Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A34:A32
Extra
PDB:
ATOM 1 O3' U A 33 3.091 15.908 -1.719 1.00 21.98 O
ATOM 2 P U A 34 4.393 16.672 -1.154 1.00 24.27 P
ATOM 3 OP1 U A 34 4.112 18.081 -1.444 1.00 21.67 O
ATOM 4 OP2 U A 34 5.651 16.051 -1.658 1.00 22.02 O
ATOM 5 O5' U A 34 4.355 16.404 0.420 1.00 21.65 O
ATOM 6 C5' U A 34 3.224 16.736 1.195 1.00 22.80 C
ATOM 7 C4' U A 34 3.533 16.647 2.677 1.00 22.95 C
ATOM 8 O4' U A 34 3.474 15.273 3.129 1.00 24.98 O
ATOM 9 C3' U A 34 4.962 17.109 2.990 1.00 23.23 C
ATOM 10 O3' U A 34 4.958 17.936 4.127 1.00 22.14 O
ATOM 11 C2' U A 34 5.807 15.844 3.138 1.00 22.97 C
ATOM 12 O2' U A 34 6.804 15.917 4.151 1.00 21.66 O
ATOM 13 C1' U A 34 4.739 14.866 3.606 1.00 21.87 C
ATOM 14 N1 U A 34 4.895 13.418 3.466 1.00 20.97 N
ATOM 15 C2 U A 34 4.504 12.676 4.556 1.00 18.94 C
ATOM 16 O2 U A 34 4.042 13.182 5.570 1.00 19.40 O
ATOM 17 N3 U A 34 4.657 11.327 4.423 1.00 19.76 N
ATOM 18 C4 U A 34 5.143 10.659 3.335 1.00 19.27 C
ATOM 19 O4 U A 34 5.181 9.441 3.367 1.00 19.94 O
ATOM 20 C5 U A 34 5.533 11.493 2.231 1.00 19.78 C
ATOM 21 C6 U A 34 5.398 12.822 2.336 1.00 21.36 C
ATOM 22 P C A 35 6.149 18.965 4.371 1.00 25.95 P
ATOM 23 OP1 C A 35 5.898 20.166 3.536 1.00 23.44 O
ATOM 24 OP2 C A 35 7.459 18.286 4.288 1.00 25.26 O
ATOM 25 O5' C A 35 5.932 19.376 5.884 1.00 22.51 O
TER
ATOM 1 O3' G B 31 12.948 14.718 -3.148 1.00 15.95 O
ATOM 2 P U B 32 11.385 14.951 -3.517 1.00 19.08 P
ATOM 3 OP1 U B 32 11.197 14.163 -4.756 1.00 17.31 O
ATOM 4 OP2 U B 32 11.026 16.379 -3.510 1.00 17.84 O
ATOM 5 O5' U B 32 10.608 14.251 -2.313 1.00 18.59 O
ATOM 6 C5' U B 32 10.648 12.828 -2.158 1.00 16.76 C
ATOM 7 C4' U B 32 9.701 12.351 -1.061 1.00 16.21 C
ATOM 8 O4' U B 32 10.107 12.861 0.238 1.00 17.46 O
ATOM 9 C3' U B 32 8.276 12.864 -1.282 1.00 17.26 C
ATOM 10 O3' U B 32 7.372 11.850 -0.863 1.00 19.08 O
ATOM 11 C2' U B 32 8.151 14.098 -0.386 1.00 16.32 C
ATOM 12 O2' U B 32 6.881 14.327 0.178 1.00 17.79 O
ATOM 13 C1' U B 32 9.107 13.723 0.745 1.00 15.55 C
ATOM 14 N1 U B 32 9.692 14.810 1.530 1.00 16.06 N
ATOM 15 C2 U B 32 9.596 14.735 2.916 1.00 14.37 C
ATOM 16 O2 U B 32 9.141 13.791 3.505 1.00 16.51 O
ATOM 17 N3 U B 32 10.080 15.822 3.587 1.00 14.95 N
ATOM 18 C4 U B 32 10.653 16.933 3.042 1.00 13.66 C
ATOM 19 O4 U B 32 10.944 17.868 3.777 1.00 15.44 O
ATOM 20 C5 U B 32 10.761 16.919 1.612 1.00 15.07 C
ATOM 21 C6 U B 32 10.287 15.883 0.923 1.00 14.65 C
ATOM 22 P U B 33 6.564 10.960 -1.926 1.00 19.85 P
ATOM 23 OP1 U B 33 5.831 10.040 -1.031 1.00 17.53 O
ATOM 24 OP2 U B 33 7.437 10.406 -2.967 1.00 19.96 O
ATOM 25 O5' U B 33 5.542 12.008 -2.571 1.00 18.50 O
TER
ATOM 2 P U A 34 4.393 16.672 -1.154 1.00 24.27 P
ATOM 3 OP1 U A 34 4.112 18.081 -1.444 1.00 21.67 O
ATOM 4 OP2 U A 34 5.651 16.051 -1.658 1.00 22.02 O
ATOM 5 O5' U A 34 4.355 16.404 0.420 1.00 21.65 O
ATOM 6 C5' U A 34 3.224 16.736 1.195 1.00 22.80 C
ATOM 7 C4' U A 34 3.533 16.647 2.677 1.00 22.95 C
ATOM 8 O4' U A 34 3.474 15.273 3.129 1.00 24.98 O
ATOM 9 C3' U A 34 4.962 17.109 2.990 1.00 23.23 C
ATOM 10 O3' U A 34 4.958 17.936 4.127 1.00 22.14 O
ATOM 11 C2' U A 34 5.807 15.844 3.138 1.00 22.97 C
ATOM 12 O2' U A 34 6.804 15.917 4.151 1.00 21.66 O
ATOM 13 C1' U A 34 4.739 14.866 3.606 1.00 21.87 C
ATOM 14 N1 U A 34 4.895 13.418 3.466 1.00 20.97 N
ATOM 15 C2 U A 34 4.504 12.676 4.556 1.00 18.94 C
ATOM 16 O2 U A 34 4.042 13.182 5.570 1.00 19.40 O
ATOM 17 N3 U A 34 4.657 11.327 4.423 1.00 19.76 N
ATOM 18 C4 U A 34 5.143 10.659 3.335 1.00 19.27 C
ATOM 19 O4 U A 34 5.181 9.441 3.367 1.00 19.94 O
ATOM 20 C5 U A 34 5.533 11.493 2.231 1.00 19.78 C
ATOM 21 C6 U A 34 5.398 12.822 2.336 1.00 21.36 C
ATOM 22 P C A 35 6.149 18.965 4.371 1.00 25.95 P
ATOM 23 OP1 C A 35 5.898 20.166 3.536 1.00 23.44 O
ATOM 24 OP2 C A 35 7.459 18.286 4.288 1.00 25.26 O
ATOM 25 O5' C A 35 5.932 19.376 5.884 1.00 22.51 O
TER
ATOM 1 O3' G B 31 12.948 14.718 -3.148 1.00 15.95 O
ATOM 2 P U B 32 11.385 14.951 -3.517 1.00 19.08 P
ATOM 3 OP1 U B 32 11.197 14.163 -4.756 1.00 17.31 O
ATOM 4 OP2 U B 32 11.026 16.379 -3.510 1.00 17.84 O
ATOM 5 O5' U B 32 10.608 14.251 -2.313 1.00 18.59 O
ATOM 6 C5' U B 32 10.648 12.828 -2.158 1.00 16.76 C
ATOM 7 C4' U B 32 9.701 12.351 -1.061 1.00 16.21 C
ATOM 8 O4' U B 32 10.107 12.861 0.238 1.00 17.46 O
ATOM 9 C3' U B 32 8.276 12.864 -1.282 1.00 17.26 C
ATOM 10 O3' U B 32 7.372 11.850 -0.863 1.00 19.08 O
ATOM 11 C2' U B 32 8.151 14.098 -0.386 1.00 16.32 C
ATOM 12 O2' U B 32 6.881 14.327 0.178 1.00 17.79 O
ATOM 13 C1' U B 32 9.107 13.723 0.745 1.00 15.55 C
ATOM 14 N1 U B 32 9.692 14.810 1.530 1.00 16.06 N
ATOM 15 C2 U B 32 9.596 14.735 2.916 1.00 14.37 C
ATOM 16 O2 U B 32 9.141 13.791 3.505 1.00 16.51 O
ATOM 17 N3 U B 32 10.080 15.822 3.587 1.00 14.95 N
ATOM 18 C4 U B 32 10.653 16.933 3.042 1.00 13.66 C
ATOM 19 O4 U B 32 10.944 17.868 3.777 1.00 15.44 O
ATOM 20 C5 U B 32 10.761 16.919 1.612 1.00 15.07 C
ATOM 21 C6 U B 32 10.287 15.883 0.923 1.00 14.65 C
ATOM 22 P U B 33 6.564 10.960 -1.926 1.00 19.85 P
ATOM 23 OP1 U B 33 5.831 10.040 -1.031 1.00 17.53 O
ATOM 24 OP2 U B 33 7.437 10.406 -2.967 1.00 19.96 O
ATOM 25 O5' U B 33 5.542 12.008 -2.571 1.00 18.50 O
TER
Atoms:
C4: (5.143,10.659,3.335)
N3: (4.657,11.327,4.423)
OP1: (4.112,18.081,-1.444)
OP2: (5.651,16.051,-1.658)
C2: (4.504,12.676,4.556)
C1': (4.739,14.866,3.606)
C3': (4.962,17.109,2.990)
O5': (4.355,16.404,0.420)
O4': (3.474,15.273,3.129)
C5': (3.224,16.736,1.195)
P: (4.393,16.672,-1.154)
C4': (3.533,16.647,2.677)
C2': (5.807,15.844,3.138)
O2': (6.804,15.917,4.151)
N1: (4.895,13.418,3.466)
O4: (5.181,9.441,3.367)
O2: (4.042,13.182,5.570)
C6: (5.398,12.822,2.336)
C5: (5.533,11.493,2.231)
O3': (4.958,17.936,4.127)
N3: (4.657,11.327,4.423)
OP1: (4.112,18.081,-1.444)
OP2: (5.651,16.051,-1.658)
C2: (4.504,12.676,4.556)
C1': (4.739,14.866,3.606)
C3': (4.962,17.109,2.990)
O5': (4.355,16.404,0.420)
O4': (3.474,15.273,3.129)
C5': (3.224,16.736,1.195)
P: (4.393,16.672,-1.154)
C4': (3.533,16.647,2.677)
C2': (5.807,15.844,3.138)
O2': (6.804,15.917,4.151)
N1: (4.895,13.418,3.466)
O4: (5.181,9.441,3.367)
O2: (4.042,13.182,5.570)
C6: (5.398,12.822,2.336)
C5: (5.533,11.493,2.231)
O3': (4.958,17.936,4.127)
C4: (10.653,16.933,3.042)
N3: (10.080,15.822,3.587)
OP1: (11.197,14.163,-4.756)
OP2: (11.026,16.379,-3.510)
C2: (9.596,14.735,2.916)
C1': (9.107,13.723,0.745)
C3': (8.276,12.864,-1.282)
O5': (10.608,14.251,-2.313)
O4': (10.107,12.861,0.238)
C5': (10.648,12.828,-2.158)
P: (11.385,14.951,-3.517)
C4': (9.701,12.351,-1.061)
C2': (8.151,14.098,-0.386)
O2': (6.881,14.327,0.178)
N1: (9.692,14.810,1.530)
O4: (10.944,17.868,3.777)
O2: (9.141,13.791,3.505)
C6: (10.287,15.883,0.923)
C5: (10.761,16.919,1.612)
O3': (7.372,11.850,-0.863)
N3: (10.080,15.822,3.587)
OP1: (11.197,14.163,-4.756)
OP2: (11.026,16.379,-3.510)
C2: (9.596,14.735,2.916)
C1': (9.107,13.723,0.745)
C3': (8.276,12.864,-1.282)
O5': (10.608,14.251,-2.313)
O4': (10.107,12.861,0.238)
C5': (10.648,12.828,-2.158)
P: (11.385,14.951,-3.517)
C4': (9.701,12.351,-1.061)
C2': (8.151,14.098,-0.386)
O2': (6.881,14.327,0.178)
N1: (9.692,14.810,1.530)
O4: (10.944,17.868,3.777)
O2: (9.141,13.791,3.505)
C6: (10.287,15.883,0.923)
C5: (10.761,16.919,1.612)
O3': (7.372,11.850,-0.863)
Image (generated by PyMOL):