ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Y26:X36:X34

Extra

PDB:
ATOM 1 O3' U A 35 12.615 -23.126 14.595 1.00 56.48 O
ATOM 2 P U A 36 13.428 -24.055 13.572 1.00 60.05 P
ATOM 3 OP1 U A 36 12.914 -25.426 13.790 1.00 60.25 O
ATOM 4 OP2 U A 36 14.878 -23.771 13.699 1.00 59.65 O
ATOM 5 O5' U A 36 13.037 -23.581 12.097 1.00 56.98 O
ATOM 6 C5' U A 36 11.708 -23.258 11.698 1.00 56.81 C
ATOM 7 C4' U A 36 11.734 -22.775 10.257 1.00 56.62 C
ATOM 8 O4' U A 36 12.092 -21.374 10.246 1.00 54.77 O
ATOM 9 C3' U A 36 12.768 -23.446 9.345 1.00 56.17 C
ATOM 10 O3' U A 36 12.215 -23.786 8.068 1.00 59.65 O
ATOM 11 C2' U A 36 13.863 -22.392 9.212 1.00 55.41 C
ATOM 12 O2' U A 36 14.617 -22.575 8.034 1.00 55.96 O
ATOM 13 C1' U A 36 12.990 -21.143 9.173 1.00 55.40 C
ATOM 14 N1 U A 36 13.610 -19.804 9.462 1.00 55.23 N
ATOM 15 C2 U A 36 13.214 -18.711 8.727 1.00 55.35 C
ATOM 16 O2 U A 36 12.420 -18.776 7.814 1.00 56.34 O
ATOM 17 N3 U A 36 13.817 -17.524 9.072 1.00 56.94 N
ATOM 18 C4 U A 36 14.733 -17.315 10.106 1.00 56.07 C
ATOM 19 O4 U A 36 15.178 -16.184 10.320 1.00 54.44 O
ATOM 20 C5 U A 36 15.079 -18.497 10.843 1.00 55.20 C
ATOM 21 C6 U A 36 14.516 -19.659 10.511 1.00 56.44 C
ATOM 22 P C A 37 12.803 -25.086 7.352 1.00 59.70 P
ATOM 23 OP1 C A 37 12.345 -26.211 8.207 1.00 61.13 O
ATOM 24 OP2 C A 37 14.262 -24.906 7.156 1.00 58.82 O
ATOM 25 O5' C A 37 12.085 -25.158 5.931 1.00 61.13 O
TER

ATOM 1 O3' G B 33 22.444 -24.408 12.770 1.00 59.55 O
ATOM 2 P U B 34 21.118 -24.630 13.668 1.00 60.62 P
ATOM 3 OP1 U B 34 21.391 -24.258 15.061 1.00 64.28 O
ATOM 4 OP2 U B 34 20.487 -25.919 13.306 1.00 61.53 O
ATOM 5 O5' U B 34 20.237 -23.475 13.018 1.00 60.30 O
ATOM 6 C5' U B 34 20.537 -22.119 13.286 1.00 58.68 C
ATOM 7 C4' U B 34 19.527 -21.289 12.531 1.00 57.43 C
ATOM 8 O4' U B 34 19.581 -21.647 11.107 1.00 56.01 O
ATOM 9 C3' U B 34 18.089 -21.487 12.998 1.00 54.75 C
ATOM 10 O3' U B 34 17.406 -20.253 13.041 1.00 55.47 O
ATOM 11 C2' U B 34 17.529 -22.355 11.870 1.00 53.77 C
ATOM 12 O2' U B 34 16.134 -22.256 11.745 1.00 53.08 O
ATOM 13 C1' U B 34 18.255 -21.779 10.656 1.00 52.81 C
ATOM 14 N1 U B 34 18.193 -22.673 9.490 1.00 51.93 N
ATOM 15 C2 U B 34 17.772 -22.176 8.258 1.00 51.47 C
ATOM 16 O2 U B 34 17.493 -20.996 8.032 1.00 50.02 O
ATOM 17 N3 U B 34 17.733 -23.126 7.256 1.00 50.37 N
ATOM 18 C4 U B 34 18.051 -24.459 7.344 1.00 51.37 C
ATOM 19 O4 U B 34 17.961 -25.171 6.348 1.00 51.00 O
ATOM 20 C5 U B 34 18.452 -24.892 8.660 1.00 52.80 C
ATOM 21 C6 U B 34 18.513 -24.006 9.663 1.00 51.59 C
ATOM 22 P U B 35 17.246 -19.365 14.361 1.00 57.34 P
ATOM 23 OP1 U B 35 16.713 -18.035 13.953 1.00 57.85 O
ATOM 24 OP2 U B 35 18.474 -19.473 15.174 1.00 59.35 O
ATOM 25 O5' U B 35 16.099 -20.108 15.156 1.00 57.74 O
TER

Atoms:
C4: (14.733,-17.315,10.106)
N3: (13.817,-17.524,9.072)
OP1: (12.914,-25.426,13.790)
OP2: (14.878,-23.771,13.699)
C2: (13.214,-18.711,8.727)
C1': (12.990,-21.143,9.173)
C3': (12.768,-23.446,9.345)
O5': (13.037,-23.581,12.097)
O4': (12.092,-21.374,10.246)
C5': (11.708,-23.258,11.698)
P: (13.428,-24.055,13.572)
C4': (11.734,-22.775,10.257)
C2': (13.863,-22.392,9.212)
O2': (14.617,-22.575,8.034)
N1: (13.610,-19.804,9.462)
O4: (15.178,-16.184,10.320)
O2: (12.420,-18.776,7.814)
C6: (14.516,-19.659,10.511)
C5: (15.079,-18.497,10.843)
O3': (12.215,-23.786,8.068)
C4: (18.051,-24.459,7.344)
N3: (17.733,-23.126,7.256)
OP1: (21.391,-24.258,15.061)
OP2: (20.487,-25.919,13.306)
C2: (17.772,-22.176,8.258)
C1': (18.255,-21.779,10.656)
C3': (18.089,-21.487,12.998)
O5': (20.237,-23.475,13.018)
O4': (19.581,-21.647,11.107)
C5': (20.537,-22.119,13.286)
P: (21.118,-24.630,13.668)
C4': (19.527,-21.289,12.531)
C2': (17.529,-22.355,11.870)
O2': (16.134,-22.256,11.745)
N1: (18.193,-22.673,9.490)
O4: (17.961,-25.171,6.348)
O2: (17.493,-20.996,8.032)
C6: (18.513,-24.006,9.663)
C5: (18.452,-24.892,8.660)
O3': (17.406,-20.253,13.041)
Image (generated by PyMOL):
PyMOL image
show in jmol