ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXE:B70:B31

Extra

PDB:
ATOM 1 O3' C A 69 -4.893 -20.955 34.885 1.00 64.08 O
ATOM 2 P A A 70 -5.544 -22.317 35.413 1.00 63.42 P
ATOM 3 OP1 A A 70 -5.873 -22.152 36.846 1.00 63.77 O
ATOM 4 OP2 A A 70 -4.674 -23.443 35.009 1.00 62.88 O
ATOM 5 O5' A A 70 -6.893 -22.405 34.556 1.00 63.19 O
ATOM 6 C5' A A 70 -7.945 -21.458 34.714 1.00 63.30 C
ATOM 7 C4' A A 70 -8.994 -21.642 33.632 1.00 63.03 C
ATOM 8 O4' A A 70 -8.374 -21.492 32.327 1.00 63.03 O
ATOM 9 C3' A A 70 -9.660 -23.012 33.594 1.00 62.22 C
ATOM 10 O3' A A 70 -10.783 -23.076 34.467 1.00 62.04 O
ATOM 11 C2' A A 70 -10.081 -23.094 32.133 1.00 62.42 C
ATOM 12 O2' A A 70 -11.260 -22.361 31.855 1.00 63.06 O
ATOM 13 C1' A A 70 -8.870 -22.477 31.434 1.00 62.76 C
ATOM 14 N9 A A 70 -7.821 -23.463 31.132 1.00 62.33 N
ATOM 15 C8 A A 70 -6.564 -23.518 31.668 1.00 62.13 C
ATOM 16 N7 A A 70 -5.830 -24.511 31.229 1.00 61.66 N
ATOM 17 C5 A A 70 -6.659 -25.164 30.336 1.00 61.40 C
ATOM 18 C6 A A 70 -6.474 -26.309 29.529 1.00 60.96 C
ATOM 19 N6 A A 70 -5.340 -27.013 29.500 1.00 60.53 N
ATOM 20 N1 A A 70 -7.501 -26.711 28.750 1.00 61.16 N
ATOM 21 C2 A A 70 -8.637 -26.003 28.777 1.00 61.68 C
ATOM 22 N3 A A 70 -8.929 -24.914 29.494 1.00 62.03 N
ATOM 23 C4 A A 70 -7.890 -24.536 30.263 1.00 61.83 C
ATOM 24 P G A 71 -11.034 -24.358 35.404 1.00 61.57 P
ATOM 25 OP1 G A 71 -12.315 -24.150 36.118 1.00 61.97 O
ATOM 26 OP2 G A 71 -9.795 -24.637 36.167 1.00 60.91 O
ATOM 27 O5' G A 71 -11.220 -25.563 34.374 1.00 60.67 O
TER

ATOM 1 O3' C B 30 -0.855 -36.174 27.193 1.00 51.43 O
ATOM 2 P G B 31 -0.436 -35.284 25.936 1.00 51.03 P
ATOM 3 OP1 G B 31 -0.002 -36.202 24.858 1.00 50.94 O
ATOM 4 OP2 G B 31 0.456 -34.192 26.379 1.00 50.75 O
ATOM 5 O5' G B 31 -1.823 -34.601 25.534 1.00 51.24 O
ATOM 6 C5' G B 31 -2.928 -35.351 25.032 1.00 50.63 C
ATOM 7 C4' G B 31 -4.089 -34.413 24.758 1.00 50.61 C
ATOM 8 O4' G B 31 -4.360 -33.614 25.943 1.00 50.74 O
ATOM 9 C3' G B 31 -3.815 -33.415 23.637 1.00 50.77 C
ATOM 10 O3' G B 31 -4.973 -33.199 22.837 1.00 50.63 O
ATOM 11 C2' G B 31 -3.419 -32.171 24.425 1.00 51.10 C
ATOM 12 O2' G B 31 -3.557 -30.969 23.702 1.00 52.20 O
ATOM 13 C1' G B 31 -4.438 -32.260 25.547 1.00 51.41 C
ATOM 14 N9 G B 31 -4.196 -31.336 26.654 1.00 52.13 N
ATOM 15 C8 G B 31 -5.108 -30.440 27.155 1.00 52.71 C
ATOM 16 N7 G B 31 -4.655 -29.714 28.136 1.00 52.84 N
ATOM 17 C5 G B 31 -3.351 -30.155 28.299 1.00 52.75 C
ATOM 18 C6 G B 31 -2.362 -29.731 29.218 1.00 52.94 C
ATOM 19 O6 G B 31 -2.462 -28.860 30.091 1.00 53.15 O
ATOM 20 N1 G B 31 -1.166 -30.432 29.065 1.00 52.90 N
ATOM 21 C2 G B 31 -0.958 -31.417 28.129 1.00 52.55 C
ATOM 22 N2 G B 31 0.253 -31.984 28.117 1.00 52.85 N
ATOM 23 N3 G B 31 -1.874 -31.822 27.261 1.00 52.48 N
ATOM 24 C4 G B 31 -3.048 -31.152 27.397 1.00 52.38 C
ATOM 25 P A B 32 -4.801 -32.952 21.270 1.00 50.71 P
ATOM 26 OP1 A B 32 -4.540 -34.278 20.663 1.00 50.90 O
ATOM 27 OP2 A B 32 -3.862 -31.822 21.072 1.00 50.26 O
ATOM 28 O5' A B 32 -6.256 -32.513 20.777 1.00 51.60 O
TER

Atoms:
OP1: (-5.873,-22.152,36.846)
OP2: (-4.674,-23.443,35.009)
C3': (-9.660,-23.012,33.594)
C1': (-8.870,-22.477,31.434)
C5': (-7.945,-21.458,34.714)
O4': (-8.374,-21.492,32.327)
C8: (-6.564,-23.518,31.668)
O2': (-11.260,-22.361,31.855)
C6: (-6.474,-26.309,29.529)
C5: (-6.659,-25.164,30.336)
C4: (-7.890,-24.536,30.263)
P: (-5.544,-22.317,35.413)
C4': (-8.994,-21.642,33.632)
C2': (-10.081,-23.094,32.133)
C2: (-8.637,-26.003,28.777)
N1: (-7.501,-26.711,28.750)
N3: (-8.929,-24.914,29.494)
N6: (-5.340,-27.013,29.500)
N7: (-5.830,-24.511,31.229)
N9: (-7.821,-23.463,31.132)
O5': (-6.893,-22.405,34.556)
O3': (-10.783,-23.076,34.467)
OP1: (-0.002,-36.202,24.858)
OP2: (0.456,-34.192,26.379)
C3': (-3.815,-33.415,23.637)
C1': (-4.438,-32.260,25.547)
C5': (-2.928,-35.351,25.032)
O6: (-2.462,-28.860,30.091)
O4': (-4.360,-33.614,25.943)
C8: (-5.108,-30.440,27.155)
C2: (-0.958,-31.417,28.129)
C6: (-2.362,-29.731,29.218)
C5: (-3.351,-30.155,28.299)
C4: (-3.048,-31.152,27.397)
P: (-0.436,-35.284,25.936)
C4': (-4.089,-34.413,24.758)
C2': (-3.419,-32.171,24.425)
O2': (-3.557,-30.969,23.702)
N1: (-1.166,-30.432,29.065)
N2: (0.253,-31.984,28.117)
N3: (-1.874,-31.822,27.261)
N7: (-4.655,-29.714,28.136)
N9: (-4.196,-31.336,26.654)
O5': (-1.823,-34.601,25.534)
O3': (-4.973,-33.199,22.837)
Image (generated by PyMOL):
PyMOL image
show in jmol