Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A70:A31
Extra
PDB:
ATOM 1 O3' G A 69 1.616 -58.943 9.036 1.00 89.81 O
ATOM 2 P A A 70 3.010 -58.324 9.534 1.00 88.24 P
ATOM 3 OP1 A A 70 4.053 -59.334 9.264 1.00 90.00 O
ATOM 4 OP2 A A 70 2.844 -57.810 10.915 1.00 87.07 O
ATOM 5 O5' A A 70 3.260 -57.087 8.548 1.00 86.28 O
ATOM 6 C5' A A 70 3.391 -57.264 7.143 1.00 86.16 C
ATOM 7 C4' A A 70 3.092 -55.971 6.408 1.00 84.45 C
ATOM 8 O4' A A 70 1.738 -55.528 6.698 1.00 83.62 O
ATOM 9 C3' A A 70 3.961 -54.794 6.813 1.00 82.49 C
ATOM 10 O3' A A 70 5.171 -54.786 6.092 1.00 83.54 O
ATOM 11 C2' A A 70 3.079 -53.617 6.430 1.00 81.13 C
ATOM 12 O2' A A 70 3.071 -53.368 5.039 1.00 81.51 O
ATOM 13 C1' A A 70 1.719 -54.122 6.903 1.00 81.42 C
ATOM 14 N9 A A 70 1.454 -53.805 8.315 1.00 79.43 N
ATOM 15 C8 A A 70 1.372 -54.690 9.356 1.00 79.45 C
ATOM 16 N7 A A 70 1.137 -54.135 10.519 1.00 78.11 N
ATOM 17 C5 A A 70 1.056 -52.785 10.230 1.00 76.59 C
ATOM 18 C6 A A 70 0.820 -51.654 11.043 1.00 74.87 C
ATOM 19 N6 A A 70 0.620 -51.735 12.363 1.00 74.02 N
ATOM 20 N1 A A 70 0.802 -50.437 10.450 1.00 74.00 N
ATOM 21 C2 A A 70 1.006 -50.369 9.126 1.00 74.76 C
ATOM 22 N3 A A 70 1.237 -51.360 8.260 1.00 76.09 N
ATOM 23 C4 A A 70 1.250 -52.558 8.876 1.00 77.25 C
ATOM 24 P G A 71 6.528 -54.438 6.864 1.00 83.13 P
ATOM 25 OP1 G A 71 7.636 -54.473 5.881 1.00 83.60 O
ATOM 26 OP2 G A 71 6.570 -55.280 8.083 1.00 83.17 O
ATOM 27 O5' G A 71 6.322 -52.922 7.324 1.00 81.35 O
TER
ATOM 1 O3' C B 30 0.897 -45.246 20.674 1.00 71.22 O
ATOM 2 P G B 31 -0.688 -45.271 20.473 1.00 71.26 P
ATOM 3 OP1 G B 31 -1.236 -44.045 21.095 1.00 70.54 O
ATOM 4 OP2 G B 31 -1.194 -46.604 20.882 1.00 72.09 O
ATOM 5 O5' G B 31 -0.860 -45.179 18.888 1.00 70.79 O
ATOM 6 C5' G B 31 -0.430 -44.039 18.160 1.00 69.96 C
ATOM 7 C4' G B 31 -0.537 -44.320 16.673 1.00 70.00 C
ATOM 8 O4' G B 31 0.175 -45.543 16.334 1.00 70.58 O
ATOM 9 C3' G B 31 -1.970 -44.501 16.184 1.00 70.08 C
ATOM 10 O3' G B 31 -2.177 -43.723 15.021 1.00 70.31 O
ATOM 11 C2' G B 31 -2.049 -45.989 15.871 1.00 71.13 C
ATOM 12 O2' G B 31 -2.986 -46.298 14.857 1.00 71.51 O
ATOM 13 C1' G B 31 -0.618 -46.256 15.408 1.00 71.36 C
ATOM 14 N9 G B 31 -0.291 -47.682 15.375 1.00 72.37 N
ATOM 15 C8 G B 31 -0.047 -48.417 14.242 1.00 73.14 C
ATOM 16 N7 G B 31 0.205 -49.674 14.473 1.00 74.21 N
ATOM 17 C5 G B 31 0.116 -49.787 15.852 1.00 74.24 C
ATOM 18 C6 G B 31 0.287 -50.921 16.683 1.00 75.36 C
ATOM 19 O6 G B 31 0.563 -52.079 16.340 1.00 76.84 O
ATOM 20 N1 G B 31 0.115 -50.621 18.035 1.00 75.02 N
ATOM 21 C2 G B 31 -0.190 -49.372 18.521 1.00 73.96 C
ATOM 22 N2 G B 31 -0.321 -49.264 19.852 1.00 74.20 N
ATOM 23 N3 G B 31 -0.359 -48.301 17.750 1.00 73.09 N
ATOM 24 C4 G B 31 -0.192 -48.573 16.428 1.00 73.12 C
ATOM 25 P A B 32 -3.160 -42.468 15.080 1.00 69.96 P
ATOM 26 OP1 A B 32 -2.483 -41.440 15.908 1.00 69.14 O
ATOM 27 OP2 A B 32 -4.510 -42.952 15.446 1.00 70.38 O
ATOM 28 O5' A B 32 -3.211 -41.957 13.565 1.00 69.47 O
TER
ATOM 2 P A A 70 3.010 -58.324 9.534 1.00 88.24 P
ATOM 3 OP1 A A 70 4.053 -59.334 9.264 1.00 90.00 O
ATOM 4 OP2 A A 70 2.844 -57.810 10.915 1.00 87.07 O
ATOM 5 O5' A A 70 3.260 -57.087 8.548 1.00 86.28 O
ATOM 6 C5' A A 70 3.391 -57.264 7.143 1.00 86.16 C
ATOM 7 C4' A A 70 3.092 -55.971 6.408 1.00 84.45 C
ATOM 8 O4' A A 70 1.738 -55.528 6.698 1.00 83.62 O
ATOM 9 C3' A A 70 3.961 -54.794 6.813 1.00 82.49 C
ATOM 10 O3' A A 70 5.171 -54.786 6.092 1.00 83.54 O
ATOM 11 C2' A A 70 3.079 -53.617 6.430 1.00 81.13 C
ATOM 12 O2' A A 70 3.071 -53.368 5.039 1.00 81.51 O
ATOM 13 C1' A A 70 1.719 -54.122 6.903 1.00 81.42 C
ATOM 14 N9 A A 70 1.454 -53.805 8.315 1.00 79.43 N
ATOM 15 C8 A A 70 1.372 -54.690 9.356 1.00 79.45 C
ATOM 16 N7 A A 70 1.137 -54.135 10.519 1.00 78.11 N
ATOM 17 C5 A A 70 1.056 -52.785 10.230 1.00 76.59 C
ATOM 18 C6 A A 70 0.820 -51.654 11.043 1.00 74.87 C
ATOM 19 N6 A A 70 0.620 -51.735 12.363 1.00 74.02 N
ATOM 20 N1 A A 70 0.802 -50.437 10.450 1.00 74.00 N
ATOM 21 C2 A A 70 1.006 -50.369 9.126 1.00 74.76 C
ATOM 22 N3 A A 70 1.237 -51.360 8.260 1.00 76.09 N
ATOM 23 C4 A A 70 1.250 -52.558 8.876 1.00 77.25 C
ATOM 24 P G A 71 6.528 -54.438 6.864 1.00 83.13 P
ATOM 25 OP1 G A 71 7.636 -54.473 5.881 1.00 83.60 O
ATOM 26 OP2 G A 71 6.570 -55.280 8.083 1.00 83.17 O
ATOM 27 O5' G A 71 6.322 -52.922 7.324 1.00 81.35 O
TER
ATOM 1 O3' C B 30 0.897 -45.246 20.674 1.00 71.22 O
ATOM 2 P G B 31 -0.688 -45.271 20.473 1.00 71.26 P
ATOM 3 OP1 G B 31 -1.236 -44.045 21.095 1.00 70.54 O
ATOM 4 OP2 G B 31 -1.194 -46.604 20.882 1.00 72.09 O
ATOM 5 O5' G B 31 -0.860 -45.179 18.888 1.00 70.79 O
ATOM 6 C5' G B 31 -0.430 -44.039 18.160 1.00 69.96 C
ATOM 7 C4' G B 31 -0.537 -44.320 16.673 1.00 70.00 C
ATOM 8 O4' G B 31 0.175 -45.543 16.334 1.00 70.58 O
ATOM 9 C3' G B 31 -1.970 -44.501 16.184 1.00 70.08 C
ATOM 10 O3' G B 31 -2.177 -43.723 15.021 1.00 70.31 O
ATOM 11 C2' G B 31 -2.049 -45.989 15.871 1.00 71.13 C
ATOM 12 O2' G B 31 -2.986 -46.298 14.857 1.00 71.51 O
ATOM 13 C1' G B 31 -0.618 -46.256 15.408 1.00 71.36 C
ATOM 14 N9 G B 31 -0.291 -47.682 15.375 1.00 72.37 N
ATOM 15 C8 G B 31 -0.047 -48.417 14.242 1.00 73.14 C
ATOM 16 N7 G B 31 0.205 -49.674 14.473 1.00 74.21 N
ATOM 17 C5 G B 31 0.116 -49.787 15.852 1.00 74.24 C
ATOM 18 C6 G B 31 0.287 -50.921 16.683 1.00 75.36 C
ATOM 19 O6 G B 31 0.563 -52.079 16.340 1.00 76.84 O
ATOM 20 N1 G B 31 0.115 -50.621 18.035 1.00 75.02 N
ATOM 21 C2 G B 31 -0.190 -49.372 18.521 1.00 73.96 C
ATOM 22 N2 G B 31 -0.321 -49.264 19.852 1.00 74.20 N
ATOM 23 N3 G B 31 -0.359 -48.301 17.750 1.00 73.09 N
ATOM 24 C4 G B 31 -0.192 -48.573 16.428 1.00 73.12 C
ATOM 25 P A B 32 -3.160 -42.468 15.080 1.00 69.96 P
ATOM 26 OP1 A B 32 -2.483 -41.440 15.908 1.00 69.14 O
ATOM 27 OP2 A B 32 -4.510 -42.952 15.446 1.00 70.38 O
ATOM 28 O5' A B 32 -3.211 -41.957 13.565 1.00 69.47 O
TER
Atoms:
OP1: (4.053,-59.334,9.264)
OP2: (2.844,-57.810,10.915)
C3': (3.961,-54.794,6.813)
C1': (1.719,-54.122,6.903)
C5': (3.391,-57.264,7.143)
O4': (1.738,-55.528,6.698)
C8: (1.372,-54.690,9.356)
O2': (3.071,-53.368,5.039)
C6: (0.820,-51.654,11.043)
C5: (1.056,-52.785,10.230)
C4: (1.250,-52.558,8.876)
P: (3.010,-58.324,9.534)
C4': (3.092,-55.971,6.408)
C2': (3.079,-53.617,6.430)
C2: (1.006,-50.369,9.126)
N1: (0.802,-50.437,10.450)
N3: (1.237,-51.360,8.260)
N6: (0.620,-51.735,12.363)
N7: (1.137,-54.135,10.519)
N9: (1.454,-53.805,8.315)
O5': (3.260,-57.087,8.548)
O3': (5.171,-54.786,6.092)
OP2: (2.844,-57.810,10.915)
C3': (3.961,-54.794,6.813)
C1': (1.719,-54.122,6.903)
C5': (3.391,-57.264,7.143)
O4': (1.738,-55.528,6.698)
C8: (1.372,-54.690,9.356)
O2': (3.071,-53.368,5.039)
C6: (0.820,-51.654,11.043)
C5: (1.056,-52.785,10.230)
C4: (1.250,-52.558,8.876)
P: (3.010,-58.324,9.534)
C4': (3.092,-55.971,6.408)
C2': (3.079,-53.617,6.430)
C2: (1.006,-50.369,9.126)
N1: (0.802,-50.437,10.450)
N3: (1.237,-51.360,8.260)
N6: (0.620,-51.735,12.363)
N7: (1.137,-54.135,10.519)
N9: (1.454,-53.805,8.315)
O5': (3.260,-57.087,8.548)
O3': (5.171,-54.786,6.092)
OP1: (-1.236,-44.045,21.095)
OP2: (-1.194,-46.604,20.882)
C3': (-1.970,-44.501,16.184)
C1': (-0.618,-46.256,15.408)
C5': (-0.430,-44.039,18.160)
O6: (0.563,-52.079,16.340)
O4': (0.175,-45.543,16.334)
C8: (-0.047,-48.417,14.242)
C2: (-0.190,-49.372,18.521)
C6: (0.287,-50.921,16.683)
C5: (0.116,-49.787,15.852)
C4: (-0.192,-48.573,16.428)
P: (-0.688,-45.271,20.473)
C4': (-0.537,-44.320,16.673)
C2': (-2.049,-45.989,15.871)
O2': (-2.986,-46.298,14.857)
N1: (0.115,-50.621,18.035)
N2: (-0.321,-49.264,19.852)
N3: (-0.359,-48.301,17.750)
N7: (0.205,-49.674,14.473)
N9: (-0.291,-47.682,15.375)
O5': (-0.860,-45.179,18.888)
O3': (-2.177,-43.723,15.021)
OP2: (-1.194,-46.604,20.882)
C3': (-1.970,-44.501,16.184)
C1': (-0.618,-46.256,15.408)
C5': (-0.430,-44.039,18.160)
O6: (0.563,-52.079,16.340)
O4': (0.175,-45.543,16.334)
C8: (-0.047,-48.417,14.242)
C2: (-0.190,-49.372,18.521)
C6: (0.287,-50.921,16.683)
C5: (0.116,-49.787,15.852)
C4: (-0.192,-48.573,16.428)
P: (-0.688,-45.271,20.473)
C4': (-0.537,-44.320,16.673)
C2': (-2.049,-45.989,15.871)
O2': (-2.986,-46.298,14.857)
N1: (0.115,-50.621,18.035)
N2: (-0.321,-49.264,19.852)
N3: (-0.359,-48.301,17.750)
N7: (0.205,-49.674,14.473)
N9: (-0.291,-47.682,15.375)
O5': (-0.860,-45.179,18.888)
O3': (-2.177,-43.723,15.021)
Image (generated by PyMOL):