Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0119:0135
Extra
PDB:
ATOM 1 O3' C A 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 2 P A A 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 3 OP1 A A 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 4 OP2 A A 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 5 O5' A A 119 87.078 147.287 26.686 1.00 45.01 O
ATOM 6 C5' A A 119 87.516 148.301 27.610 1.00 42.05 C
ATOM 7 C4' A A 119 87.462 147.762 29.015 1.00 40.99 C
ATOM 8 O4' A A 119 86.080 147.637 29.429 1.00 41.40 O
ATOM 9 C3' A A 119 88.027 146.359 29.129 1.00 40.73 C
ATOM 10 O3' A A 119 89.423 146.387 29.315 1.00 42.35 O
ATOM 11 C2' A A 119 87.273 145.777 30.312 1.00 41.00 C
ATOM 12 O2' A A 119 87.783 146.188 31.562 1.00 41.48 O
ATOM 13 C1' A A 119 85.897 146.409 30.117 1.00 41.42 C
ATOM 14 N9 A A 119 84.948 145.595 29.355 1.00 40.35 N
ATOM 15 C8 A A 119 84.377 145.893 28.141 1.00 39.86 C
ATOM 16 N7 A A 119 83.488 145.020 27.747 1.00 40.34 N
ATOM 17 C5 A A 119 83.484 144.069 28.756 1.00 41.12 C
ATOM 18 C6 A A 119 82.735 142.896 28.945 1.00 40.44 C
ATOM 19 N6 A A 119 81.797 142.478 28.097 1.00 38.20 N
ATOM 20 N1 A A 119 82.981 142.165 30.054 1.00 40.79 N
ATOM 21 C2 A A 119 83.915 142.597 30.911 1.00 40.32 C
ATOM 22 N3 A A 119 84.675 143.688 30.850 1.00 40.80 N
ATOM 23 C4 A A 119 84.403 144.394 29.738 1.00 40.90 C
ATOM 24 P A A 120 90.327 145.295 28.589 1.00 44.63 P
ATOM 25 OP1 A A 120 91.737 145.447 29.029 1.00 46.56 O
ATOM 26 OP2 A A 120 89.991 145.331 27.146 1.00 43.97 O
ATOM 27 O5' A A 120 89.790 143.931 29.191 1.00 45.48 O
TER
ATOM 1 O3' U B 134 77.429 133.607 26.941 1.00 30.21 O
ATOM 2 P G B 135 76.105 134.047 27.743 1.00 33.48 P
ATOM 3 OP1 G B 135 75.490 132.779 28.232 1.00 36.04 O
ATOM 4 OP2 G B 135 75.265 135.007 26.987 1.00 31.50 O
ATOM 5 O5' G B 135 76.695 134.823 28.999 1.00 34.74 O
ATOM 6 C5' G B 135 77.750 134.245 29.783 1.00 33.67 C
ATOM 7 C4' G B 135 78.283 135.258 30.758 1.00 35.19 C
ATOM 8 O4' G B 135 79.059 136.265 30.047 1.00 38.64 O
ATOM 9 C3' G B 135 77.217 136.018 31.544 1.00 35.36 C
ATOM 10 O3' G B 135 77.709 136.281 32.850 1.00 34.15 O
ATOM 11 C2' G B 135 77.113 137.324 30.768 1.00 35.83 C
ATOM 12 O2' G B 135 76.621 138.396 31.544 1.00 34.46 O
ATOM 13 C1' G B 135 78.575 137.541 30.392 1.00 37.99 C
ATOM 14 N9 G B 135 78.830 138.477 29.302 1.00 41.70 N
ATOM 15 C8 G B 135 79.778 139.469 29.305 1.00 41.65 C
ATOM 16 N7 G B 135 79.736 140.222 28.242 1.00 43.87 N
ATOM 17 C5 G B 135 78.709 139.688 27.479 1.00 43.91 C
ATOM 18 C6 G B 135 78.183 140.106 26.230 1.00 44.04 C
ATOM 19 O6 G B 135 78.512 141.074 25.543 1.00 45.35 O
ATOM 20 N1 G B 135 77.158 139.275 25.803 1.00 43.74 N
ATOM 21 C2 G B 135 76.685 138.191 26.491 1.00 43.19 C
ATOM 22 N2 G B 135 75.695 137.515 25.898 1.00 42.90 N
ATOM 23 N3 G B 135 77.150 137.799 27.671 1.00 43.32 N
ATOM 24 C4 G B 135 78.156 138.590 28.102 1.00 43.11 C
ATOM 25 P A B 136 77.230 135.369 34.072 1.00 33.28 P
ATOM 26 OP1 A B 136 78.205 135.552 35.175 1.00 33.54 O
ATOM 27 OP2 A B 136 76.981 134.001 33.541 1.00 33.07 O
ATOM 28 O5' A B 136 75.839 136.012 34.495 1.00 29.71 O
TER
ATOM 2 P A A 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 3 OP1 A A 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 4 OP2 A A 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 5 O5' A A 119 87.078 147.287 26.686 1.00 45.01 O
ATOM 6 C5' A A 119 87.516 148.301 27.610 1.00 42.05 C
ATOM 7 C4' A A 119 87.462 147.762 29.015 1.00 40.99 C
ATOM 8 O4' A A 119 86.080 147.637 29.429 1.00 41.40 O
ATOM 9 C3' A A 119 88.027 146.359 29.129 1.00 40.73 C
ATOM 10 O3' A A 119 89.423 146.387 29.315 1.00 42.35 O
ATOM 11 C2' A A 119 87.273 145.777 30.312 1.00 41.00 C
ATOM 12 O2' A A 119 87.783 146.188 31.562 1.00 41.48 O
ATOM 13 C1' A A 119 85.897 146.409 30.117 1.00 41.42 C
ATOM 14 N9 A A 119 84.948 145.595 29.355 1.00 40.35 N
ATOM 15 C8 A A 119 84.377 145.893 28.141 1.00 39.86 C
ATOM 16 N7 A A 119 83.488 145.020 27.747 1.00 40.34 N
ATOM 17 C5 A A 119 83.484 144.069 28.756 1.00 41.12 C
ATOM 18 C6 A A 119 82.735 142.896 28.945 1.00 40.44 C
ATOM 19 N6 A A 119 81.797 142.478 28.097 1.00 38.20 N
ATOM 20 N1 A A 119 82.981 142.165 30.054 1.00 40.79 N
ATOM 21 C2 A A 119 83.915 142.597 30.911 1.00 40.32 C
ATOM 22 N3 A A 119 84.675 143.688 30.850 1.00 40.80 N
ATOM 23 C4 A A 119 84.403 144.394 29.738 1.00 40.90 C
ATOM 24 P A A 120 90.327 145.295 28.589 1.00 44.63 P
ATOM 25 OP1 A A 120 91.737 145.447 29.029 1.00 46.56 O
ATOM 26 OP2 A A 120 89.991 145.331 27.146 1.00 43.97 O
ATOM 27 O5' A A 120 89.790 143.931 29.191 1.00 45.48 O
TER
ATOM 1 O3' U B 134 77.429 133.607 26.941 1.00 30.21 O
ATOM 2 P G B 135 76.105 134.047 27.743 1.00 33.48 P
ATOM 3 OP1 G B 135 75.490 132.779 28.232 1.00 36.04 O
ATOM 4 OP2 G B 135 75.265 135.007 26.987 1.00 31.50 O
ATOM 5 O5' G B 135 76.695 134.823 28.999 1.00 34.74 O
ATOM 6 C5' G B 135 77.750 134.245 29.783 1.00 33.67 C
ATOM 7 C4' G B 135 78.283 135.258 30.758 1.00 35.19 C
ATOM 8 O4' G B 135 79.059 136.265 30.047 1.00 38.64 O
ATOM 9 C3' G B 135 77.217 136.018 31.544 1.00 35.36 C
ATOM 10 O3' G B 135 77.709 136.281 32.850 1.00 34.15 O
ATOM 11 C2' G B 135 77.113 137.324 30.768 1.00 35.83 C
ATOM 12 O2' G B 135 76.621 138.396 31.544 1.00 34.46 O
ATOM 13 C1' G B 135 78.575 137.541 30.392 1.00 37.99 C
ATOM 14 N9 G B 135 78.830 138.477 29.302 1.00 41.70 N
ATOM 15 C8 G B 135 79.778 139.469 29.305 1.00 41.65 C
ATOM 16 N7 G B 135 79.736 140.222 28.242 1.00 43.87 N
ATOM 17 C5 G B 135 78.709 139.688 27.479 1.00 43.91 C
ATOM 18 C6 G B 135 78.183 140.106 26.230 1.00 44.04 C
ATOM 19 O6 G B 135 78.512 141.074 25.543 1.00 45.35 O
ATOM 20 N1 G B 135 77.158 139.275 25.803 1.00 43.74 N
ATOM 21 C2 G B 135 76.685 138.191 26.491 1.00 43.19 C
ATOM 22 N2 G B 135 75.695 137.515 25.898 1.00 42.90 N
ATOM 23 N3 G B 135 77.150 137.799 27.671 1.00 43.32 N
ATOM 24 C4 G B 135 78.156 138.590 28.102 1.00 43.11 C
ATOM 25 P A B 136 77.230 135.369 34.072 1.00 33.28 P
ATOM 26 OP1 A B 136 78.205 135.552 35.175 1.00 33.54 O
ATOM 27 OP2 A B 136 76.981 134.001 33.541 1.00 33.07 O
ATOM 28 O5' A B 136 75.839 136.012 34.495 1.00 29.71 O
TER
Atoms:
OP1: (86.686,149.106,25.029)
OP2: (87.211,146.727,24.269)
C3': (88.027,146.359,29.129)
C1': (85.897,146.409,30.117)
C5': (87.516,148.301,27.610)
O4': (86.080,147.637,29.429)
C8: (84.377,145.893,28.141)
O2': (87.783,146.188,31.562)
C6: (82.735,142.896,28.945)
C5: (83.484,144.069,28.756)
C4: (84.403,144.394,29.738)
P: (86.560,147.653,25.226)
C4': (87.462,147.762,29.015)
C2': (87.273,145.777,30.312)
C2: (83.915,142.597,30.911)
N1: (82.981,142.165,30.054)
N3: (84.675,143.688,30.850)
N6: (81.797,142.478,28.097)
N7: (83.488,145.020,27.747)
N9: (84.948,145.595,29.355)
O5': (87.078,147.287,26.686)
O3': (89.423,146.387,29.315)
OP2: (87.211,146.727,24.269)
C3': (88.027,146.359,29.129)
C1': (85.897,146.409,30.117)
C5': (87.516,148.301,27.610)
O4': (86.080,147.637,29.429)
C8: (84.377,145.893,28.141)
O2': (87.783,146.188,31.562)
C6: (82.735,142.896,28.945)
C5: (83.484,144.069,28.756)
C4: (84.403,144.394,29.738)
P: (86.560,147.653,25.226)
C4': (87.462,147.762,29.015)
C2': (87.273,145.777,30.312)
C2: (83.915,142.597,30.911)
N1: (82.981,142.165,30.054)
N3: (84.675,143.688,30.850)
N6: (81.797,142.478,28.097)
N7: (83.488,145.020,27.747)
N9: (84.948,145.595,29.355)
O5': (87.078,147.287,26.686)
O3': (89.423,146.387,29.315)
OP1: (75.490,132.779,28.232)
OP2: (75.265,135.007,26.987)
C3': (77.217,136.018,31.544)
C1': (78.575,137.541,30.392)
C5': (77.750,134.245,29.783)
O6: (78.512,141.074,25.543)
O4': (79.059,136.265,30.047)
C8: (79.778,139.469,29.305)
C2: (76.685,138.191,26.491)
C6: (78.183,140.106,26.230)
C5: (78.709,139.688,27.479)
C4: (78.156,138.590,28.102)
P: (76.105,134.047,27.743)
C4': (78.283,135.258,30.758)
C2': (77.113,137.324,30.768)
O2': (76.621,138.396,31.544)
N1: (77.158,139.275,25.803)
N2: (75.695,137.515,25.898)
N3: (77.150,137.799,27.671)
N7: (79.736,140.222,28.242)
N9: (78.830,138.477,29.302)
O5': (76.695,134.823,28.999)
O3': (77.709,136.281,32.850)
OP2: (75.265,135.007,26.987)
C3': (77.217,136.018,31.544)
C1': (78.575,137.541,30.392)
C5': (77.750,134.245,29.783)
O6: (78.512,141.074,25.543)
O4': (79.059,136.265,30.047)
C8: (79.778,139.469,29.305)
C2: (76.685,138.191,26.491)
C6: (78.183,140.106,26.230)
C5: (78.709,139.688,27.479)
C4: (78.156,138.590,28.102)
P: (76.105,134.047,27.743)
C4': (78.283,135.258,30.758)
C2': (77.113,137.324,30.768)
O2': (76.621,138.396,31.544)
N1: (77.158,139.275,25.803)
N2: (75.695,137.515,25.898)
N3: (77.150,137.799,27.671)
N7: (79.736,140.222,28.242)
N9: (78.830,138.477,29.302)
O5': (76.695,134.823,28.999)
O3': (77.709,136.281,32.850)
Image (generated by PyMOL):