Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A891:A890
Extra
PDB:
ATOM 1 O3' U A 890 39.818 113.987 73.213 1.00 25.97 O
ATOM 2 P U A 891 38.754 113.155 74.067 1.00 26.17 P
ATOM 3 OP1 U A 891 39.207 113.007 75.470 1.00 27.33 O
ATOM 4 OP2 U A 891 38.467 111.956 73.275 1.00 28.66 O
ATOM 5 O5' U A 891 37.432 114.032 74.016 1.00 25.91 O
ATOM 6 C5' U A 891 37.301 115.269 74.718 1.00 25.74 C
ATOM 7 C4' U A 891 36.314 116.167 74.004 1.00 27.21 C
ATOM 8 O4' U A 891 36.980 116.909 72.952 1.00 27.56 O
ATOM 9 C3' U A 891 35.112 115.488 73.358 1.00 26.70 C
ATOM 10 O3' U A 891 33.971 116.313 73.434 1.00 24.38 O
ATOM 11 C2' U A 891 35.512 115.411 71.897 1.00 27.61 C
ATOM 12 O2' U A 891 34.339 115.383 71.115 1.00 27.34 O
ATOM 13 C1' U A 891 36.306 116.711 71.730 1.00 28.49 C
ATOM 14 N1 U A 891 37.314 116.668 70.658 1.00 28.34 N
ATOM 15 C2 U A 891 37.017 117.284 69.467 1.00 28.99 C
ATOM 16 O2 U A 891 35.989 117.910 69.287 1.00 31.73 O
ATOM 17 N3 U A 891 37.972 117.153 68.488 1.00 29.26 N
ATOM 18 C4 U A 891 39.169 116.498 68.579 1.00 29.64 C
ATOM 19 O4 U A 891 39.838 116.322 67.561 1.00 29.07 O
ATOM 20 C5 U A 891 39.424 115.928 69.859 1.00 29.93 C
ATOM 21 C6 U A 891 38.507 116.027 70.828 1.00 29.16 C
ATOM 22 P C A 892 32.784 115.910 74.413 1.00 26.91 P
ATOM 23 OP1 C A 892 31.619 116.785 74.158 1.00 26.18 O
ATOM 24 OP2 C A 892 33.389 115.872 75.761 1.00 26.85 O
ATOM 25 O5' C A 892 32.421 114.431 73.954 1.00 29.47 O
TER
ATOM 1 O3' G B 889 43.483 116.590 77.409 1.00 28.66 O
ATOM 2 P U B 890 42.317 115.495 77.270 1.00 25.76 P
ATOM 3 OP1 U B 890 41.002 116.134 77.445 1.00 26.15 O
ATOM 4 OP2 U B 890 42.697 114.377 78.146 1.00 24.58 O
ATOM 5 O5' U B 890 42.468 115.004 75.766 1.00 24.97 O
ATOM 6 C5' U B 890 42.019 115.828 74.665 1.00 26.54 C
ATOM 7 C4' U B 890 42.005 115.035 73.372 1.00 26.93 C
ATOM 8 O4' U B 890 43.354 114.618 73.056 1.00 25.93 O
ATOM 9 C3' U B 890 41.207 113.741 73.384 1.00 27.08 C
ATOM 10 O3' U B 890 39.818 113.987 73.213 1.00 25.97 O
ATOM 11 C2' U B 890 41.867 112.929 72.271 1.00 26.69 C
ATOM 12 O2' U B 890 41.449 113.159 70.943 1.00 27.82 O
ATOM 13 C1' U B 890 43.321 113.366 72.407 1.00 26.36 C
ATOM 14 N1 U B 890 44.014 112.373 73.224 1.00 26.05 N
ATOM 15 C2 U B 890 44.376 111.218 72.598 1.00 27.79 C
ATOM 16 O2 U B 890 44.185 111.027 71.413 1.00 29.90 O
ATOM 17 N3 U B 890 44.958 110.281 73.410 1.00 28.20 N
ATOM 18 C4 U B 890 45.203 110.388 74.753 1.00 27.25 C
ATOM 19 O4 U B 890 45.625 109.410 75.360 1.00 28.93 O
ATOM 20 C5 U B 890 44.824 111.629 75.325 1.00 25.76 C
ATOM 21 C6 U B 890 44.261 112.560 74.558 1.00 25.13 C
ATOM 22 P U B 891 38.754 113.155 74.067 1.00 26.17 P
ATOM 23 OP1 U B 891 39.207 113.007 75.470 1.00 27.33 O
ATOM 24 OP2 U B 891 38.467 111.956 73.275 1.00 28.66 O
ATOM 25 O5' U B 891 37.432 114.032 74.016 1.00 25.91 O
TER
ATOM 2 P U A 891 38.754 113.155 74.067 1.00 26.17 P
ATOM 3 OP1 U A 891 39.207 113.007 75.470 1.00 27.33 O
ATOM 4 OP2 U A 891 38.467 111.956 73.275 1.00 28.66 O
ATOM 5 O5' U A 891 37.432 114.032 74.016 1.00 25.91 O
ATOM 6 C5' U A 891 37.301 115.269 74.718 1.00 25.74 C
ATOM 7 C4' U A 891 36.314 116.167 74.004 1.00 27.21 C
ATOM 8 O4' U A 891 36.980 116.909 72.952 1.00 27.56 O
ATOM 9 C3' U A 891 35.112 115.488 73.358 1.00 26.70 C
ATOM 10 O3' U A 891 33.971 116.313 73.434 1.00 24.38 O
ATOM 11 C2' U A 891 35.512 115.411 71.897 1.00 27.61 C
ATOM 12 O2' U A 891 34.339 115.383 71.115 1.00 27.34 O
ATOM 13 C1' U A 891 36.306 116.711 71.730 1.00 28.49 C
ATOM 14 N1 U A 891 37.314 116.668 70.658 1.00 28.34 N
ATOM 15 C2 U A 891 37.017 117.284 69.467 1.00 28.99 C
ATOM 16 O2 U A 891 35.989 117.910 69.287 1.00 31.73 O
ATOM 17 N3 U A 891 37.972 117.153 68.488 1.00 29.26 N
ATOM 18 C4 U A 891 39.169 116.498 68.579 1.00 29.64 C
ATOM 19 O4 U A 891 39.838 116.322 67.561 1.00 29.07 O
ATOM 20 C5 U A 891 39.424 115.928 69.859 1.00 29.93 C
ATOM 21 C6 U A 891 38.507 116.027 70.828 1.00 29.16 C
ATOM 22 P C A 892 32.784 115.910 74.413 1.00 26.91 P
ATOM 23 OP1 C A 892 31.619 116.785 74.158 1.00 26.18 O
ATOM 24 OP2 C A 892 33.389 115.872 75.761 1.00 26.85 O
ATOM 25 O5' C A 892 32.421 114.431 73.954 1.00 29.47 O
TER
ATOM 1 O3' G B 889 43.483 116.590 77.409 1.00 28.66 O
ATOM 2 P U B 890 42.317 115.495 77.270 1.00 25.76 P
ATOM 3 OP1 U B 890 41.002 116.134 77.445 1.00 26.15 O
ATOM 4 OP2 U B 890 42.697 114.377 78.146 1.00 24.58 O
ATOM 5 O5' U B 890 42.468 115.004 75.766 1.00 24.97 O
ATOM 6 C5' U B 890 42.019 115.828 74.665 1.00 26.54 C
ATOM 7 C4' U B 890 42.005 115.035 73.372 1.00 26.93 C
ATOM 8 O4' U B 890 43.354 114.618 73.056 1.00 25.93 O
ATOM 9 C3' U B 890 41.207 113.741 73.384 1.00 27.08 C
ATOM 10 O3' U B 890 39.818 113.987 73.213 1.00 25.97 O
ATOM 11 C2' U B 890 41.867 112.929 72.271 1.00 26.69 C
ATOM 12 O2' U B 890 41.449 113.159 70.943 1.00 27.82 O
ATOM 13 C1' U B 890 43.321 113.366 72.407 1.00 26.36 C
ATOM 14 N1 U B 890 44.014 112.373 73.224 1.00 26.05 N
ATOM 15 C2 U B 890 44.376 111.218 72.598 1.00 27.79 C
ATOM 16 O2 U B 890 44.185 111.027 71.413 1.00 29.90 O
ATOM 17 N3 U B 890 44.958 110.281 73.410 1.00 28.20 N
ATOM 18 C4 U B 890 45.203 110.388 74.753 1.00 27.25 C
ATOM 19 O4 U B 890 45.625 109.410 75.360 1.00 28.93 O
ATOM 20 C5 U B 890 44.824 111.629 75.325 1.00 25.76 C
ATOM 21 C6 U B 890 44.261 112.560 74.558 1.00 25.13 C
ATOM 22 P U B 891 38.754 113.155 74.067 1.00 26.17 P
ATOM 23 OP1 U B 891 39.207 113.007 75.470 1.00 27.33 O
ATOM 24 OP2 U B 891 38.467 111.956 73.275 1.00 28.66 O
ATOM 25 O5' U B 891 37.432 114.032 74.016 1.00 25.91 O
TER
Atoms:
C4: (39.169,116.498,68.579)
N3: (37.972,117.153,68.488)
OP1: (39.207,113.007,75.470)
OP2: (38.467,111.956,73.275)
C2: (37.017,117.284,69.467)
C1': (36.306,116.711,71.730)
C3': (35.112,115.488,73.358)
O5': (37.432,114.032,74.016)
O4': (36.980,116.909,72.952)
C5': (37.301,115.269,74.718)
P: (38.754,113.155,74.067)
C4': (36.314,116.167,74.004)
C2': (35.512,115.411,71.897)
O2': (34.339,115.383,71.115)
N1: (37.314,116.668,70.658)
O4: (39.838,116.322,67.561)
O2: (35.989,117.910,69.287)
C6: (38.507,116.027,70.828)
C5: (39.424,115.928,69.859)
O3': (33.971,116.313,73.434)
N3: (37.972,117.153,68.488)
OP1: (39.207,113.007,75.470)
OP2: (38.467,111.956,73.275)
C2: (37.017,117.284,69.467)
C1': (36.306,116.711,71.730)
C3': (35.112,115.488,73.358)
O5': (37.432,114.032,74.016)
O4': (36.980,116.909,72.952)
C5': (37.301,115.269,74.718)
P: (38.754,113.155,74.067)
C4': (36.314,116.167,74.004)
C2': (35.512,115.411,71.897)
O2': (34.339,115.383,71.115)
N1: (37.314,116.668,70.658)
O4: (39.838,116.322,67.561)
O2: (35.989,117.910,69.287)
C6: (38.507,116.027,70.828)
C5: (39.424,115.928,69.859)
O3': (33.971,116.313,73.434)
C4: (45.203,110.388,74.753)
N3: (44.958,110.281,73.410)
OP1: (41.002,116.134,77.445)
OP2: (42.697,114.377,78.146)
C2: (44.376,111.218,72.598)
C1': (43.321,113.366,72.407)
C3': (41.207,113.741,73.384)
O5': (42.468,115.004,75.766)
O4': (43.354,114.618,73.056)
C5': (42.019,115.828,74.665)
P: (42.317,115.495,77.270)
C4': (42.005,115.035,73.372)
C2': (41.867,112.929,72.271)
O2': (41.449,113.159,70.943)
N1: (44.014,112.373,73.224)
O4: (45.625,109.410,75.360)
O2: (44.185,111.027,71.413)
C6: (44.261,112.560,74.558)
C5: (44.824,111.629,75.325)
O3': (39.818,113.987,73.213)
N3: (44.958,110.281,73.410)
OP1: (41.002,116.134,77.445)
OP2: (42.697,114.377,78.146)
C2: (44.376,111.218,72.598)
C1': (43.321,113.366,72.407)
C3': (41.207,113.741,73.384)
O5': (42.468,115.004,75.766)
O4': (43.354,114.618,73.056)
C5': (42.019,115.828,74.665)
P: (42.317,115.495,77.270)
C4': (42.005,115.035,73.372)
C2': (41.867,112.929,72.271)
O2': (41.449,113.159,70.943)
N1: (44.014,112.373,73.224)
O4: (45.625,109.410,75.360)
O2: (44.185,111.027,71.413)
C6: (44.261,112.560,74.558)
C5: (44.824,111.629,75.325)
O3': (39.818,113.987,73.213)
Image (generated by PyMOL):