ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1UVM:E1:E2

Extra

PDB:
ATOM 1 P U A 1 42.909 20.031 38.015 1.00138.03 P
ATOM 2 OP1 U A 1 43.341 18.720 37.465 1.00139.00 O
ATOM 3 OP2 U A 1 41.458 20.267 38.271 1.00138.52 O
ATOM 4 O5' U A 1 43.695 20.230 39.389 1.00134.44 O
ATOM 5 C5' U A 1 43.315 21.218 40.332 1.00126.39 C
ATOM 6 C4' U A 1 44.415 22.238 40.473 1.00120.51 C
ATOM 7 O4' U A 1 44.846 22.657 39.155 1.00116.99 O
ATOM 8 C3' U A 1 44.022 23.496 41.228 1.00118.61 C
ATOM 9 O3' U A 1 44.198 23.313 42.648 1.00117.57 O
ATOM 10 C2' U A 1 44.813 24.621 40.550 1.00116.20 C
ATOM 11 O2' U A 1 46.019 24.995 41.182 1.00119.47 O
ATOM 12 C1' U A 1 45.074 24.051 39.147 1.00110.81 C
ATOM 13 N1 U A 1 46.326 24.347 38.447 1.00102.31 N
ATOM 14 C2 U A 1 46.276 24.914 37.193 1.00 98.88 C
ATOM 15 O2 U A 1 45.229 25.136 36.605 1.00 96.01 O
ATOM 16 N3 U A 1 47.508 25.200 36.651 1.00 96.03 N
ATOM 17 C4 U A 1 48.748 24.971 37.234 1.00 94.81 C
ATOM 18 O4 U A 1 49.763 25.309 36.644 1.00 95.79 O
ATOM 19 C5 U A 1 48.704 24.364 38.517 1.00 94.34 C
ATOM 20 C6 U A 1 47.528 24.075 39.062 1.00 97.47 C
ATOM 21 P U A 2 45.677 23.331 43.312 1.00115.87 P
ATOM 22 OP1 U A 2 46.658 22.874 42.284 1.00113.77 O
ATOM 23 OP2 U A 2 45.565 22.572 44.589 1.00117.42 O
ATOM 24 O5' U A 2 45.934 24.869 43.692 1.00109.45 O
TER

ATOM 1 O3' U B 1 44.198 23.313 42.648 1.00117.57 O
ATOM 2 P U B 2 45.677 23.331 43.312 1.00115.87 P
ATOM 3 OP1 U B 2 46.658 22.874 42.284 1.00113.77 O
ATOM 4 OP2 U B 2 45.565 22.572 44.589 1.00117.42 O
ATOM 5 O5' U B 2 45.934 24.869 43.692 1.00109.45 O
ATOM 6 C5' U B 2 47.159 25.288 44.310 1.00100.13 C
ATOM 7 C4' U B 2 48.224 25.399 43.257 1.00 97.46 C
ATOM 8 O4' U B 2 47.898 26.427 42.309 1.00 94.30 O
ATOM 9 C3' U B 2 49.690 25.695 43.574 1.00 97.52 C
ATOM 10 O3' U B 2 50.251 24.466 44.062 1.00 96.27 O
ATOM 11 C2' U B 2 50.253 26.210 42.221 1.00 96.07 C
ATOM 12 O2' U B 2 51.060 25.308 41.490 1.00102.34 O
ATOM 13 C1' U B 2 48.967 26.432 41.416 1.00 91.89 C
ATOM 14 N1 U B 2 48.793 27.401 40.332 1.00 82.13 N
ATOM 15 C2 U B 2 47.518 27.902 40.112 1.00 80.29 C
ATOM 16 O2 U B 2 46.608 27.816 40.923 1.00 77.32 O
ATOM 17 N3 U B 2 47.353 28.535 38.916 1.00 82.04 N
ATOM 18 C4 U B 2 48.317 28.769 37.960 1.00 84.45 C
ATOM 19 O4 U B 2 47.961 29.174 36.846 1.00 84.96 O
ATOM 20 C5 U B 2 49.648 28.338 38.329 1.00 80.02 C
ATOM 21 C6 U B 2 49.830 27.695 39.479 1.00 78.90 C
ATOM 22 P C B 3 51.746 24.009 43.673 1.00 97.71 P
ATOM 23 OP1 C B 3 51.730 23.400 42.330 1.00 98.36 O
ATOM 24 OP2 C B 3 52.180 23.192 44.830 1.00101.28 O
ATOM 25 O5' C B 3 52.644 25.332 43.642 1.00 97.66 O
TER

Atoms:
C4: (48.748,24.971,37.234)
N3: (47.508,25.200,36.651)
OP1: (43.341,18.720,37.465)
OP2: (41.458,20.267,38.271)
C2: (46.276,24.914,37.193)
C1': (45.074,24.051,39.147)
C3': (44.022,23.496,41.228)
O5': (43.695,20.230,39.389)
O4': (44.846,22.657,39.155)
C5': (43.315,21.218,40.332)
P: (42.909,20.031,38.015)
C4': (44.415,22.238,40.473)
C2': (44.813,24.621,40.550)
O2': (46.019,24.995,41.182)
N1: (46.326,24.347,38.447)
O4: (49.763,25.309,36.644)
O2: (45.229,25.136,36.605)
C6: (47.528,24.075,39.062)
C5: (48.704,24.364,38.517)
O3': (44.198,23.313,42.648)
C4: (48.317,28.769,37.960)
N3: (47.353,28.535,38.916)
OP1: (46.658,22.874,42.284)
OP2: (45.565,22.572,44.589)
C2: (47.518,27.902,40.112)
C1': (48.967,26.432,41.416)
C3': (49.690,25.695,43.574)
O5': (45.934,24.869,43.692)
O4': (47.898,26.427,42.309)
C5': (47.159,25.288,44.310)
P: (45.677,23.331,43.312)
C4': (48.224,25.399,43.257)
C2': (50.253,26.210,42.221)
O2': (51.060,25.308,41.490)
N1: (48.793,27.401,40.332)
O4: (47.961,29.174,36.846)
O2: (46.608,27.816,40.923)
C6: (49.830,27.695,39.479)
C5: (49.648,28.338,38.329)
O3': (50.251,24.466,44.062)
Image (generated by PyMOL):
PyMOL image
show in jmol