ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0119:0135

Extra

PDB:
ATOM 1 O3' C A 118 85.141 147.244 25.264 1.00 56.10 O
ATOM 2 P A A 119 86.722 147.501 25.227 1.00 53.65 P
ATOM 3 OP1 A A 119 86.908 148.948 25.018 1.00 53.97 O
ATOM 4 OP2 A A 119 87.349 146.542 24.288 1.00 53.85 O
ATOM 5 O5' A A 119 87.206 147.119 26.695 1.00 51.96 O
ATOM 6 C5' A A 119 87.649 148.119 27.633 1.00 48.86 C
ATOM 7 C4' A A 119 87.595 147.561 29.031 1.00 47.94 C
ATOM 8 O4' A A 119 86.214 147.440 29.449 1.00 48.91 O
ATOM 9 C3' A A 119 88.160 146.158 29.134 1.00 47.44 C
ATOM 10 O3' A A 119 89.556 146.195 29.337 1.00 47.71 O
ATOM 11 C2' A A 119 87.401 145.563 30.310 1.00 48.53 C
ATOM 12 O2' A A 119 87.923 145.944 31.568 1.00 49.00 O
ATOM 13 C1' A A 119 86.026 146.207 30.128 1.00 48.81 C
ATOM 14 N9 A A 119 85.061 145.411 29.367 1.00 47.65 N
ATOM 15 C8 A A 119 84.496 145.719 28.153 1.00 46.68 C
ATOM 16 N7 A A 119 83.594 144.860 27.756 1.00 47.11 N
ATOM 17 C5 A A 119 83.574 143.908 28.765 1.00 48.56 C
ATOM 18 C6 A A 119 82.808 142.744 28.951 1.00 48.50 C
ATOM 19 N6 A A 119 81.864 142.338 28.102 1.00 47.54 N
ATOM 20 N1 A A 119 83.044 142.008 30.058 1.00 49.10 N
ATOM 21 C2 A A 119 83.982 142.428 30.918 1.00 49.21 C
ATOM 22 N3 A A 119 84.756 143.509 30.860 1.00 48.79 N
ATOM 23 C4 A A 119 84.495 144.219 29.749 1.00 48.19 C
ATOM 24 P A A 120 90.481 145.113 28.620 1.00 48.41 P
ATOM 25 OP1 A A 120 91.880 145.260 29.107 1.00 49.56 O
ATOM 26 OP2 A A 120 90.190 145.172 27.166 1.00 47.18 O
ATOM 27 O5' A A 120 89.943 143.739 29.196 1.00 49.53 O
TER

ATOM 1 O3' U B 134 77.557 133.497 26.963 1.00 37.98 O
ATOM 2 P G B 135 76.195 133.912 27.715 1.00 40.56 P
ATOM 3 OP1 G B 135 75.552 132.640 28.145 1.00 44.03 O
ATOM 4 OP2 G B 135 75.399 134.890 26.938 1.00 39.65 O
ATOM 5 O5' G B 135 76.729 134.649 29.020 1.00 42.59 O
ATOM 6 C5' G B 135 77.820 134.096 29.774 1.00 40.28 C
ATOM 7 C4' G B 135 78.364 135.123 30.729 1.00 42.58 C
ATOM 8 O4' G B 135 79.140 136.117 30.001 1.00 45.55 O
ATOM 9 C3' G B 135 77.319 135.897 31.530 1.00 42.32 C
ATOM 10 O3' G B 135 77.832 136.138 32.829 1.00 41.01 O
ATOM 11 C2' G B 135 77.237 137.217 30.774 1.00 42.55 C
ATOM 12 O2' G B 135 76.798 138.284 31.587 1.00 41.88 O
ATOM 13 C1' G B 135 78.697 137.402 30.371 1.00 44.80 C
ATOM 14 N9 G B 135 78.955 138.338 29.280 1.00 47.77 N
ATOM 15 C8 G B 135 79.917 139.315 29.274 1.00 47.57 C
ATOM 16 N7 G B 135 79.883 140.063 28.207 1.00 49.00 N
ATOM 17 C5 G B 135 78.844 139.542 27.451 1.00 49.51 C
ATOM 18 C6 G B 135 78.314 139.966 26.204 1.00 49.19 C
ATOM 19 O6 G B 135 78.656 140.923 25.506 1.00 49.57 O
ATOM 20 N1 G B 135 77.269 139.154 25.791 1.00 48.76 N
ATOM 21 C2 G B 135 76.787 138.078 26.487 1.00 48.99 C
ATOM 22 N2 G B 135 75.782 137.411 25.906 1.00 49.45 N
ATOM 23 N3 G B 135 77.256 137.683 27.663 1.00 49.10 N
ATOM 24 C4 G B 135 78.277 138.457 28.083 1.00 48.92 C
ATOM 25 P A B 136 77.356 135.220 34.050 1.00 39.62 P
ATOM 26 OP1 A B 136 78.325 135.451 35.153 1.00 39.96 O
ATOM 27 OP2 A B 136 77.145 133.836 33.544 1.00 38.97 O
ATOM 28 O5' A B 136 75.953 135.848 34.455 1.00 37.13 O
TER

Atoms:
OP1: (86.908,148.948,25.018)
OP2: (87.349,146.542,24.288)
C3': (88.160,146.158,29.134)
C1': (86.026,146.207,30.128)
C5': (87.649,148.119,27.633)
O4': (86.214,147.440,29.449)
C8: (84.496,145.719,28.153)
O2': (87.923,145.944,31.568)
C6: (82.808,142.744,28.951)
C5: (83.574,143.908,28.765)
C4: (84.495,144.219,29.749)
P: (86.722,147.501,25.227)
C4': (87.595,147.561,29.031)
C2': (87.401,145.563,30.310)
C2: (83.982,142.428,30.918)
N1: (83.044,142.008,30.058)
N3: (84.756,143.509,30.860)
N6: (81.864,142.338,28.102)
N7: (83.594,144.860,27.756)
N9: (85.061,145.411,29.367)
O5': (87.206,147.119,26.695)
O3': (89.556,146.195,29.337)
OP1: (75.552,132.640,28.145)
OP2: (75.399,134.890,26.938)
C3': (77.319,135.897,31.530)
C1': (78.697,137.402,30.371)
C5': (77.820,134.096,29.774)
O6: (78.656,140.923,25.506)
O4': (79.140,136.117,30.001)
C8: (79.917,139.315,29.274)
C2: (76.787,138.078,26.487)
C6: (78.314,139.966,26.204)
C5: (78.844,139.542,27.451)
C4: (78.277,138.457,28.083)
P: (76.195,133.912,27.715)
C4': (78.364,135.123,30.729)
C2': (77.237,137.217,30.774)
O2': (76.798,138.284,31.587)
N1: (77.269,139.154,25.791)
N2: (75.782,137.411,25.906)
N3: (77.256,137.683,27.663)
N7: (79.883,140.063,28.207)
N9: (78.955,138.338,29.280)
O5': (76.729,134.649,29.020)
O3': (77.832,136.138,32.829)
Image (generated by PyMOL):
PyMOL image
show in jmol