 C
ATOM 8 O4' G B 135 79.047 136.182 30.247 1.00 43.01 O
ATOM 9 C3' G B 135 77.232 135.975 31.778 1.00 42.88 C
ATOM 10 O3' G B 135 77.707 136.214 33.090 1.00 42.06 O
ATOM 11 C2' G B 135 77.183 137.293 31.014 1.00 43.33 C
ATOM 12 O2' G B 135 76.666 138.322 31.838 1.00 44.92 O
ATOM 13 C1' G B 135 78.661 137.467 30.646 1.00 43.79 C
ATOM 14 N9 G B 135 78.995 138.391 29.564 1.00 46.54 N
ATOM 15 C8 G B 135 79.986 139.349 29.575 1.00 47.71 C
ATOM 16 N7 G B 135 79.996 140.087 28.496 1.00 48.09 N
ATOM 17 C5 G B 135 78.960 139.576 27.723 1.00 46.86 C
ATOM 18 C6 G B 135 78.448 139.995 26.474 1.00 47.31 C
ATOM 19 O6 G B 135 78.794 140.952 25.778 1.00 48.92 O
ATOM 20 N1 G B 135 77.403 139.187 26.057 1.00 47.29 N
ATOM 21 C2 G B 135 76.896 138.125 26.761 1.00 47.13 C
ATOM 22 N2 G B 135 75.874 137.460 26.202 1.00 48.62 N
ATOM 23 N3 G B 135 77.347 137.739 27.929 1.00 46.69 N
ATOM 24 C4 G B 135 78.363 138.504 28.352 1.00 46.46 C
ATOM 25 P A B 136 77.304 135.215 34.273 1.00 41.22 P
ATOM 26 OP1 A B 136 78.277 135.412 35.365 1.00 40.63 O
ATOM 27 OP2 A B 136 77.146 133.858 33.674 1.00 41.02 O
ATOM 28 O5' A B 136 75.898 135.772 34.773 1.00 39.98 O
TER
ATOM 2 P A A 119 86.779 147.308 25.428 1.00 55.14 P
ATOM 3 OP1 A A 119 86.997 148.718 25.046 1.00 54.68 O
ATOM 4 OP2 A A 119 87.333 146.230 24.568 1.00 54.42 O
ATOM 5 O5' A A 119 87.304 147.019 26.903 1.00 52.05 O
ATOM 6 C5' A A 119 87.587 148.082 27.821 1.00 49.88 C
ATOM 7 C4' A A 119 87.543 147.571 29.239 1.00 48.97 C
ATOM 8 O4' A A 119 86.188 147.536 29.737 1.00 47.96 O
ATOM 9 C3' A A 119 88.045 146.152 29.384 1.00 48.41 C
ATOM 10 O3' A A 119 89.432 146.180 29.527 1.00 48.86 O
ATOM 11 C2' A A 119 87.361 145.701 30.654 1.00 48.69 C
ATOM 12 O2' A A 119 87.983 146.302 31.784 1.00 49.21 O
ATOM 13 C1' A A 119 85.982 146.331 30.450 1.00 48.38 C
ATOM 14 N9 A A 119 85.053 145.517 29.660 1.00 48.13 N
ATOM 15 C8 A A 119 84.517 145.821 28.430 1.00 47.69 C
ATOM 16 N7 A A 119 83.632 144.957 28.015 1.00 47.33 N
ATOM 17 C5 A A 119 83.596 144.007 29.020 1.00 47.46 C
ATOM 18 C6 A A 119 82.836 142.845 29.186 1.00 46.72 C
ATOM 19 N6 A A 119 81.930 142.432 28.310 1.00 45.56 N
ATOM 20 N1 A A 119 83.040 142.113 30.297 1.00 46.57 N
ATOM 21 C2 A A 119 83.960 142.527 31.170 1.00 47.78 C
ATOM 22 N3 A A 119 84.738 143.604 31.128 1.00 48.37 N
ATOM 23 C4 A A 119 84.494 144.317 30.020 1.00 48.08 C
ATOM 24 P A A 120 90.313 145.101 28.768 1.00 50.25 P
ATOM 25 OP1 A A 120 91.700 145.270 29.235 1.00 52.33 O
ATOM 26 OP2 A A 120 89.998 145.188 27.314 1.00 50.33 O
ATOM 27 O5' A A 120 89.808 143.736 29.390 1.00 51.40 O
TER
ATOM 1 O3' U B 134 77.539 133.502 27.246 1.00 44.27 O
ATOM 2 P G B 135 76.197 133.994 28.000 1.00 45.32 P
ATOM 3 OP1 G B 135 75.564 132.742 28.477 1.00 46.59 O
ATOM 4 OP2 G B 135 75.383 134.979 27.219 1.00 43.76 O
ATOM 5 O5' G B 135 76.737 134.750 29.289 1.00 44.89 O
ATOM 6 C5' G B 135 77.743 134.159 30.107 1.00 43.21 C
ATOM 7 C4' G B 135 78.303 135.198 31.024 1.00 43.09 C
ATOM 8 O4' G B 135 79.047 136.182 30.247 1.00 43.01 O
ATOM 9 C3' G B 135 77.232 135.975 31.778 1.00 42.88 C
ATOM 10 O3' G B 135 77.707 136.214 33.090 1.00 42.06 O
ATOM 11 C2' G B 135 77.183 137.293 31.014 1.00 43.33 C
ATOM 12 O2' G B 135 76.666 138.322 31.838 1.00 44.92 O
ATOM 13 C1' G B 135 78.661 137.467 30.646 1.00 43.79 C
ATOM 14 N9 G B 135 78.995 138.391 29.564 1.00 46.54 N
ATOM 15 C8 G B 135 79.986 139.349 29.575 1.00 47.71 C
ATOM 16 N7 G B 135 79.996 140.087 28.496 1.00 48.09 N
ATOM 17 C5 G B 135 78.960 139.576 27.723 1.00 46.86 C
ATOM 18 C6 G B 135 78.448 139.995 26.474 1.00 47.31 C
ATOM 19 O6 G B 135 78.794 140.952 25.778 1.00 48.92 O
ATOM 20 N1 G B 135 77.403 139.187 26.057 1.00 47.29 N
ATOM 21 C2 G B 135 76.896 138.125 26.761 1.00 47.13 C
ATOM 22 N2 G B 135 75.874 137.460 26.202 1.00 48.62 N
ATOM 23 N3 G B 135 77.347 137.739 27.929 1.00 46.69 N
ATOM 24 C4 G B 135 78.363 138.504 28.352 1.00 46.46 C
ATOM 25 P A B 136 77.304 135.215 34.273 1.00 41.22 P
ATOM 26 OP1 A B 136 78.277 135.412 35.365 1.00 40.63 O
ATOM 27 OP2 A B 136 77.146 133.858 33.674 1.00 41.02 O
ATOM 28 O5' A B 136 75.898 135.772 34.773 1.00 39.98 O
TER
Atoms:
OP1: (86.997,148.718,25.046)
OP2: (87.333,146.230,24.568)
C3': (88.045,146.152,29.384)
C1': (85.982,146.331,30.450)
C5': (87.587,148.082,27.821)
O4': (86.188,147.536,29.737)
C8: (84.517,145.821,28.430)
O2': (87.983,146.302,31.784)
C6: (82.836,142.845,29.186)
C5: (83.596,144.007,29.020)
C4: (84.494,144.317,30.020)
P: (86.779,147.308,25.428)
C4': (87.543,147.571,29.239)
C2': (87.361,145.701,30.654)
C2: (83.960,142.527,31.170)
N1: (83.040,142.113,30.297)
N3: (84.738,143.604,31.128)
N6: (81.930,142.432,28.310)
N7: (83.632,144.957,28.015)
N9: (85.053,145.517,29.660)
O5': (87.304,147.019,26.903)
O3': (89.432,146.180,29.527)
OP2: (87.333,146.230,24.568)
C3': (88.045,146.152,29.384)
C1': (85.982,146.331,30.450)
C5': (87.587,148.082,27.821)
O4': (86.188,147.536,29.737)
C8: (84.517,145.821,28.430)
O2': (87.983,146.302,31.784)
C6: (82.836,142.845,29.186)
C5: (83.596,144.007,29.020)
C4: (84.494,144.317,30.020)
P: (86.779,147.308,25.428)
C4': (87.543,147.571,29.239)
C2': (87.361,145.701,30.654)
C2: (83.960,142.527,31.170)
N1: (83.040,142.113,30.297)
N3: (84.738,143.604,31.128)
N6: (81.930,142.432,28.310)
N7: (83.632,144.957,28.015)
N9: (85.053,145.517,29.660)
O5': (87.304,147.019,26.903)
O3': (89.432,146.180,29.527)
OP1: (75.564,132.742,28.477)
OP2: (75.383,134.979,27.219)
C3': (77.232,135.975,31.778)
C1': (78.661,137.467,30.646)
C5': (77.743,134.159,30.107)
O6: (78.794,140.952,25.778)
O4': (79.047,136.182,30.247)
C8: (79.986,139.349,29.575)
C2: (76.896,138.125,26.761)
C6: (78.448,139.995,26.474)
C5: (78.960,139.576,27.723)
C4: (78.363,138.504,28.352)
P: (76.197,133.994,28.000)
C4': (78.303,135.198,31.024)
C2': (77.183,137.293,31.014)
O2': (76.666,138.322,31.838)
N1: (77.403,139.187,26.057)
N2: (75.874,137.460,26.202)
N3: (77.347,137.739,27.929)
N7: (79.996,140.087,28.496)
N9: (78.995,138.391,29.564)
O5': (76.737,134.750,29.289)
O3': (77.707,136.214,33.090)
OP2: (75.383,134.979,27.219)
C3': (77.232,135.975,31.778)
C1': (78.661,137.467,30.646)
C5': (77.743,134.159,30.107)
O6: (78.794,140.952,25.778)
O4': (79.047,136.182,30.247)
C8: (79.986,139.349,29.575)
C2: (76.896,138.125,26.761)
C6: (78.448,139.995,26.474)
C5: (78.960,139.576,27.723)
C4: (78.363,138.504,28.352)
P: (76.197,133.994,28.000)
C4': (78.303,135.198,31.024)
C2': (77.183,137.293,31.014)
O2': (76.666,138.322,31.838)
N1: (77.403,139.187,26.057)
N2: (75.874,137.460,26.202)
N3: (77.347,137.739,27.929)
N7: (79.996,140.087,28.496)
N9: (78.995,138.391,29.564)
O5': (76.737,134.750,29.289)
O3': (77.707,136.214,33.090)
Image (generated by PyMOL):