Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8V:O5:O4
Extra
PDB:
ATOM 1 O3' U A 4 0.001 -11.609 29.633 0.35 75.24 O
ATOM 2 P U A 5 -0.008 -11.311 28.053 1.00 77.51 P
ATOM 3 OP1 U A 5 -1.370 -10.926 27.608 0.61 80.87 O
ATOM 4 OP2 U A 5 0.664 -12.482 27.426 0.32 80.90 O
ATOM 5 O5' U A 5 0.946 -10.038 27.913 1.00 78.39 O
ATOM 6 C5' U A 5 0.477 -8.821 27.299 0.15 83.68 C
ATOM 7 C4' U A 5 1.306 -7.643 27.764 0.71 85.28 C
ATOM 8 O4' U A 5 1.115 -7.443 29.190 1.00 85.86 O
ATOM 9 C3' U A 5 2.812 -7.784 27.602 1.00 86.71 C
ATOM 10 O3' U A 5 3.253 -7.513 26.259 1.00 85.17 O
ATOM 11 C2' U A 5 3.347 -6.802 28.639 0.01 89.76 C
ATOM 12 O2' U A 5 3.357 -5.461 28.183 0.74 91.08 O
ATOM 13 C1' U A 5 2.314 -6.948 29.761 1.00 85.80 C
ATOM 14 N1 U A 5 2.710 -7.841 30.859 1.00 81.85 N
ATOM 15 C2 U A 5 3.517 -7.309 31.843 1.00 80.62 C
ATOM 16 O2 U A 5 3.961 -6.175 31.789 0.86 81.56 O
ATOM 17 N3 U A 5 3.789 -8.152 32.892 1.00 79.04 N
ATOM 18 C4 U A 5 3.355 -9.451 33.046 1.00 76.69 C
ATOM 19 O4 U A 5 3.546 -10.021 34.120 0.98 72.67 O
ATOM 20 C5 U A 5 2.566 -9.951 31.954 0.75 77.11 C
ATOM 21 C6 U A 5 2.277 -9.147 30.924 1.00 78.61 C
TER
ATOM 1 O3' U B 3 -5.595 -9.764 28.814 1.00 67.20 O
ATOM 2 P U B 4 -4.107 -9.138 28.702 1.00 64.94 P
ATOM 3 OP1 U B 4 -4.176 -7.661 28.680 1.00 57.58 O
ATOM 4 OP2 U B 4 -3.419 -9.841 27.591 0.67 69.86 O
ATOM 5 O5' U B 4 -3.430 -9.631 30.058 0.14 72.22 O
ATOM 6 C5' U B 4 -2.073 -9.279 30.412 1.00 64.78 C
ATOM 7 C4' U B 4 -1.430 -10.415 31.175 0.94 62.83 C
ATOM 8 O4' U B 4 -2.336 -10.844 32.229 1.00 56.71 O
ATOM 9 C3' U B 4 -1.220 -11.677 30.355 0.88 64.69 C
ATOM 10 O3' U B 4 0.001 -11.609 29.633 0.35 75.24 O
ATOM 11 C2' U B 4 -1.164 -12.748 31.435 0.43 60.90 C
ATOM 12 O2' U B 4 0.079 -12.781 32.107 0.94 57.57 O
ATOM 13 C1' U B 4 -2.240 -12.249 32.398 1.00 51.48 C
ATOM 14 N1 U B 4 -3.555 -12.845 32.130 0.94 47.30 N
ATOM 15 C2 U B 4 -3.820 -14.081 32.691 1.00 43.16 C
ATOM 16 O2 U B 4 -3.017 -14.680 33.385 0.81 51.28 O
ATOM 17 N3 U B 4 -5.061 -14.588 32.409 1.00 38.63 N
ATOM 18 C4 U B 4 -6.046 -13.998 31.644 1.00 40.50 C
ATOM 19 O4 U B 4 -7.125 -14.572 31.509 0.97 43.72 O
ATOM 20 C5 U B 4 -5.698 -12.724 31.095 1.00 38.83 C
ATOM 21 C6 U B 4 -4.494 -12.203 31.349 0.97 42.22 C
ATOM 22 P U B 5 -0.008 -11.311 28.053 1.00 77.51 P
ATOM 23 OP1 U B 5 -1.370 -10.926 27.608 0.61 80.87 O
ATOM 24 OP2 U B 5 0.664 -12.482 27.426 0.32 80.90 O
ATOM 25 O5' U B 5 0.946 -10.038 27.913 1.00 78.39 O
TER
ATOM 2 P U A 5 -0.008 -11.311 28.053 1.00 77.51 P
ATOM 3 OP1 U A 5 -1.370 -10.926 27.608 0.61 80.87 O
ATOM 4 OP2 U A 5 0.664 -12.482 27.426 0.32 80.90 O
ATOM 5 O5' U A 5 0.946 -10.038 27.913 1.00 78.39 O
ATOM 6 C5' U A 5 0.477 -8.821 27.299 0.15 83.68 C
ATOM 7 C4' U A 5 1.306 -7.643 27.764 0.71 85.28 C
ATOM 8 O4' U A 5 1.115 -7.443 29.190 1.00 85.86 O
ATOM 9 C3' U A 5 2.812 -7.784 27.602 1.00 86.71 C
ATOM 10 O3' U A 5 3.253 -7.513 26.259 1.00 85.17 O
ATOM 11 C2' U A 5 3.347 -6.802 28.639 0.01 89.76 C
ATOM 12 O2' U A 5 3.357 -5.461 28.183 0.74 91.08 O
ATOM 13 C1' U A 5 2.314 -6.948 29.761 1.00 85.80 C
ATOM 14 N1 U A 5 2.710 -7.841 30.859 1.00 81.85 N
ATOM 15 C2 U A 5 3.517 -7.309 31.843 1.00 80.62 C
ATOM 16 O2 U A 5 3.961 -6.175 31.789 0.86 81.56 O
ATOM 17 N3 U A 5 3.789 -8.152 32.892 1.00 79.04 N
ATOM 18 C4 U A 5 3.355 -9.451 33.046 1.00 76.69 C
ATOM 19 O4 U A 5 3.546 -10.021 34.120 0.98 72.67 O
ATOM 20 C5 U A 5 2.566 -9.951 31.954 0.75 77.11 C
ATOM 21 C6 U A 5 2.277 -9.147 30.924 1.00 78.61 C
TER
ATOM 1 O3' U B 3 -5.595 -9.764 28.814 1.00 67.20 O
ATOM 2 P U B 4 -4.107 -9.138 28.702 1.00 64.94 P
ATOM 3 OP1 U B 4 -4.176 -7.661 28.680 1.00 57.58 O
ATOM 4 OP2 U B 4 -3.419 -9.841 27.591 0.67 69.86 O
ATOM 5 O5' U B 4 -3.430 -9.631 30.058 0.14 72.22 O
ATOM 6 C5' U B 4 -2.073 -9.279 30.412 1.00 64.78 C
ATOM 7 C4' U B 4 -1.430 -10.415 31.175 0.94 62.83 C
ATOM 8 O4' U B 4 -2.336 -10.844 32.229 1.00 56.71 O
ATOM 9 C3' U B 4 -1.220 -11.677 30.355 0.88 64.69 C
ATOM 10 O3' U B 4 0.001 -11.609 29.633 0.35 75.24 O
ATOM 11 C2' U B 4 -1.164 -12.748 31.435 0.43 60.90 C
ATOM 12 O2' U B 4 0.079 -12.781 32.107 0.94 57.57 O
ATOM 13 C1' U B 4 -2.240 -12.249 32.398 1.00 51.48 C
ATOM 14 N1 U B 4 -3.555 -12.845 32.130 0.94 47.30 N
ATOM 15 C2 U B 4 -3.820 -14.081 32.691 1.00 43.16 C
ATOM 16 O2 U B 4 -3.017 -14.680 33.385 0.81 51.28 O
ATOM 17 N3 U B 4 -5.061 -14.588 32.409 1.00 38.63 N
ATOM 18 C4 U B 4 -6.046 -13.998 31.644 1.00 40.50 C
ATOM 19 O4 U B 4 -7.125 -14.572 31.509 0.97 43.72 O
ATOM 20 C5 U B 4 -5.698 -12.724 31.095 1.00 38.83 C
ATOM 21 C6 U B 4 -4.494 -12.203 31.349 0.97 42.22 C
ATOM 22 P U B 5 -0.008 -11.311 28.053 1.00 77.51 P
ATOM 23 OP1 U B 5 -1.370 -10.926 27.608 0.61 80.87 O
ATOM 24 OP2 U B 5 0.664 -12.482 27.426 0.32 80.90 O
ATOM 25 O5' U B 5 0.946 -10.038 27.913 1.00 78.39 O
TER
Atoms:
C4: (3.355,-9.451,33.046)
N3: (3.789,-8.152,32.892)
OP1: (-1.370,-10.926,27.608)
OP2: (0.664,-12.482,27.426)
C2: (3.517,-7.309,31.843)
C1': (2.314,-6.948,29.761)
C3': (2.812,-7.784,27.602)
O5': (0.946,-10.038,27.913)
O4': (1.115,-7.443,29.190)
C5': (0.477,-8.821,27.299)
P: (-0.008,-11.311,28.053)
C4': (1.306,-7.643,27.764)
C2': (3.347,-6.802,28.639)
O2': (3.357,-5.461,28.183)
N1: (2.710,-7.841,30.859)
O4: (3.546,-10.021,34.120)
O2: (3.961,-6.175,31.789)
C6: (2.277,-9.147,30.924)
C5: (2.566,-9.951,31.954)
O3': (3.253,-7.513,26.259)
N3: (3.789,-8.152,32.892)
OP1: (-1.370,-10.926,27.608)
OP2: (0.664,-12.482,27.426)
C2: (3.517,-7.309,31.843)
C1': (2.314,-6.948,29.761)
C3': (2.812,-7.784,27.602)
O5': (0.946,-10.038,27.913)
O4': (1.115,-7.443,29.190)
C5': (0.477,-8.821,27.299)
P: (-0.008,-11.311,28.053)
C4': (1.306,-7.643,27.764)
C2': (3.347,-6.802,28.639)
O2': (3.357,-5.461,28.183)
N1: (2.710,-7.841,30.859)
O4: (3.546,-10.021,34.120)
O2: (3.961,-6.175,31.789)
C6: (2.277,-9.147,30.924)
C5: (2.566,-9.951,31.954)
O3': (3.253,-7.513,26.259)
C4: (-6.046,-13.998,31.644)
N3: (-5.061,-14.588,32.409)
OP1: (-4.176,-7.661,28.680)
OP2: (-3.419,-9.841,27.591)
C2: (-3.820,-14.081,32.691)
C1': (-2.240,-12.249,32.398)
C3': (-1.220,-11.677,30.355)
O5': (-3.430,-9.631,30.058)
O4': (-2.336,-10.844,32.229)
C5': (-2.073,-9.279,30.412)
P: (-4.107,-9.138,28.702)
C4': (-1.430,-10.415,31.175)
C2': (-1.164,-12.748,31.435)
O2': (0.079,-12.781,32.107)
N1: (-3.555,-12.845,32.130)
O4: (-7.125,-14.572,31.509)
O2: (-3.017,-14.680,33.385)
C6: (-4.494,-12.203,31.349)
C5: (-5.698,-12.724,31.095)
O3': (0.001,-11.609,29.633)
N3: (-5.061,-14.588,32.409)
OP1: (-4.176,-7.661,28.680)
OP2: (-3.419,-9.841,27.591)
C2: (-3.820,-14.081,32.691)
C1': (-2.240,-12.249,32.398)
C3': (-1.220,-11.677,30.355)
O5': (-3.430,-9.631,30.058)
O4': (-2.336,-10.844,32.229)
C5': (-2.073,-9.279,30.412)
P: (-4.107,-9.138,28.702)
C4': (-1.430,-10.415,31.175)
C2': (-1.164,-12.748,31.435)
O2': (0.079,-12.781,32.107)
N1: (-3.555,-12.845,32.130)
O4: (-7.125,-14.572,31.509)
O2: (-3.017,-14.680,33.385)
C6: (-4.494,-12.203,31.349)
C5: (-5.698,-12.724,31.095)
O3': (0.001,-11.609,29.633)
Image (generated by PyMOL):