ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02249:02220

Extra

PDB:
ATOM 1 O3' G A2248 70.523 44.466 58.274 1.00 58.11 O
ATOM 2 P A A2249 71.019 43.038 58.843 1.00 56.03 P
ATOM 3 OP1 A A2249 71.256 42.204 57.635 1.00 57.46 O
ATOM 4 OP2 A A2249 70.092 42.565 59.900 1.00 55.34 O
ATOM 5 O5' A A2249 72.418 43.354 59.528 1.00 54.36 O
ATOM 6 C5' A A2249 73.435 44.083 58.815 1.00 52.95 C
ATOM 7 C4' A A2249 74.507 44.547 59.768 1.00 53.54 C
ATOM 8 O4' A A2249 73.972 45.549 60.672 1.00 52.72 O
ATOM 9 C3' A A2249 75.058 43.480 60.695 1.00 53.66 C
ATOM 10 O3' A A2249 76.018 42.664 60.020 1.00 56.82 O
ATOM 11 C2' A A2249 75.650 44.316 61.823 1.00 51.86 C
ATOM 12 O2' A A2249 76.903 44.864 61.487 1.00 53.23 O
ATOM 13 C1' A A2249 74.628 45.453 61.928 1.00 51.79 C
ATOM 14 N9 A A2249 73.621 45.252 62.975 1.00 49.46 N
ATOM 15 C8 A A2249 72.417 44.604 62.860 1.00 49.21 C
ATOM 16 N7 A A2249 71.733 44.555 63.976 1.00 48.09 N
ATOM 17 C5 A A2249 72.537 45.220 64.890 1.00 46.46 C
ATOM 18 C6 A A2249 72.374 45.505 66.255 1.00 46.09 C
ATOM 19 N6 A A2249 71.310 45.127 66.962 1.00 44.43 N
ATOM 20 N1 A A2249 73.354 46.195 66.875 1.00 44.81 N
ATOM 21 C2 A A2249 74.421 46.562 66.164 1.00 43.41 C
ATOM 22 N3 A A2249 74.693 46.349 64.879 1.00 45.16 N
ATOM 23 C4 A A2249 73.699 45.663 64.289 1.00 46.45 C
ATOM 24 P C A2250 76.574 41.326 60.727 1.00 58.97 P
ATOM 25 OP1 C A2250 77.610 40.749 59.825 1.00 59.09 O
ATOM 26 OP2 C A2250 75.420 40.488 61.153 1.00 58.33 O
ATOM 27 O5' C A2250 77.307 41.891 62.022 1.00 56.96 O
TER

ATOM 1 O3' U B2219 81.350 48.174 70.038 1.00 58.05 O
ATOM 2 P G B2220 80.190 48.514 68.972 1.00 58.57 P
ATOM 3 OP1 G B2220 79.827 47.291 68.217 1.00 58.04 O
ATOM 4 OP2 G B2220 80.638 49.724 68.232 1.00 59.49 O
ATOM 5 O5' G B2220 78.942 48.908 69.891 1.00 55.95 O
ATOM 6 C5' G B2220 78.921 50.150 70.616 1.00 53.45 C
ATOM 7 C4' G B2220 77.917 50.104 71.753 1.00 52.02 C
ATOM 8 O4' G B2220 76.579 49.905 71.222 1.00 51.55 O
ATOM 9 C3' G B2220 78.107 49.037 72.831 1.00 52.89 C
ATOM 10 O3' G B2220 77.776 49.590 74.104 1.00 52.16 O
ATOM 11 C2' G B2220 77.048 47.999 72.463 1.00 52.39 C
ATOM 12 O2' G B2220 76.600 47.242 73.570 1.00 53.10 O
ATOM 13 C1' G B2220 75.925 48.898 71.966 1.00 51.09 C
ATOM 14 N9 G B2220 74.927 48.248 71.119 1.00 50.54 N
ATOM 15 C8 G B2220 75.131 47.660 69.896 1.00 50.25 C
ATOM 16 N7 G B2220 74.038 47.175 69.372 1.00 50.36 N
ATOM 17 C5 G B2220 73.050 47.455 70.306 1.00 49.91 C
ATOM 18 C6 G B2220 71.658 47.172 70.286 1.00 49.89 C
ATOM 19 O6 G B2220 70.999 46.606 69.412 1.00 49.75 O
ATOM 20 N1 G B2220 71.026 47.631 71.433 1.00 49.97 N
ATOM 21 C2 G B2220 71.642 48.285 72.466 1.00 49.92 C
ATOM 22 N2 G B2220 70.845 48.659 73.479 1.00 48.17 N
ATOM 23 N3 G B2220 72.940 48.555 72.502 1.00 51.30 N
ATOM 24 C4 G B2220 73.580 48.114 71.393 1.00 50.47 C
ATOM 25 P A B2221 78.910 50.333 74.969 1.00 53.20 P
ATOM 26 OP1 A B2221 80.221 49.681 74.725 1.00 54.57 O
ATOM 27 OP2 A B2221 78.410 50.466 76.357 1.00 51.73 O
ATOM 28 O5' A B2221 78.966 51.791 74.326 1.00 53.47 O
TER

Atoms:
OP1: (71.256,42.204,57.635)
OP2: (70.092,42.565,59.900)
C3': (75.058,43.480,60.695)
C1': (74.628,45.453,61.928)
C5': (73.435,44.083,58.815)
O4': (73.972,45.549,60.672)
C8: (72.417,44.604,62.860)
O2': (76.903,44.864,61.487)
C6: (72.374,45.505,66.255)
C5: (72.537,45.220,64.890)
C4: (73.699,45.663,64.289)
P: (71.019,43.038,58.843)
C4': (74.507,44.547,59.768)
C2': (75.650,44.316,61.823)
C2: (74.421,46.562,66.164)
N1: (73.354,46.195,66.875)
N3: (74.693,46.349,64.879)
N6: (71.310,45.127,66.962)
N7: (71.733,44.555,63.976)
N9: (73.621,45.252,62.975)
O5': (72.418,43.354,59.528)
O3': (76.018,42.664,60.020)
OP1: (79.827,47.291,68.217)
OP2: (80.638,49.724,68.232)
C3': (78.107,49.037,72.831)
C1': (75.925,48.898,71.966)
C5': (78.921,50.150,70.616)
O6: (70.999,46.606,69.412)
O4': (76.579,49.905,71.222)
C8: (75.131,47.660,69.896)
C2: (71.642,48.285,72.466)
C6: (71.658,47.172,70.286)
C5: (73.050,47.455,70.306)
C4: (73.580,48.114,71.393)
P: (80.190,48.514,68.972)
C4': (77.917,50.104,71.753)
C2': (77.048,47.999,72.463)
O2': (76.600,47.242,73.570)
N1: (71.026,47.631,71.433)
N2: (70.845,48.659,73.479)
N3: (72.940,48.555,72.502)
N7: (74.038,47.175,69.372)
N9: (74.927,48.248,71.119)
O5': (78.942,48.908,69.891)
O3': (77.776,49.590,74.104)
Image (generated by PyMOL):
PyMOL image
show in jmol