Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
420D:A10:B5
Extra
PDB:
ATOM 1 O3' A A 9 1.951 7.433 -3.400 1.00 50.03 O
ATOM 2 P A A 10 2.040 8.223 -4.796 1.00 49.32 P
ATOM 3 OP1 A A 10 1.424 7.381 -5.854 1.00 57.75 O
ATOM 4 OP2 A A 10 3.440 8.702 -4.956 1.00 51.09 O
ATOM 5 O5' A A 10 1.116 9.495 -4.569 1.00 46.70 O
ATOM 6 C5' A A 10 -0.254 9.336 -4.208 1.00 39.37 C
ATOM 7 C4' A A 10 -0.800 10.633 -3.687 1.00 39.09 C
ATOM 8 O4' A A 10 -0.064 11.014 -2.496 1.00 41.06 O
ATOM 9 C3' A A 10 -0.635 11.839 -4.592 1.00 36.48 C
ATOM 10 O3' A A 10 -1.646 11.879 -5.586 1.00 35.14 O
ATOM 11 C2' A A 10 -0.806 12.971 -3.592 1.00 37.92 C
ATOM 12 O2' A A 10 -2.165 13.122 -3.215 1.00 37.99 O
ATOM 13 C1' A A 10 0.002 12.429 -2.414 1.00 36.44 C
ATOM 14 N9 A A 10 1.408 12.822 -2.478 1.00 31.68 N
ATOM 15 C8 A A 10 2.483 12.082 -2.903 1.00 25.63 C
ATOM 16 N7 A A 10 3.628 12.722 -2.829 1.00 25.26 N
ATOM 17 C5 A A 10 3.281 13.967 -2.321 1.00 28.14 C
ATOM 18 C6 A A 10 4.045 15.108 -1.995 1.00 28.46 C
ATOM 19 N6 A A 10 5.369 15.177 -2.135 1.00 30.67 N
ATOM 20 N1 A A 10 3.391 16.188 -1.507 1.00 22.54 N
ATOM 21 C2 A A 10 2.062 16.115 -1.357 1.00 28.42 C
ATOM 22 N3 A A 10 1.235 15.100 -1.624 1.00 34.45 N
ATOM 23 C4 A A 10 1.916 14.044 -2.108 1.00 31.36 C
ATOM 24 P U A 11 -1.314 12.499 -7.030 1.00 36.06 P
ATOM 25 OP1 U A 11 -2.419 12.101 -7.937 1.00 45.82 O
ATOM 26 OP2 U A 11 0.087 12.156 -7.382 1.00 42.44 O
ATOM 27 O5' U A 11 -1.388 14.072 -6.811 1.00 33.21 O
TER
ATOM 1 O3' A B 4 8.336 25.699 -0.578 1.00 32.45 O
ATOM 2 P G B 5 7.938 25.255 0.912 1.00 30.73 P
ATOM 3 OP1 G B 5 8.042 26.469 1.755 1.00 38.64 O
ATOM 4 OP2 G B 5 8.693 24.041 1.296 1.00 31.78 O
ATOM 5 O5' G B 5 6.404 24.868 0.769 1.00 31.92 O
ATOM 6 C5' G B 5 5.812 23.859 1.589 1.00 24.99 C
ATOM 7 C4' G B 5 4.413 23.580 1.109 1.00 25.89 C
ATOM 8 O4' G B 5 4.472 23.002 -0.223 1.00 28.15 O
ATOM 9 C3' G B 5 3.639 22.557 1.914 1.00 29.27 C
ATOM 10 O3' G B 5 3.050 23.175 3.059 1.00 33.23 O
ATOM 11 C2' G B 5 2.593 22.108 0.905 1.00 28.01 C
ATOM 12 O2' G B 5 1.526 23.030 0.809 1.00 33.39 O
ATOM 13 C1' G B 5 3.427 22.057 -0.383 1.00 29.38 C
ATOM 14 N9 G B 5 4.015 20.732 -0.597 1.00 31.67 N
ATOM 15 C8 G B 5 3.326 19.586 -0.901 1.00 29.89 C
ATOM 16 N7 G B 5 4.092 18.534 -0.996 1.00 27.02 N
ATOM 17 C5 G B 5 5.370 19.012 -0.743 1.00 29.50 C
ATOM 18 C6 G B 5 6.611 18.322 -0.680 1.00 33.65 C
ATOM 19 O6 G B 5 6.823 17.115 -0.829 1.00 37.13 O
ATOM 20 N1 G B 5 7.671 19.183 -0.399 1.00 32.40 N
ATOM 21 C2 G B 5 7.555 20.532 -0.193 1.00 29.53 C
ATOM 22 N2 G B 5 8.707 21.178 0.074 1.00 27.16 N
ATOM 23 N3 G B 5 6.398 21.194 -0.244 1.00 31.16 N
ATOM 24 C4 G B 5 5.353 20.375 -0.516 1.00 32.08 C
ATOM 25 P U B 6 3.083 22.419 4.474 1.00 30.69 P
ATOM 26 OP1 U B 6 2.501 23.314 5.500 1.00 39.39 O
ATOM 27 OP2 U B 6 4.442 21.860 4.671 1.00 31.13 O
ATOM 28 O5' U B 6 2.082 21.203 4.271 1.00 30.17 O
TER
ATOM 2 P A A 10 2.040 8.223 -4.796 1.00 49.32 P
ATOM 3 OP1 A A 10 1.424 7.381 -5.854 1.00 57.75 O
ATOM 4 OP2 A A 10 3.440 8.702 -4.956 1.00 51.09 O
ATOM 5 O5' A A 10 1.116 9.495 -4.569 1.00 46.70 O
ATOM 6 C5' A A 10 -0.254 9.336 -4.208 1.00 39.37 C
ATOM 7 C4' A A 10 -0.800 10.633 -3.687 1.00 39.09 C
ATOM 8 O4' A A 10 -0.064 11.014 -2.496 1.00 41.06 O
ATOM 9 C3' A A 10 -0.635 11.839 -4.592 1.00 36.48 C
ATOM 10 O3' A A 10 -1.646 11.879 -5.586 1.00 35.14 O
ATOM 11 C2' A A 10 -0.806 12.971 -3.592 1.00 37.92 C
ATOM 12 O2' A A 10 -2.165 13.122 -3.215 1.00 37.99 O
ATOM 13 C1' A A 10 0.002 12.429 -2.414 1.00 36.44 C
ATOM 14 N9 A A 10 1.408 12.822 -2.478 1.00 31.68 N
ATOM 15 C8 A A 10 2.483 12.082 -2.903 1.00 25.63 C
ATOM 16 N7 A A 10 3.628 12.722 -2.829 1.00 25.26 N
ATOM 17 C5 A A 10 3.281 13.967 -2.321 1.00 28.14 C
ATOM 18 C6 A A 10 4.045 15.108 -1.995 1.00 28.46 C
ATOM 19 N6 A A 10 5.369 15.177 -2.135 1.00 30.67 N
ATOM 20 N1 A A 10 3.391 16.188 -1.507 1.00 22.54 N
ATOM 21 C2 A A 10 2.062 16.115 -1.357 1.00 28.42 C
ATOM 22 N3 A A 10 1.235 15.100 -1.624 1.00 34.45 N
ATOM 23 C4 A A 10 1.916 14.044 -2.108 1.00 31.36 C
ATOM 24 P U A 11 -1.314 12.499 -7.030 1.00 36.06 P
ATOM 25 OP1 U A 11 -2.419 12.101 -7.937 1.00 45.82 O
ATOM 26 OP2 U A 11 0.087 12.156 -7.382 1.00 42.44 O
ATOM 27 O5' U A 11 -1.388 14.072 -6.811 1.00 33.21 O
TER
ATOM 1 O3' A B 4 8.336 25.699 -0.578 1.00 32.45 O
ATOM 2 P G B 5 7.938 25.255 0.912 1.00 30.73 P
ATOM 3 OP1 G B 5 8.042 26.469 1.755 1.00 38.64 O
ATOM 4 OP2 G B 5 8.693 24.041 1.296 1.00 31.78 O
ATOM 5 O5' G B 5 6.404 24.868 0.769 1.00 31.92 O
ATOM 6 C5' G B 5 5.812 23.859 1.589 1.00 24.99 C
ATOM 7 C4' G B 5 4.413 23.580 1.109 1.00 25.89 C
ATOM 8 O4' G B 5 4.472 23.002 -0.223 1.00 28.15 O
ATOM 9 C3' G B 5 3.639 22.557 1.914 1.00 29.27 C
ATOM 10 O3' G B 5 3.050 23.175 3.059 1.00 33.23 O
ATOM 11 C2' G B 5 2.593 22.108 0.905 1.00 28.01 C
ATOM 12 O2' G B 5 1.526 23.030 0.809 1.00 33.39 O
ATOM 13 C1' G B 5 3.427 22.057 -0.383 1.00 29.38 C
ATOM 14 N9 G B 5 4.015 20.732 -0.597 1.00 31.67 N
ATOM 15 C8 G B 5 3.326 19.586 -0.901 1.00 29.89 C
ATOM 16 N7 G B 5 4.092 18.534 -0.996 1.00 27.02 N
ATOM 17 C5 G B 5 5.370 19.012 -0.743 1.00 29.50 C
ATOM 18 C6 G B 5 6.611 18.322 -0.680 1.00 33.65 C
ATOM 19 O6 G B 5 6.823 17.115 -0.829 1.00 37.13 O
ATOM 20 N1 G B 5 7.671 19.183 -0.399 1.00 32.40 N
ATOM 21 C2 G B 5 7.555 20.532 -0.193 1.00 29.53 C
ATOM 22 N2 G B 5 8.707 21.178 0.074 1.00 27.16 N
ATOM 23 N3 G B 5 6.398 21.194 -0.244 1.00 31.16 N
ATOM 24 C4 G B 5 5.353 20.375 -0.516 1.00 32.08 C
ATOM 25 P U B 6 3.083 22.419 4.474 1.00 30.69 P
ATOM 26 OP1 U B 6 2.501 23.314 5.500 1.00 39.39 O
ATOM 27 OP2 U B 6 4.442 21.860 4.671 1.00 31.13 O
ATOM 28 O5' U B 6 2.082 21.203 4.271 1.00 30.17 O
TER
Atoms:
OP1: (1.424,7.381,-5.854)
OP2: (3.440,8.702,-4.956)
C3': (-0.635,11.839,-4.592)
C1': (0.002,12.429,-2.414)
C5': (-0.254,9.336,-4.208)
O4': (-0.064,11.014,-2.496)
C8: (2.483,12.082,-2.903)
O2': (-2.165,13.122,-3.215)
C6: (4.045,15.108,-1.995)
C5: (3.281,13.967,-2.321)
C4: (1.916,14.044,-2.108)
P: (2.040,8.223,-4.796)
C4': (-0.800,10.633,-3.687)
C2': (-0.806,12.971,-3.592)
C2: (2.062,16.115,-1.357)
N1: (3.391,16.188,-1.507)
N3: (1.235,15.100,-1.624)
N6: (5.369,15.177,-2.135)
N7: (3.628,12.722,-2.829)
N9: (1.408,12.822,-2.478)
O5': (1.116,9.495,-4.569)
O3': (-1.646,11.879,-5.586)
OP2: (3.440,8.702,-4.956)
C3': (-0.635,11.839,-4.592)
C1': (0.002,12.429,-2.414)
C5': (-0.254,9.336,-4.208)
O4': (-0.064,11.014,-2.496)
C8: (2.483,12.082,-2.903)
O2': (-2.165,13.122,-3.215)
C6: (4.045,15.108,-1.995)
C5: (3.281,13.967,-2.321)
C4: (1.916,14.044,-2.108)
P: (2.040,8.223,-4.796)
C4': (-0.800,10.633,-3.687)
C2': (-0.806,12.971,-3.592)
C2: (2.062,16.115,-1.357)
N1: (3.391,16.188,-1.507)
N3: (1.235,15.100,-1.624)
N6: (5.369,15.177,-2.135)
N7: (3.628,12.722,-2.829)
N9: (1.408,12.822,-2.478)
O5': (1.116,9.495,-4.569)
O3': (-1.646,11.879,-5.586)
OP1: (8.042,26.469,1.755)
OP2: (8.693,24.041,1.296)
C3': (3.639,22.557,1.914)
C1': (3.427,22.057,-0.383)
C5': (5.812,23.859,1.589)
O6: (6.823,17.115,-0.829)
O4': (4.472,23.002,-0.223)
C8: (3.326,19.586,-0.901)
C2: (7.555,20.532,-0.193)
C6: (6.611,18.322,-0.680)
C5: (5.370,19.012,-0.743)
C4: (5.353,20.375,-0.516)
P: (7.938,25.255,0.912)
C4': (4.413,23.580,1.109)
C2': (2.593,22.108,0.905)
O2': (1.526,23.030,0.809)
N1: (7.671,19.183,-0.399)
N2: (8.707,21.178,0.074)
N3: (6.398,21.194,-0.244)
N7: (4.092,18.534,-0.996)
N9: (4.015,20.732,-0.597)
O5': (6.404,24.868,0.769)
O3': (3.050,23.175,3.059)
OP2: (8.693,24.041,1.296)
C3': (3.639,22.557,1.914)
C1': (3.427,22.057,-0.383)
C5': (5.812,23.859,1.589)
O6: (6.823,17.115,-0.829)
O4': (4.472,23.002,-0.223)
C8: (3.326,19.586,-0.901)
C2: (7.555,20.532,-0.193)
C6: (6.611,18.322,-0.680)
C5: (5.370,19.012,-0.743)
C4: (5.353,20.375,-0.516)
P: (7.938,25.255,0.912)
C4': (4.413,23.580,1.109)
C2': (2.593,22.108,0.905)
O2': (1.526,23.030,0.809)
N1: (7.671,19.183,-0.399)
N2: (8.707,21.178,0.074)
N3: (6.398,21.194,-0.244)
N7: (4.092,18.534,-0.996)
N9: (4.015,20.732,-0.597)
O5': (6.404,24.868,0.769)
O3': (3.050,23.175,3.059)
Image (generated by PyMOL):