Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02249:02220
Extra
PDB:
ATOM 1 O3' G A2248 70.583 44.963 58.206 1.00 66.73 O
ATOM 2 P A A2249 71.000 43.546 58.841 1.00 67.77 P
ATOM 3 OP1 A A2249 71.220 42.587 57.727 1.00 68.41 O
ATOM 4 OP2 A A2249 70.016 43.220 59.911 1.00 67.94 O
ATOM 5 O5' A A2249 72.410 43.844 59.520 1.00 66.57 O
ATOM 6 C5' A A2249 73.447 44.515 58.780 1.00 65.88 C
ATOM 7 C4' A A2249 74.511 45.029 59.714 1.00 65.17 C
ATOM 8 O4' A A2249 73.971 46.056 60.583 1.00 65.59 O
ATOM 9 C3' A A2249 75.060 44.005 60.680 1.00 64.96 C
ATOM 10 O3' A A2249 76.022 43.186 60.045 1.00 68.19 O
ATOM 11 C2' A A2249 75.658 44.880 61.769 1.00 64.30 C
ATOM 12 O2' A A2249 76.903 45.427 61.397 1.00 61.59 O
ATOM 13 C1' A A2249 74.624 46.003 61.843 1.00 65.21 C
ATOM 14 N9 A A2249 73.613 45.797 62.881 1.00 66.39 N
ATOM 15 C8 A A2249 72.420 45.122 62.772 1.00 66.94 C
ATOM 16 N7 A A2249 71.709 45.123 63.874 1.00 67.22 N
ATOM 17 C5 A A2249 72.485 45.845 64.773 1.00 65.97 C
ATOM 18 C6 A A2249 72.282 46.214 66.115 1.00 65.00 C
ATOM 19 N6 A A2249 71.184 45.905 66.809 1.00 65.24 N
ATOM 20 N1 A A2249 73.254 46.926 66.723 1.00 64.14 N
ATOM 21 C2 A A2249 74.343 47.253 66.022 1.00 63.41 C
ATOM 22 N3 A A2249 74.645 46.976 64.757 1.00 64.43 N
ATOM 23 C4 A A2249 73.665 46.260 64.179 1.00 65.94 C
ATOM 24 P C A2250 76.525 41.850 60.775 1.00 70.08 P
ATOM 25 OP1 C A2250 77.403 41.106 59.819 1.00 69.69 O
ATOM 26 OP2 C A2250 75.333 41.173 61.363 1.00 69.69 O
ATOM 27 O5' C A2250 77.409 42.411 61.973 1.00 65.88 O
TER
ATOM 1 O3' U B2219 81.205 48.910 70.000 1.00 66.83 O
ATOM 2 P G B2220 80.010 49.180 68.957 1.00 70.94 P
ATOM 3 OP1 G B2220 79.736 47.938 68.179 1.00 70.82 O
ATOM 4 OP2 G B2220 80.360 50.433 68.231 1.00 70.84 O
ATOM 5 O5' G B2220 78.752 49.473 69.900 1.00 69.85 O
ATOM 6 C5' G B2220 78.580 50.771 70.509 1.00 68.75 C
ATOM 7 C4' G B2220 77.621 50.714 71.682 1.00 66.71 C
ATOM 8 O4' G B2220 76.250 50.545 71.223 1.00 66.46 O
ATOM 9 C3' G B2220 77.857 49.654 72.751 1.00 65.50 C
ATOM 10 O3' G B2220 77.598 50.228 74.028 1.00 65.12 O
ATOM 11 C2' G B2220 76.782 48.614 72.432 1.00 65.49 C
ATOM 12 O2' G B2220 76.368 47.894 73.576 1.00 66.05 O
ATOM 13 C1' G B2220 75.636 49.499 71.950 1.00 64.61 C
ATOM 14 N9 G B2220 74.656 48.846 71.083 1.00 62.81 N
ATOM 15 C8 G B2220 74.889 48.238 69.871 1.00 62.37 C
ATOM 16 N7 G B2220 73.801 47.789 69.305 1.00 61.05 N
ATOM 17 C5 G B2220 72.789 48.107 70.200 1.00 61.14 C
ATOM 18 C6 G B2220 71.386 47.875 70.127 1.00 60.67 C
ATOM 19 O6 G B2220 70.739 47.326 69.228 1.00 60.54 O
ATOM 20 N1 G B2220 70.729 48.357 71.252 1.00 59.85 N
ATOM 21 C2 G B2220 71.335 48.981 72.312 1.00 61.22 C
ATOM 22 N2 G B2220 70.525 49.376 73.304 1.00 61.88 N
ATOM 23 N3 G B2220 72.640 49.203 72.396 1.00 61.76 N
ATOM 24 C4 G B2220 73.300 48.747 71.310 1.00 61.87 C
ATOM 25 P A B2221 78.786 50.955 74.830 1.00 64.96 P
ATOM 26 OP1 A B2221 80.080 50.311 74.479 1.00 63.90 O
ATOM 27 OP2 A B2221 78.382 51.069 76.257 1.00 64.95 O
ATOM 28 O5' A B2221 78.802 52.423 74.226 1.00 64.61 O
TER
ATOM 2 P A A2249 71.000 43.546 58.841 1.00 67.77 P
ATOM 3 OP1 A A2249 71.220 42.587 57.727 1.00 68.41 O
ATOM 4 OP2 A A2249 70.016 43.220 59.911 1.00 67.94 O
ATOM 5 O5' A A2249 72.410 43.844 59.520 1.00 66.57 O
ATOM 6 C5' A A2249 73.447 44.515 58.780 1.00 65.88 C
ATOM 7 C4' A A2249 74.511 45.029 59.714 1.00 65.17 C
ATOM 8 O4' A A2249 73.971 46.056 60.583 1.00 65.59 O
ATOM 9 C3' A A2249 75.060 44.005 60.680 1.00 64.96 C
ATOM 10 O3' A A2249 76.022 43.186 60.045 1.00 68.19 O
ATOM 11 C2' A A2249 75.658 44.880 61.769 1.00 64.30 C
ATOM 12 O2' A A2249 76.903 45.427 61.397 1.00 61.59 O
ATOM 13 C1' A A2249 74.624 46.003 61.843 1.00 65.21 C
ATOM 14 N9 A A2249 73.613 45.797 62.881 1.00 66.39 N
ATOM 15 C8 A A2249 72.420 45.122 62.772 1.00 66.94 C
ATOM 16 N7 A A2249 71.709 45.123 63.874 1.00 67.22 N
ATOM 17 C5 A A2249 72.485 45.845 64.773 1.00 65.97 C
ATOM 18 C6 A A2249 72.282 46.214 66.115 1.00 65.00 C
ATOM 19 N6 A A2249 71.184 45.905 66.809 1.00 65.24 N
ATOM 20 N1 A A2249 73.254 46.926 66.723 1.00 64.14 N
ATOM 21 C2 A A2249 74.343 47.253 66.022 1.00 63.41 C
ATOM 22 N3 A A2249 74.645 46.976 64.757 1.00 64.43 N
ATOM 23 C4 A A2249 73.665 46.260 64.179 1.00 65.94 C
ATOM 24 P C A2250 76.525 41.850 60.775 1.00 70.08 P
ATOM 25 OP1 C A2250 77.403 41.106 59.819 1.00 69.69 O
ATOM 26 OP2 C A2250 75.333 41.173 61.363 1.00 69.69 O
ATOM 27 O5' C A2250 77.409 42.411 61.973 1.00 65.88 O
TER
ATOM 1 O3' U B2219 81.205 48.910 70.000 1.00 66.83 O
ATOM 2 P G B2220 80.010 49.180 68.957 1.00 70.94 P
ATOM 3 OP1 G B2220 79.736 47.938 68.179 1.00 70.82 O
ATOM 4 OP2 G B2220 80.360 50.433 68.231 1.00 70.84 O
ATOM 5 O5' G B2220 78.752 49.473 69.900 1.00 69.85 O
ATOM 6 C5' G B2220 78.580 50.771 70.509 1.00 68.75 C
ATOM 7 C4' G B2220 77.621 50.714 71.682 1.00 66.71 C
ATOM 8 O4' G B2220 76.250 50.545 71.223 1.00 66.46 O
ATOM 9 C3' G B2220 77.857 49.654 72.751 1.00 65.50 C
ATOM 10 O3' G B2220 77.598 50.228 74.028 1.00 65.12 O
ATOM 11 C2' G B2220 76.782 48.614 72.432 1.00 65.49 C
ATOM 12 O2' G B2220 76.368 47.894 73.576 1.00 66.05 O
ATOM 13 C1' G B2220 75.636 49.499 71.950 1.00 64.61 C
ATOM 14 N9 G B2220 74.656 48.846 71.083 1.00 62.81 N
ATOM 15 C8 G B2220 74.889 48.238 69.871 1.00 62.37 C
ATOM 16 N7 G B2220 73.801 47.789 69.305 1.00 61.05 N
ATOM 17 C5 G B2220 72.789 48.107 70.200 1.00 61.14 C
ATOM 18 C6 G B2220 71.386 47.875 70.127 1.00 60.67 C
ATOM 19 O6 G B2220 70.739 47.326 69.228 1.00 60.54 O
ATOM 20 N1 G B2220 70.729 48.357 71.252 1.00 59.85 N
ATOM 21 C2 G B2220 71.335 48.981 72.312 1.00 61.22 C
ATOM 22 N2 G B2220 70.525 49.376 73.304 1.00 61.88 N
ATOM 23 N3 G B2220 72.640 49.203 72.396 1.00 61.76 N
ATOM 24 C4 G B2220 73.300 48.747 71.310 1.00 61.87 C
ATOM 25 P A B2221 78.786 50.955 74.830 1.00 64.96 P
ATOM 26 OP1 A B2221 80.080 50.311 74.479 1.00 63.90 O
ATOM 27 OP2 A B2221 78.382 51.069 76.257 1.00 64.95 O
ATOM 28 O5' A B2221 78.802 52.423 74.226 1.00 64.61 O
TER
Atoms:
OP1: (71.220,42.587,57.727)
OP2: (70.016,43.220,59.911)
C3': (75.060,44.005,60.680)
C1': (74.624,46.003,61.843)
C5': (73.447,44.515,58.780)
O4': (73.971,46.056,60.583)
C8: (72.420,45.122,62.772)
O2': (76.903,45.427,61.397)
C6: (72.282,46.214,66.115)
C5: (72.485,45.845,64.773)
C4: (73.665,46.260,64.179)
P: (71.000,43.546,58.841)
C4': (74.511,45.029,59.714)
C2': (75.658,44.880,61.769)
C2: (74.343,47.253,66.022)
N1: (73.254,46.926,66.723)
N3: (74.645,46.976,64.757)
N6: (71.184,45.905,66.809)
N7: (71.709,45.123,63.874)
N9: (73.613,45.797,62.881)
O5': (72.410,43.844,59.520)
O3': (76.022,43.186,60.045)
OP2: (70.016,43.220,59.911)
C3': (75.060,44.005,60.680)
C1': (74.624,46.003,61.843)
C5': (73.447,44.515,58.780)
O4': (73.971,46.056,60.583)
C8: (72.420,45.122,62.772)
O2': (76.903,45.427,61.397)
C6: (72.282,46.214,66.115)
C5: (72.485,45.845,64.773)
C4: (73.665,46.260,64.179)
P: (71.000,43.546,58.841)
C4': (74.511,45.029,59.714)
C2': (75.658,44.880,61.769)
C2: (74.343,47.253,66.022)
N1: (73.254,46.926,66.723)
N3: (74.645,46.976,64.757)
N6: (71.184,45.905,66.809)
N7: (71.709,45.123,63.874)
N9: (73.613,45.797,62.881)
O5': (72.410,43.844,59.520)
O3': (76.022,43.186,60.045)
OP1: (79.736,47.938,68.179)
OP2: (80.360,50.433,68.231)
C3': (77.857,49.654,72.751)
C1': (75.636,49.499,71.950)
C5': (78.580,50.771,70.509)
O6: (70.739,47.326,69.228)
O4': (76.250,50.545,71.223)
C8: (74.889,48.238,69.871)
C2: (71.335,48.981,72.312)
C6: (71.386,47.875,70.127)
C5: (72.789,48.107,70.200)
C4: (73.300,48.747,71.310)
P: (80.010,49.180,68.957)
C4': (77.621,50.714,71.682)
C2': (76.782,48.614,72.432)
O2': (76.368,47.894,73.576)
N1: (70.729,48.357,71.252)
N2: (70.525,49.376,73.304)
N3: (72.640,49.203,72.396)
N7: (73.801,47.789,69.305)
N9: (74.656,48.846,71.083)
O5': (78.752,49.473,69.900)
O3': (77.598,50.228,74.028)
OP2: (80.360,50.433,68.231)
C3': (77.857,49.654,72.751)
C1': (75.636,49.499,71.950)
C5': (78.580,50.771,70.509)
O6: (70.739,47.326,69.228)
O4': (76.250,50.545,71.223)
C8: (74.889,48.238,69.871)
C2: (71.335,48.981,72.312)
C6: (71.386,47.875,70.127)
C5: (72.789,48.107,70.200)
C4: (73.300,48.747,71.310)
P: (80.010,49.180,68.957)
C4': (77.621,50.714,71.682)
C2': (76.782,48.614,72.432)
O2': (76.368,47.894,73.576)
N1: (70.729,48.357,71.252)
N2: (70.525,49.376,73.304)
N3: (72.640,49.203,72.396)
N7: (73.801,47.789,69.305)
N9: (74.656,48.846,71.083)
O5': (78.752,49.473,69.900)
O3': (77.598,50.228,74.028)
Image (generated by PyMOL):