Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2406:2389
Extra
PDB:
ATOM 1 O3' U A 405 -26.535 69.083 57.992 1.00 63.48 O
ATOM 2 P A A 406 -26.074 67.795 57.174 1.00 60.96 P
ATOM 3 OP1 A A 406 -24.808 68.151 56.501 1.00 61.19 O
ATOM 4 OP2 A A 406 -27.220 67.362 56.352 1.00 61.18 O
ATOM 5 O5' A A 406 -25.803 66.728 58.328 1.00 60.18 O
ATOM 6 C5' A A 406 -24.713 66.919 59.222 1.00 59.90 C
ATOM 7 C4' A A 406 -24.702 65.926 60.357 1.00 59.22 C
ATOM 8 O4' A A 406 -25.873 66.098 61.188 1.00 59.16 O
ATOM 9 C3' A A 406 -24.724 64.453 59.982 1.00 58.80 C
ATOM 10 O3' A A 406 -23.455 63.969 59.581 1.00 58.66 O
ATOM 11 C2' A A 406 -25.205 63.824 61.264 1.00 58.29 C
ATOM 12 O2' A A 406 -24.137 63.749 62.193 1.00 57.96 O
ATOM 13 C1' A A 406 -26.228 64.860 61.754 1.00 58.61 C
ATOM 14 N9 A A 406 -27.587 64.530 61.301 1.00 58.74 N
ATOM 15 C8 A A 406 -28.084 65.015 60.145 1.00 59.28 C
ATOM 16 N7 A A 406 -29.298 64.593 59.904 1.00 59.35 N
ATOM 17 C5 A A 406 -29.639 63.766 60.943 1.00 58.82 C
ATOM 18 C6 A A 406 -30.821 63.050 61.201 1.00 58.68 C
ATOM 19 N6 A A 406 -31.885 63.064 60.383 1.00 59.08 N
ATOM 20 N1 A A 406 -30.860 62.318 62.331 1.00 58.16 N
ATOM 21 C2 A A 406 -29.771 62.336 63.102 1.00 57.83 C
ATOM 22 N3 A A 406 -28.607 62.989 62.959 1.00 57.93 N
ATOM 23 C4 A A 406 -28.587 63.710 61.830 1.00 58.44 C
ATOM 24 P C A 407 -23.320 62.867 58.423 1.00 53.58 P
ATOM 25 OP1 C A 407 -22.063 63.144 57.724 1.00 53.81 O
ATOM 26 OP2 C A 407 -24.567 62.852 57.651 1.00 53.89 O
ATOM 27 O5' C A 407 -23.219 61.503 59.221 1.00 52.92 O
TER
ATOM 1 O3' G B 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 2 P G B 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 3 OP1 G B 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 4 OP2 G B 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 5 O5' G B 389 -36.210 54.969 65.559 1.00 65.67 O
ATOM 6 C5' G B 389 -36.190 56.227 66.185 1.00 65.85 C
ATOM 7 C4' G B 389 -34.803 56.536 66.637 1.00 65.58 C
ATOM 8 O4' G B 389 -33.879 56.472 65.516 1.00 65.62 O
ATOM 9 C3' G B 389 -34.578 57.903 67.185 1.00 65.80 C
ATOM 10 O3' G B 389 -35.062 58.027 68.481 1.00 65.69 O
ATOM 11 C2' G B 389 -33.081 58.002 67.107 1.00 65.58 C
ATOM 12 O2' G B 389 -32.514 57.149 68.079 1.00 65.09 O
ATOM 13 C1' G B 389 -32.828 57.386 65.736 1.00 65.64 C
ATOM 14 N9 G B 389 -32.846 58.412 64.676 1.00 66.14 N
ATOM 15 C8 G B 389 -31.820 59.281 64.381 1.00 66.29 C
ATOM 16 N7 G B 389 -32.098 60.119 63.423 1.00 66.80 N
ATOM 17 C5 G B 389 -33.424 59.811 63.072 1.00 67.01 C
ATOM 18 C6 G B 389 -34.316 60.389 62.113 1.00 67.59 C
ATOM 19 O6 G B 389 -34.093 61.314 61.336 1.00 68.04 O
ATOM 20 N1 G B 389 -35.555 59.769 62.110 1.00 67.64 N
ATOM 21 C2 G B 389 -35.910 58.722 62.920 1.00 67.21 C
ATOM 22 N2 G B 389 -37.137 58.186 62.827 1.00 67.34 N
ATOM 23 N3 G B 389 -35.104 58.187 63.799 1.00 66.68 N
ATOM 24 C4 G B 389 -33.890 58.765 63.845 1.00 66.61 C
ATOM 25 P A B 390 -35.824 59.348 68.904 1.00 53.92 P
ATOM 26 OP1 A B 390 -36.387 59.113 70.255 1.00 53.75 O
ATOM 27 OP2 A B 390 -36.752 59.679 67.803 1.00 54.39 O
ATOM 28 O5' A B 390 -34.655 60.435 68.956 1.00 54.01 O
TER
ATOM 2 P A A 406 -26.074 67.795 57.174 1.00 60.96 P
ATOM 3 OP1 A A 406 -24.808 68.151 56.501 1.00 61.19 O
ATOM 4 OP2 A A 406 -27.220 67.362 56.352 1.00 61.18 O
ATOM 5 O5' A A 406 -25.803 66.728 58.328 1.00 60.18 O
ATOM 6 C5' A A 406 -24.713 66.919 59.222 1.00 59.90 C
ATOM 7 C4' A A 406 -24.702 65.926 60.357 1.00 59.22 C
ATOM 8 O4' A A 406 -25.873 66.098 61.188 1.00 59.16 O
ATOM 9 C3' A A 406 -24.724 64.453 59.982 1.00 58.80 C
ATOM 10 O3' A A 406 -23.455 63.969 59.581 1.00 58.66 O
ATOM 11 C2' A A 406 -25.205 63.824 61.264 1.00 58.29 C
ATOM 12 O2' A A 406 -24.137 63.749 62.193 1.00 57.96 O
ATOM 13 C1' A A 406 -26.228 64.860 61.754 1.00 58.61 C
ATOM 14 N9 A A 406 -27.587 64.530 61.301 1.00 58.74 N
ATOM 15 C8 A A 406 -28.084 65.015 60.145 1.00 59.28 C
ATOM 16 N7 A A 406 -29.298 64.593 59.904 1.00 59.35 N
ATOM 17 C5 A A 406 -29.639 63.766 60.943 1.00 58.82 C
ATOM 18 C6 A A 406 -30.821 63.050 61.201 1.00 58.68 C
ATOM 19 N6 A A 406 -31.885 63.064 60.383 1.00 59.08 N
ATOM 20 N1 A A 406 -30.860 62.318 62.331 1.00 58.16 N
ATOM 21 C2 A A 406 -29.771 62.336 63.102 1.00 57.83 C
ATOM 22 N3 A A 406 -28.607 62.989 62.959 1.00 57.93 N
ATOM 23 C4 A A 406 -28.587 63.710 61.830 1.00 58.44 C
ATOM 24 P C A 407 -23.320 62.867 58.423 1.00 53.58 P
ATOM 25 OP1 C A 407 -22.063 63.144 57.724 1.00 53.81 O
ATOM 26 OP2 C A 407 -24.567 62.852 57.651 1.00 53.89 O
ATOM 27 O5' C A 407 -23.219 61.503 59.221 1.00 52.92 O
TER
ATOM 1 O3' G B 388 -37.281 53.316 64.049 1.00 59.95 O
ATOM 2 P G B 389 -37.541 54.108 65.432 1.00 65.77 P
ATOM 3 OP1 G B 389 -37.565 53.077 66.512 1.00 65.32 O
ATOM 4 OP2 G B 389 -38.744 55.001 65.247 1.00 66.30 O
ATOM 5 O5' G B 389 -36.210 54.969 65.559 1.00 65.67 O
ATOM 6 C5' G B 389 -36.190 56.227 66.185 1.00 65.85 C
ATOM 7 C4' G B 389 -34.803 56.536 66.637 1.00 65.58 C
ATOM 8 O4' G B 389 -33.879 56.472 65.516 1.00 65.62 O
ATOM 9 C3' G B 389 -34.578 57.903 67.185 1.00 65.80 C
ATOM 10 O3' G B 389 -35.062 58.027 68.481 1.00 65.69 O
ATOM 11 C2' G B 389 -33.081 58.002 67.107 1.00 65.58 C
ATOM 12 O2' G B 389 -32.514 57.149 68.079 1.00 65.09 O
ATOM 13 C1' G B 389 -32.828 57.386 65.736 1.00 65.64 C
ATOM 14 N9 G B 389 -32.846 58.412 64.676 1.00 66.14 N
ATOM 15 C8 G B 389 -31.820 59.281 64.381 1.00 66.29 C
ATOM 16 N7 G B 389 -32.098 60.119 63.423 1.00 66.80 N
ATOM 17 C5 G B 389 -33.424 59.811 63.072 1.00 67.01 C
ATOM 18 C6 G B 389 -34.316 60.389 62.113 1.00 67.59 C
ATOM 19 O6 G B 389 -34.093 61.314 61.336 1.00 68.04 O
ATOM 20 N1 G B 389 -35.555 59.769 62.110 1.00 67.64 N
ATOM 21 C2 G B 389 -35.910 58.722 62.920 1.00 67.21 C
ATOM 22 N2 G B 389 -37.137 58.186 62.827 1.00 67.34 N
ATOM 23 N3 G B 389 -35.104 58.187 63.799 1.00 66.68 N
ATOM 24 C4 G B 389 -33.890 58.765 63.845 1.00 66.61 C
ATOM 25 P A B 390 -35.824 59.348 68.904 1.00 53.92 P
ATOM 26 OP1 A B 390 -36.387 59.113 70.255 1.00 53.75 O
ATOM 27 OP2 A B 390 -36.752 59.679 67.803 1.00 54.39 O
ATOM 28 O5' A B 390 -34.655 60.435 68.956 1.00 54.01 O
TER
Atoms:
OP1: (-24.808,68.151,56.501)
OP2: (-27.220,67.362,56.352)
C3': (-24.724,64.453,59.982)
C1': (-26.228,64.860,61.754)
C5': (-24.713,66.919,59.222)
O4': (-25.873,66.098,61.188)
C8: (-28.084,65.015,60.145)
O2': (-24.137,63.749,62.193)
C6: (-30.821,63.050,61.201)
C5: (-29.639,63.766,60.943)
C4: (-28.587,63.710,61.830)
P: (-26.074,67.795,57.174)
C4': (-24.702,65.926,60.357)
C2': (-25.205,63.824,61.264)
C2: (-29.771,62.336,63.102)
N1: (-30.860,62.318,62.331)
N3: (-28.607,62.989,62.959)
N6: (-31.885,63.064,60.383)
N7: (-29.298,64.593,59.904)
N9: (-27.587,64.530,61.301)
O5': (-25.803,66.728,58.328)
O3': (-23.455,63.969,59.581)
OP2: (-27.220,67.362,56.352)
C3': (-24.724,64.453,59.982)
C1': (-26.228,64.860,61.754)
C5': (-24.713,66.919,59.222)
O4': (-25.873,66.098,61.188)
C8: (-28.084,65.015,60.145)
O2': (-24.137,63.749,62.193)
C6: (-30.821,63.050,61.201)
C5: (-29.639,63.766,60.943)
C4: (-28.587,63.710,61.830)
P: (-26.074,67.795,57.174)
C4': (-24.702,65.926,60.357)
C2': (-25.205,63.824,61.264)
C2: (-29.771,62.336,63.102)
N1: (-30.860,62.318,62.331)
N3: (-28.607,62.989,62.959)
N6: (-31.885,63.064,60.383)
N7: (-29.298,64.593,59.904)
N9: (-27.587,64.530,61.301)
O5': (-25.803,66.728,58.328)
O3': (-23.455,63.969,59.581)
OP1: (-37.565,53.077,66.512)
OP2: (-38.744,55.001,65.247)
C3': (-34.578,57.903,67.185)
C1': (-32.828,57.386,65.736)
C5': (-36.190,56.227,66.185)
O6: (-34.093,61.314,61.336)
O4': (-33.879,56.472,65.516)
C8: (-31.820,59.281,64.381)
C2: (-35.910,58.722,62.920)
C6: (-34.316,60.389,62.113)
C5: (-33.424,59.811,63.072)
C4: (-33.890,58.765,63.845)
P: (-37.541,54.108,65.432)
C4': (-34.803,56.536,66.637)
C2': (-33.081,58.002,67.107)
O2': (-32.514,57.149,68.079)
N1: (-35.555,59.769,62.110)
N2: (-37.137,58.186,62.827)
N3: (-35.104,58.187,63.799)
N7: (-32.098,60.119,63.423)
N9: (-32.846,58.412,64.676)
O5': (-36.210,54.969,65.559)
O3': (-35.062,58.027,68.481)
OP2: (-38.744,55.001,65.247)
C3': (-34.578,57.903,67.185)
C1': (-32.828,57.386,65.736)
C5': (-36.190,56.227,66.185)
O6: (-34.093,61.314,61.336)
O4': (-33.879,56.472,65.516)
C8: (-31.820,59.281,64.381)
C2: (-35.910,58.722,62.920)
C6: (-34.316,60.389,62.113)
C5: (-33.424,59.811,63.072)
C4: (-33.890,58.765,63.845)
P: (-37.541,54.108,65.432)
C4': (-34.803,56.536,66.637)
C2': (-33.081,58.002,67.107)
O2': (-32.514,57.149,68.079)
N1: (-35.555,59.769,62.110)
N2: (-37.137,58.186,62.827)
N3: (-35.104,58.187,63.799)
N7: (-32.098,60.119,63.423)
N9: (-32.846,58.412,64.676)
O5': (-36.210,54.969,65.559)
O3': (-35.062,58.027,68.481)
Image (generated by PyMOL):