Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0119:0135
Extra
PDB:
ATOM 1 O3' C A 118 85.088 147.196 25.226 1.00 50.60 O
ATOM 2 P A A 119 86.670 147.429 25.162 1.00 48.30 P
ATOM 3 OP1 A A 119 86.875 148.862 24.888 1.00 48.57 O
ATOM 4 OP2 A A 119 87.274 146.425 24.262 1.00 49.16 O
ATOM 5 O5' A A 119 87.160 147.094 26.637 1.00 46.03 O
ATOM 6 C5' A A 119 87.530 148.129 27.569 1.00 43.79 C
ATOM 7 C4' A A 119 87.529 147.568 28.966 1.00 42.51 C
ATOM 8 O4' A A 119 86.166 147.425 29.425 1.00 42.61 O
ATOM 9 C3' A A 119 88.119 146.170 29.026 1.00 41.60 C
ATOM 10 O3' A A 119 89.517 146.225 29.209 1.00 43.06 O
ATOM 11 C2' A A 119 87.391 145.536 30.197 1.00 41.05 C
ATOM 12 O2' A A 119 87.939 145.918 31.439 1.00 41.47 O
ATOM 13 C1' A A 119 86.005 146.167 30.057 1.00 41.79 C
ATOM 14 N9 A A 119 85.032 145.393 29.283 1.00 40.67 N
ATOM 15 C8 A A 119 84.454 145.740 28.086 1.00 39.84 C
ATOM 16 N7 A A 119 83.543 144.896 27.674 1.00 39.99 N
ATOM 17 C5 A A 119 83.533 143.913 28.652 1.00 41.18 C
ATOM 18 C6 A A 119 82.768 142.748 28.807 1.00 40.26 C
ATOM 19 N6 A A 119 81.822 142.371 27.950 1.00 39.29 N
ATOM 20 N1 A A 119 83.008 141.978 29.889 1.00 40.09 N
ATOM 21 C2 A A 119 83.957 142.365 30.751 1.00 40.38 C
ATOM 22 N3 A A 119 84.737 143.442 30.720 1.00 40.34 N
ATOM 23 C4 A A 119 84.468 144.189 29.634 1.00 41.55 C
ATOM 24 P A A 120 90.438 145.105 28.548 1.00 44.07 P
ATOM 25 OP1 A A 120 91.826 145.245 29.058 1.00 45.61 O
ATOM 26 OP2 A A 120 90.175 145.128 27.088 1.00 44.60 O
ATOM 27 O5' A A 120 89.852 143.759 29.144 1.00 46.00 O
TER
ATOM 1 O3' U B 134 77.491 133.430 26.962 1.00 34.89 O
ATOM 2 P G B 135 76.112 133.876 27.664 1.00 38.10 P
ATOM 3 OP1 G B 135 75.394 132.631 28.053 1.00 41.03 O
ATOM 4 OP2 G B 135 75.395 134.895 26.864 1.00 36.96 O
ATOM 5 O5' G B 135 76.615 134.591 28.990 1.00 38.52 O
ATOM 6 C5' G B 135 77.684 134.020 29.753 1.00 37.36 C
ATOM 7 C4' G B 135 78.267 135.045 30.684 1.00 36.91 C
ATOM 8 O4' G B 135 79.019 136.028 29.921 1.00 37.91 O
ATOM 9 C3' G B 135 77.252 135.829 31.511 1.00 36.66 C
ATOM 10 O3' G B 135 77.800 136.062 32.796 1.00 35.87 O
ATOM 11 C2' G B 135 77.165 137.151 30.761 1.00 36.99 C
ATOM 12 O2' G B 135 76.761 138.215 31.596 1.00 36.41 O
ATOM 13 C1' G B 135 78.613 137.317 30.316 1.00 38.01 C
ATOM 14 N9 G B 135 78.860 138.258 29.227 1.00 41.45 N
ATOM 15 C8 G B 135 79.815 139.246 29.223 1.00 42.24 C
ATOM 16 N7 G B 135 79.786 139.983 28.149 1.00 43.58 N
ATOM 17 C5 G B 135 78.756 139.449 27.390 1.00 43.26 C
ATOM 18 C6 G B 135 78.239 139.856 26.138 1.00 43.13 C
ATOM 19 O6 G B 135 78.580 140.811 25.439 1.00 44.51 O
ATOM 20 N1 G B 135 77.205 139.032 25.722 1.00 44.02 N
ATOM 21 C2 G B 135 76.715 137.966 26.427 1.00 43.42 C
ATOM 22 N2 G B 135 75.713 137.298 25.850 1.00 44.03 N
ATOM 23 N3 G B 135 77.172 137.586 27.608 1.00 43.22 N
ATOM 24 C4 G B 135 78.187 138.367 28.028 1.00 42.72 C
ATOM 25 P A B 136 77.297 135.191 34.037 1.00 34.55 P
ATOM 26 OP1 A B 136 78.244 135.423 35.153 1.00 33.92 O
ATOM 27 OP2 A B 136 77.059 133.808 33.559 1.00 34.56 O
ATOM 28 O5' A B 136 75.902 135.848 34.411 1.00 31.93 O
TER
ATOM 2 P A A 119 86.670 147.429 25.162 1.00 48.30 P
ATOM 3 OP1 A A 119 86.875 148.862 24.888 1.00 48.57 O
ATOM 4 OP2 A A 119 87.274 146.425 24.262 1.00 49.16 O
ATOM 5 O5' A A 119 87.160 147.094 26.637 1.00 46.03 O
ATOM 6 C5' A A 119 87.530 148.129 27.569 1.00 43.79 C
ATOM 7 C4' A A 119 87.529 147.568 28.966 1.00 42.51 C
ATOM 8 O4' A A 119 86.166 147.425 29.425 1.00 42.61 O
ATOM 9 C3' A A 119 88.119 146.170 29.026 1.00 41.60 C
ATOM 10 O3' A A 119 89.517 146.225 29.209 1.00 43.06 O
ATOM 11 C2' A A 119 87.391 145.536 30.197 1.00 41.05 C
ATOM 12 O2' A A 119 87.939 145.918 31.439 1.00 41.47 O
ATOM 13 C1' A A 119 86.005 146.167 30.057 1.00 41.79 C
ATOM 14 N9 A A 119 85.032 145.393 29.283 1.00 40.67 N
ATOM 15 C8 A A 119 84.454 145.740 28.086 1.00 39.84 C
ATOM 16 N7 A A 119 83.543 144.896 27.674 1.00 39.99 N
ATOM 17 C5 A A 119 83.533 143.913 28.652 1.00 41.18 C
ATOM 18 C6 A A 119 82.768 142.748 28.807 1.00 40.26 C
ATOM 19 N6 A A 119 81.822 142.371 27.950 1.00 39.29 N
ATOM 20 N1 A A 119 83.008 141.978 29.889 1.00 40.09 N
ATOM 21 C2 A A 119 83.957 142.365 30.751 1.00 40.38 C
ATOM 22 N3 A A 119 84.737 143.442 30.720 1.00 40.34 N
ATOM 23 C4 A A 119 84.468 144.189 29.634 1.00 41.55 C
ATOM 24 P A A 120 90.438 145.105 28.548 1.00 44.07 P
ATOM 25 OP1 A A 120 91.826 145.245 29.058 1.00 45.61 O
ATOM 26 OP2 A A 120 90.175 145.128 27.088 1.00 44.60 O
ATOM 27 O5' A A 120 89.852 143.759 29.144 1.00 46.00 O
TER
ATOM 1 O3' U B 134 77.491 133.430 26.962 1.00 34.89 O
ATOM 2 P G B 135 76.112 133.876 27.664 1.00 38.10 P
ATOM 3 OP1 G B 135 75.394 132.631 28.053 1.00 41.03 O
ATOM 4 OP2 G B 135 75.395 134.895 26.864 1.00 36.96 O
ATOM 5 O5' G B 135 76.615 134.591 28.990 1.00 38.52 O
ATOM 6 C5' G B 135 77.684 134.020 29.753 1.00 37.36 C
ATOM 7 C4' G B 135 78.267 135.045 30.684 1.00 36.91 C
ATOM 8 O4' G B 135 79.019 136.028 29.921 1.00 37.91 O
ATOM 9 C3' G B 135 77.252 135.829 31.511 1.00 36.66 C
ATOM 10 O3' G B 135 77.800 136.062 32.796 1.00 35.87 O
ATOM 11 C2' G B 135 77.165 137.151 30.761 1.00 36.99 C
ATOM 12 O2' G B 135 76.761 138.215 31.596 1.00 36.41 O
ATOM 13 C1' G B 135 78.613 137.317 30.316 1.00 38.01 C
ATOM 14 N9 G B 135 78.860 138.258 29.227 1.00 41.45 N
ATOM 15 C8 G B 135 79.815 139.246 29.223 1.00 42.24 C
ATOM 16 N7 G B 135 79.786 139.983 28.149 1.00 43.58 N
ATOM 17 C5 G B 135 78.756 139.449 27.390 1.00 43.26 C
ATOM 18 C6 G B 135 78.239 139.856 26.138 1.00 43.13 C
ATOM 19 O6 G B 135 78.580 140.811 25.439 1.00 44.51 O
ATOM 20 N1 G B 135 77.205 139.032 25.722 1.00 44.02 N
ATOM 21 C2 G B 135 76.715 137.966 26.427 1.00 43.42 C
ATOM 22 N2 G B 135 75.713 137.298 25.850 1.00 44.03 N
ATOM 23 N3 G B 135 77.172 137.586 27.608 1.00 43.22 N
ATOM 24 C4 G B 135 78.187 138.367 28.028 1.00 42.72 C
ATOM 25 P A B 136 77.297 135.191 34.037 1.00 34.55 P
ATOM 26 OP1 A B 136 78.244 135.423 35.153 1.00 33.92 O
ATOM 27 OP2 A B 136 77.059 133.808 33.559 1.00 34.56 O
ATOM 28 O5' A B 136 75.902 135.848 34.411 1.00 31.93 O
TER
Atoms:
OP1: (86.875,148.862,24.888)
OP2: (87.274,146.425,24.262)
C3': (88.119,146.170,29.026)
C1': (86.005,146.167,30.057)
C5': (87.530,148.129,27.569)
O4': (86.166,147.425,29.425)
C8: (84.454,145.740,28.086)
O2': (87.939,145.918,31.439)
C6: (82.768,142.748,28.807)
C5: (83.533,143.913,28.652)
C4: (84.468,144.189,29.634)
P: (86.670,147.429,25.162)
C4': (87.529,147.568,28.966)
C2': (87.391,145.536,30.197)
C2: (83.957,142.365,30.751)
N1: (83.008,141.978,29.889)
N3: (84.737,143.442,30.720)
N6: (81.822,142.371,27.950)
N7: (83.543,144.896,27.674)
N9: (85.032,145.393,29.283)
O5': (87.160,147.094,26.637)
O3': (89.517,146.225,29.209)
OP2: (87.274,146.425,24.262)
C3': (88.119,146.170,29.026)
C1': (86.005,146.167,30.057)
C5': (87.530,148.129,27.569)
O4': (86.166,147.425,29.425)
C8: (84.454,145.740,28.086)
O2': (87.939,145.918,31.439)
C6: (82.768,142.748,28.807)
C5: (83.533,143.913,28.652)
C4: (84.468,144.189,29.634)
P: (86.670,147.429,25.162)
C4': (87.529,147.568,28.966)
C2': (87.391,145.536,30.197)
C2: (83.957,142.365,30.751)
N1: (83.008,141.978,29.889)
N3: (84.737,143.442,30.720)
N6: (81.822,142.371,27.950)
N7: (83.543,144.896,27.674)
N9: (85.032,145.393,29.283)
O5': (87.160,147.094,26.637)
O3': (89.517,146.225,29.209)
OP1: (75.394,132.631,28.053)
OP2: (75.395,134.895,26.864)
C3': (77.252,135.829,31.511)
C1': (78.613,137.317,30.316)
C5': (77.684,134.020,29.753)
O6: (78.580,140.811,25.439)
O4': (79.019,136.028,29.921)
C8: (79.815,139.246,29.223)
C2: (76.715,137.966,26.427)
C6: (78.239,139.856,26.138)
C5: (78.756,139.449,27.390)
C4: (78.187,138.367,28.028)
P: (76.112,133.876,27.664)
C4': (78.267,135.045,30.684)
C2': (77.165,137.151,30.761)
O2': (76.761,138.215,31.596)
N1: (77.205,139.032,25.722)
N2: (75.713,137.298,25.850)
N3: (77.172,137.586,27.608)
N7: (79.786,139.983,28.149)
N9: (78.860,138.258,29.227)
O5': (76.615,134.591,28.990)
O3': (77.800,136.062,32.796)
OP2: (75.395,134.895,26.864)
C3': (77.252,135.829,31.511)
C1': (78.613,137.317,30.316)
C5': (77.684,134.020,29.753)
O6: (78.580,140.811,25.439)
O4': (79.019,136.028,29.921)
C8: (79.815,139.246,29.223)
C2: (76.715,137.966,26.427)
C6: (78.239,139.856,26.138)
C5: (78.756,139.449,27.390)
C4: (78.187,138.367,28.028)
P: (76.112,133.876,27.664)
C4': (78.267,135.045,30.684)
C2': (77.165,137.151,30.761)
O2': (76.761,138.215,31.596)
N1: (77.205,139.032,25.722)
N2: (75.713,137.298,25.850)
N3: (77.172,137.586,27.608)
N7: (79.786,139.983,28.149)
N9: (78.860,138.258,29.227)
O5': (76.615,134.591,28.990)
O3': (77.800,136.062,32.796)
Image (generated by PyMOL):